BGIOSGA013766

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Revision as of 10:07, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013766| Description = Japonica Group Os03g0805300 (Os03g0805300) mRNA,| Definition = Oryza sativa Indica Group BGIOSGA013766, complete gene....")
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Gene Name

BGIOSGA013766

Description

Japonica Group Os03g0805300 (Os03g0805300) mRNA,

Definition

Oryza sativa Indica Group BGIOSGA013766, complete gene.

LocusTag

NM_001058162.1

Ensembl Transcript ID

BGIOSGA013766-TA

Ensembl Protein ID

BGIOSGA013766-PA

Length

3847

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:37978058..37981904

Sequence Coding Region

37978058..37978132,37978729..37978785,37979785..37979868,37979962..37980033,37980155..37980226
,37980398..37980438,37980904..37980970,37981060..37981251,37981334..37981423
,37981498..37981606,37981900..37981904

Genome Context

<gbrowseImage1> name=IndicaChromosome03:37978058..37981904 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:37978058..37981904 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCAGCCCCCATGGCGGCCTCGACGACCAGATCGAGCGCCTCATGCAGTGCAAGCCCCTCCCCGAGCCCGAGGTCAGAGCACTTTGCGAGAAGGCAAAAGAGATATTGATGGAGGAGAGCAACGTTCAACCTGTAAAGAGTCCTGTTACAATATGTGGTGATATTCATGGGCAGTTTCATGACCTTGCAGAACTGTTCCGAATCGGTGGAAAGTGCCCAGATACAAACTACTTGTTTATGGGAGATTACGTGGATCGTGGTTATTATTCTGTTGAAACTGTCACGCTTTTGGTGGCTTTAAAGGTTCGTTATCCTCAGCGAATTACTATTCTCAGAGGAAACCACGAAAGTCGACAGATCACTCAAGTTTATGGATTCTATGACGAGTGCTTAAGGAAGTACGGGAATGCAAATGTGTGGAAAACTTTTACAGATCTCTTCGATTACTTCCCCTTGACAGCATTGGTTGAGTCAGAAATATTTTGCCTGCATGGTGGATTATCGCCATCCATTGAGACACTTGATAACATACGTAACTTCGATCGTGTCCAAGAAGTTCCCCATGAAGGGCCCATGTGTGATCTTCTGTGGTCTGATCCAGACGATCGATGTGGTTGGGGTATTTCTCCTCGAGGTGCTGGATACACCTTCGGGCAGGATATATCAGAGCAGTTCAACCATACCAATAATTTAAGACTTATTGCTAGAGCTCACCAGTTGGTCATGGAGGGATTCAATTGGGCTCATGAGCAAAAAGTTGTTACCATATTTAGTGCACCTAATTATTGCTATCGCTGTGGGAACATGGCATCAATCTTGGAAGTTGATGATTGCCAGGGAGCATACATTCATCCAGTTTGA</cdnaseq>

Protein Sequence

<aaseq>MSSPHGGLDDQIERLMQCKPLPEPEVRALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKTFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLRLIARAHQLVMEGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCQGAYIHPV</aaseq>

