Os12g0503200

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Revision as of 10:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0503200| Description = Similar to TRANSLATION INITIATION FACTOR IF-2P| Version = NM_001190035.1 GI:297729200 GeneID:9270871| Length = 4821 ...")
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Gene Name

Os12g0503200

Description

Similar to TRANSLATION INITIATION FACTOR IF-2P

Version

NM_001190035.1 GI:297729200 GeneID:9270871

Length

4821 bp

Definition

Oryza sativa Japonica Group Os12g0503200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19344054..19348874

Sequence Coding Region

19344056..19345231

Expression

GEO Profiles:Os12g0503200

Genome Context

<gbrowseImage1> name=NC_008405:19344054..19348874 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:19344054..19348874 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>acttcgactcgacgcgtattcccctcgccgccgtcgccgactcgccgtcgattcgccgccaccgttgccgccgcttcgcgcctagggtttcgtcgccggccgccgctgtatgagcagtcgccccatcgtcgccaacctggaccgtcaccaccaccaccaccgccccgatgtcgtcgtcgaggaagaccgcgggcccccgcggcggcggcggccgccgcagggacgaagaaggtgggtagtgggccgagccgggtgacgctggagaggctccgggaggggatcgagcggcgggcggaggaggaggagaggcgggcggaggaggagaggagggcggaggcggagagggccgccgcggaggagcgggcgaggcgggaggaggaggaggggagggcgcgggcggaggaggagaggaggcggagggaggaggagaggcggcggaggaggaaagaggagaaggtgagggaggaggcgcggcggagggaggagcagcggcggcggctcggcatcaccgtcgtcgctgattctcccggcggaggcggtgatggcgatcgtcgtcggcctgtgtacgactccaggaagactaaattgcaggccaagcctcatggggatgcccagtctgaagctgatacggcagaattgctgagctcgaagccgcaattggaggacgagcagatcaatgcattatctatcgaggttgctgctgccgcagacgcagtagaattgggagtgggaaggaaaactggatcatcagaagaggatggcactgttagtgatggtggtgatgattcttgtgaggacaagagcttggatggttttgatgtccaatctgatgggaattctccctgtgttgcagagggggaaacagaggacaaacttgcgacttctgcttcccaggttgttaatccagtcgatatcgatgtggctggtgaggttgaggaagatgggatccttgattctcaagatgcgtgtgcaatcgagggtgacagggtgctccgtgagacgatatgttgcatccttggccatgtggatgctggtaagacaaagctccttgattgcatcaggcacaccaatgtgcagaaaggggatgctggaggcatcacgcagcagattggcgctacctacgtacctgttgaatacgtcaaggagagggccaaaccccataaaggtgtgtcgtaa</cdnaseq>

Protein Sequence

<aaseq>TSTRRVFPSPPSPTRRRFAATVAAASRLGFRRRPPLYEQSPHRR QPGPSPPPPPPRCRRRGRPRAPAAAAAAAGTKKVGSGPSRVTLERLREGIERRAEEEE RRAEEERRAEAERAAAEERARREEEEGRARAEEERRRREEERRRRRKEEKVREEARRR EEQRRRLGITVVADSPGGGGDGDRRRPVYDSRKTKLQAKPHGDAQSEADTAELLSSKP QLEDEQINALSIEVAAAADAVELGVGRKTGSSEEDGTVSDGGDDSCEDKSLDGFDVQS DGNSPCVAEGETEDKLATSASQVVNPVDIDVAGEVEEDGILDSQDACAIEGDRVLRET ICCILGHVDAGKTKLLDCIRHTNVQKGDAGGITQQIGATYVPVEYVKERAKPHKGVS</aaseq>