Gene Sequence

<dnaseqindica>1..75#672..728#1728..1811#1905..1976#2098..2169#2341..2381#2847..2913#3003..3194#3277..3366#3441..3549#3843..3847#ATGAGCAGCCCCCATGGCGGCCTCGACGACCAGATCGAGCGCCTCATGCAGTGCAAGCCCCTCCCCGAGCCCGAGGTACCCACCACCCACACGGCCTGCTCTCCCTCTGCTGGCTGTTCGTTCTTCCTCCTCCTCCGCCGCCGCTCGACCTCGCGCTGTTGCTGTCTGTTCTTTCGGTTCGGGCGTGGCGGGTGTGGCCAGATCTGGCGGATTTGCGGGCCTTTCGGGGGAGATCGGGCCTCGGGTTGCGCTCGGCTCCATTTCGTTTTTTTTTTGTTGAAGAAAAAAAGTTTGCTCGGATTTTCGGTTGTTGTGATTTGGTGGAGCGAACGCTGTGTGTTTACTCTCCGGGTTGCAAAGCGACGAGGTTTGCATCTCACAGGATTAGATGCGGTGAGATGACGAAATTATTTTCTGTCTGAGGCCCCTGGCTTTTGCATGAAGTGCCAATGTTCTCTGGATGCTCGTCGTCAATGGCAGAATTTTGGCAGCTGGTTGAATTGTGAAAGAAAAAATGAGTCTTGGCAGGAAAATGTTTAGGGTGTTATTGGTCTTCCAAACCGATAGATTTATGCCTTTTGCCAAATTCACACCTCTCTCGATTAAATTCTTTCTGGTTAATTAGTGAGCCACCATAGATTTGCTCTCATTCTTGAGTATTTTTCGTACAGGTCAGAGCACTTTGCGAGAAGGCAAAAGAGATATTGATGGAGGAGAGCAACGTTCAAGTATGATATTTTACAGCTCTATGATGTCTTTCTTGATTCGCTAGGATTAGCCAGGATCTCATTTTTGGGCCTGCTTTTGTTCATCGCAGTATAATTTAGGTGGTAATAGTTAAGGGAAAACATCAGATCTATTTCTCATGAAAACTCAATGAAAAAGCCAACAATATCTTATATTCTTATGGCTTTTGAGACTAAGGTCATCTCTACCAGACTAGTCTTCTATGCTGTGATGGTGTCATCTGTTACAATACCTTGCATGGAAAACTTCCAAAATTTAGTTTGTCTAAATGTGCAATACTCCAGCTTGTTTTCTTGGATCACTTGCATGAAATGATGGTACTATTTGACTGACGAATTAGCTTCTATAGTCTTTGAAGTAATGGGAACCTATGAGCATGGTTTGTCTTTGACAAGGATGAATATTTCATGTTGGCAGTGCAACAATCACACTTCATTAATCTCTTAAATTTGTCATGGATCTTTGCTCAGATCACTAGAAATATTCATCTAGGATCAAATTCTTTTGTAAGTCAACCAGAAACGAAAAAAAAATTAAATTGTACATCAAACTTGGTTACAAAATATAATAATTAAAGAATAGAACAACAATAGCAAAATAAGTTGCGGGTAATCTAGAGGAAGTTGGGGTAGTCTTGAGACGAAACCCAGGTTGAACCACACAAGGATTTAGTCTTCAGATCATGTATATGCATGTCTCCTCGGAAAATTTTATTCTAGTTTCTTGTTCTGAATTTATGTAAATCCATAATATTGACAGAAGTACTTATATTTGGTTTTGTTCTGTATTATGTGTTGCATGGTATAGCCTTACAGGTTTTGTTTTGTTTTGAAACTGCCGTGCAAACGAAAGTTAAAGCAGCTTTATTTTGTATACTTTTAACTTACAGTGATTCCTTGAGATGGTTATGTGCCTCCCATATAATAAATTATGAATTCTTTTGTTGATAATTTAACATTTTCTTTGCCATGCTTCTGCAGCCTGTAAAGAGTCCTGTTACAATATGTGGTGATATTCATGGGCAGTTTCATGACCTTGCAGAACTGTTCCGAATCGGTGGAAAGGTATCAGTTGTATTTTCCTGTTCGTTGTCCCCTTTGCATATCTTGAGTCCATCAAACTTCAAATATATTTATGCTTTCTCTTCACTTTACCAGTGCCCAGATACAAACTACTTGTTTATGGGAGATTACGTGGATCGTGGTTATTATTCTGTTGAAACTGTCACGGTAAGAGTAGTTTAAGCATCAACATGGCTGATTATCATTTTGTTTTGGTGGGCACATTTAACTTACAAATACTTCTAAAATTAATAGTTCTTGATTTTAATGTATTCCTTTACAAAAACAGCTTTTGGTGGCTTTAAAGGTTCGTTATCCTCAGCGAATTACTATTCTCAGAGGAAACCACGAAAGTCGACAGGTATGTACTTTTTTTAAAATGCAGATTCTTGATGTTTGCTTACTGTCATTATATGAAAGTTAAAGCTTTTGTTGCATCTCTTCATTCTTTGTTATCCTTTCTGTGTACAACTGTACATGCTCACAAGTCACAACTGATGAACTGAATGATGCTTTTTGAATCATTTTGCAGATCACTCAAGTTTATGGATTCTATGACGAGTGCTTAAGGAAGTAAGTGCCTTTTGTTATGTGTTGTAACTAAAGTAAATTTGTTCTAGGCAAGCTTTTATCTAGTCTTGTTCTGATAAATGACAGCGGTGGTAAAATAATATGATCCATTAGTAACTAATTTACTTCTATATAATTTTATGATGGGTCAGCTTGGTCCATTGACCATTAAGGATATTTGTATCATTCATGTGTATAGTTGTTTGCAACTTGCAACTATTGTTACTAAGACATAAGATGAACCTACTGCAATGTTCTAAAAGGCCATTTTGTGCTGATAAAAATATAGTGATGAATCATGTGTAAAAAGGTATTTAGGCTATTTTTCAACAATTTGTTTCATACAATAAACTTCACTGCTGCTTGTATTATATCAATTACCTTTTTAATTTGAGACTGAAATTTATTCTCCCTTTTCTTGGTGAATTAAGCTTACAAGAACCGTTTTTTTTTCTGTATTTCTTGCAGGTACGGGAATGCAAATGTGTGGAAAACTTTTACAGATCTCTTCGATTACTTCCCCTTGACAGCATTGGTGTGTATTCAGCATTTTCATATGTATATGCCAACATCCTTCCCACATTATCTAGTGAATCTGACAGAAGCTGTTCATTTGTTCTGTAGGTTGAGTCAGAAATATTTTGCCTGCATGGTGGATTATCGCCATCCATTGAGACACTTGATAACATACGTAACTTCGATCGTGTCCAAGAAGTTCCCCATGAAGGGCCCATGTGTGATCTTCTGTGGTCTGATCCAGACGATCGATGTGGTTGGGGTATTTCTCCTCGAGGTGCTGGATACACCTTCGGGCAGGTAACATTTTATATAAGAAAAAGAATCTCTATATTTAGCTGTGCACCTCATGTTCATCGACTTATCAATTCTATCATTTCAGGATATATCAGAGCAGTTCAACCATACCAATAATTTAAGACTTATTGCTAGAGCTCACCAGTTGGTCATGGAGGGATTCAATTGGGCTCATGTAATTATCTCTACTTGAACTCAGTATTTTTGGTTTCCATACCGGTTCACTAACATTTTGCAAACACTGAACAGGAGCAAAAAGTTGTTACCATATTTAGTGCACCTAATTATTGCTATCGCTGTGGGAACATGGCATCAATCTTGGAAGTTGATGATTGCCAGGGAGCATACATTCATCCAGGTAATGGTTGAACATTCATTGACTTTTAGTTTATAGAAACAACTAAGACTATTAAGAAACATGCCCCTTCATGGTTTATAGAAACAACTAAGACTATAAGATACATGCCCCTTGCATGTGCCCCAGGGACAGGTGATTTGACTAATGAAACATGAATGCATGATTGGTACATGTTCTGCTTTTGCAACTCTCATTCTATGTGTTGGGTTCCCATTTTGCTTATGCCTTTGTGATCTGGCTCCACGGTTATTTTCTGTTGCACCTTATGAGCTATATGTTGTTTCATTCTGCAGTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013766

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA013766&oldid=58589"