Gene Sequence

<dnaseqindica>3..1178#acacttcgactcgacgcgtattcccctcgccgccgtcgccgactcgccgtcgattcgccgccaccgttgccgccgcttcgcgcctagggtttcgtcgccggccgccgctgtatgagcagtcgccccatcgtcgccaacctggaccgtcaccaccaccaccaccgccccgatgtcgtcgtcgaggaagaccgcgggcccccgcggcggcggcggccgccgcagggacgaagaaggtgggtagtgggccgagccgggtgacgctggagaggctccgggaggggatcgagcggcgggcggaggaggaggagaggcgggcggaggaggagaggagggcggaggcggagagggccgccgcggaggagcgggcgaggcgggaggaggaggaggggagggcgcgggcggaggaggagaggaggcggagggaggaggagaggcggcggaggaggaaagaggagaaggtgagggaggaggcgcggcggagggaggagcagcggcggcggctcggcatcaccgtcgtcgctgattctcccggcggaggcggtgatggcgatcgtcgtcggcctgtgtacgactccaggaagactaaattgcaggccaagcctcatggggatgcccagtctgaagctgatacggcagaattgctgagctcgaagccgcaattggaggacgagcagatcaatgcattatctatcgaggttgctgctgccgcagacgcagtagaattgggagtgggaaggaaaactggatcatcagaagaggatggcactgttagtgatggtggtgatgattcttgtgaggacaagagcttggatggttttgatgtccaatctgatgggaattctccctgtgttgcagagggggaaacagaggacaaacttgcgacttctgcttcccaggttgttaatccagtcgatatcgatgtggctggtgaggttgaggaagatgggatccttgattctcaagatgcgtgtgcaatcgagggtgacagggtgctccgtgagacgatatgttgcatccttggccatgtggatgctggtaagacaaagctccttgattgcatcaggcacaccaatgtgcagaaaggggatgctggaggcatcacgcagcagattggcgctacctacgtacctgttgaatacgtcaaggagagggccaaaccccataaaggtgtgtcgtaatcaaagttcctgggttgcttgtgattgacacccctggccacgagtcgttcagtaacatgcgctcgaggggaatgagtttgtgcgacattgctgtggtggttgttgacattatgcatgggcttgagaagcagactgttgagacccttgctcttctgaaagaccgcaatgtgaggttcattgttgtcttgaacaaggtagaccggctttgtgggtggaaacattgtccagatgcaccgataaagaaggcactcgagaaccaatctggtgatgtcaaaagggaatttgggtggaggttgactaaggtactggcaatgccattacattcattgatccaatatgtttcaatgcaaatattttctttgattttatttgacaatttgactcatctatctaaacaggttgtgacacaactgaaggaaaatggctttaacactgcactatactatgacaatcaaaagtttcggaaagtgtttgacatagtcccaaccagtgccataaggtatgtctgctatatgctttgacttttcttgtttattaggtttcattttcagttgttatatgtgatttgaggtttaccttttcctaacatatgctattccatcctccagcggtgaaggcattccagaccttctactaatgctggtgttaaggtcccaagcgacaatgatggagaagctaacctttgtcaatacagtggaggtttgtccactatccattactatgttaatctccattactctgtttaatatcgagttacttactagtttggatatgcaccatttatcaagatgttgaatgtgagattgacttcatgtttgtttgatcagtgtactgtcctagaagtcaatgatgacaaagatttaggaactactattgatgtagtgctgattaatggtgtgctgcacaaaggtgatcaagtgaatgtttgcactaaacaggtataataacttcttaaatttgagatttcataccccttgaatttttccacaacggtttgatctcataatcttaaacatttttcatcttcaggggcctgtcacaacaactattagagatttgttgacccctcatccattgaaagaactgagagttaaggtgagttaatgattgcactctcttttgacagttatagtttctgtacataagtttttaaaagaaagaaacaacatatgcaaatctagcaaatccccagaaggtaataaatgtatatgcccatgagagtgaaacagttcatcttgttaaaacatgcagtttatatgataagagaaatactgaatgttatcatcacttaggctgcgttcttttccacatctccataatacaactttctcgttttccgttagcacgcttcccaaattactaaatggtgtgttttgtgtaaaaaaaaatctatatagaagtttcctaaaaaagttcaaataaatatattttcatgtttataataatcaatactctattaatcatgcgctaatgaggtgcccccgttttgcgtcctgttaatatgctcctccaatatggaggttcaaatggacccttaggctgtgttcgggaggaggagaacccctcctccctagcgtgcaaaacgaagctcgtattattgcatgattaattattaactatttttttgaaaaatggattaatatgatattttaaaacaactttcatatagaaagtttttgcataaatcacaccgtttagcagtttgaaagcttgcctgcggaaaacgagagaggtgggttgggaaaatggggggaagaacacagccttaattattatgtggggttttgagcaaaaatgggccacctaagcatgtacagtatatatgaatttaattttaatatgtggcaagattatttgacagtatttgttgggtgtttatttaatttgtccacttctattctgcagggcatatataagcatcacaaggagcttaaagctgcacagggggtaaagattgtggcacgggtgagtttatttcagttgtcatgccttaaaaaaaagatccaatctcgaactaattgttgcttaactttatcttttcagggactgaaatatgcaattccaggcacttctctcgttgtagtgaagccaggggatgatctgggacaatctgaagccaaaagccagaggaatgagaatgaagagggaaatgtaatacaagaaataagtaggctcaaaacttgcaaggaaggtgtctatgtgcaagcttctacttttggaatcttggaagcaatcattgagcatttgaacagccctggtgtgaatgttcctgtcagtggttgcaacttaggcccaattgagaagaaagatgtcatgaaggcaagtgctatgctgaagcggaaagaagagtatgcagccatcttagcatttaatgtcagggtgatgcctgaggcagatgtccttgcatcagaatcaggagtgaagattgttacagctgacacagtgtacaagcttgttgacagctttaatgaacacattaaaagatcaaaggagttgaagaaaatgcagtgtgcagccaatgcagtgttcccatgcaccctgaagattctgccaaaccgtgtataccgtaagaaggatccatttctttgtgatgttgaagtcttggaaggtgtcgtcaaggtacttcttttagccttattattttgagtgaattctgttaaaatgataattatcctagatactgatgcataggcatttcgccacagtttgagttagcacaattaaactttacatgtcagcagtttggttcattggcttttagtcttggcctacttatcacggtcaatgacagtgcaaaaatatggtaccttgttattgcatccaaattgagcttcacaaaaagtgtggcatgctacaccttagaaataaacttgatggaaaatcttggcatctatccaaacctataaaagtttacaaatctggcgctattgcaataggtcacatatattactgctcatcattgattgtggtaattgcatttcaggtgggaacaccaatttgtgtctatgttggaggcacagtccatggtcttggaaggatctcctcaatgcaaacatcaaatggtaatcagattgattcggcaaagcgaggagtagtagtatccgtaaaggtatgaataacaaagatcgttaggataatttcagttatcaacaactaaatagaaaaagcctaacatacattttctccaccagataaccggggagagccccaaggagaagacctggttgtatggacgccattttgatgagagcaatgagctgatcagccaaatctcaaggagatccattgatgtcctcaaagagtactatcgagtaagatacataaccacagccatttccatttatcttgcagagcccttaacacgtgcatctaatttttgtgaattcaccttgctgcaggatgaaatgaatgatgagaattggcagcttatccgcaggctaaagaaactactcgatatagcctgaaggattggaatacttctgtcgtcttctcgtgtcggcaatttagatcacgttcatcattttctggtctgtgttgtgtccagaaactccagtcatactttgtcatcatttgtcaaaccgttttgttactttgtgaataatggatgaatctatagatgtttgtaatggcgaatattgtcgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0503200, RefSeq:Os12g0503200