Os09g0386600

From RiceWiki
Revision as of 07:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0386600| Description = Conserved hypothetical protein| Version = NM_001069611.1 GI:115478964 GeneID:4346951| Length = 4346 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0386600

Description

Conserved hypothetical protein

Version

NM_001069611.1 GI:115478964 GeneID:4346951

Length

4346 bp

Definition

Oryza sativa Japonica Group Os09g0386600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:13790073..13794418

Sequence Coding Region

13790230..13790382,13790778..13790910,13791541..13791745,13792034..13792193,13792326..13792511
,13792905..13793114,13793633..13793683

Expression

GEO Profiles:Os09g0386600

Genome Context

<gbrowseImage1> name=NC_008402:13790073..13794418 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:13790073..13794418 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctactgggaacacctcacagaacatgactaacagcagacacttggagctcgatgtttgggcgaaggaaagagaagttgctgggttaaaggcaagcttgaatacactgacttctgaggtacagcgtctgtacaagttatgtgctgagtggaaagaagcggaagattccttgaagaaaaagtggaagaaaatagaagaatttgatgctcgtagatcagaacttgagtgcatttacaatgctcttctgcgggccaatatggaggcatcaacattttgggagcaacagccattatctgcaagaggatatgcgtcaagaacaatcatccctgcttgtaatgctgtggtagacatgtcaactaactcaagggatctcatcgagcgagaattgtctgcgtttggtcagagcttggataacagcttatgcaggttgccagcaactcctcaggctcttttggaggctttgggctccaatggtgctacaggatcagaagcagttgcagctgcagagaaacatgctgctttgttaactgcacgagctggagccagagatccatctgctgtgccatccatatgccgcatctctactgctcttcagtacaattctgtttcaccaggtacagaaggcactgattctggcttggcatcagttctaaattcactggagttctgcctaaaaccttgtggttctgaagctagtatactagaggatttatcaaaggctattaatttggtgcacacgcggagaaatctggttgagaatgatcgtgttttgctgaaccgagcacatcgtgctcaacaggaatatgaaagggtggccaactactgtcttaaattagctggtgaacaagaaaagatggtatcagaaaggtggttgccagaactgagaaacgcagttcaagaggctcaaaggtgttttgaggattgccgacgtgttaggggtttggttgacgaatggtatgaacaaccagcagcaacagtcgttgactgggtgacaatagacgggcaaagcgttggtgcctggatcaacctcgtaaagcaactccacatggaaatctccagaagaacgcttgccatatccacggcaggcgacgactaa</cdnaseq>

Protein Sequence

<aaseq>MPTGNTSQNMTNSRHLELDVWAKEREVAGLKASLNTLTSEVQRL YKLCAEWKEAEDSLKKKWKKIEEFDARRSELECIYNALLRANMEASTFWEQQPLSARG YASRTIIPACNAVVDMSTNSRDLIERELSAFGQSLDNSLCRLPATPQALLEALGSNGA TGSEAVAAAEKHAALLTARAGARDPSAVPSICRISTALQYNSVSPGTEGTDSGLASVL NSLEFCLKPCGSEASILEDLSKAINLVHTRRNLVENDRVLLNRAHRAQQEYERVANYC LKLAGEQEKMVSERWLPELRNAVQEAQRCFEDCRRVRGLVDEWYEQPAATVVDWVTID GQSVGAWINLVKQLHMEISRRTLAISTAGDD</aaseq>

Gene Sequence

<dnaseqindica>4037..4189#3509..3641#2674..2878#2226..2385#1908..2093#1305..1514#736..786#atgaaaatgagcaggtcattgatgctgcttcaactgatgcaagctcacccttgccatatcaagtatatggcaatggaaagactggatcagagctgtcaacccgcggaacatatgaccagctactggaaagacaggttctcccttaagatgcactttattgctcctattgttgtttatcacaacctttgcaggaaaacaatatccttgctatcgttactattggatttgtgcttctcttcttgtttttcacttcctttcaagaattgtaatatatgtactttgcattttatgttttaggattacaatacttcatcgataaacttcagaaaacattacttcatctatatgcactcagaattcgaaaatgtcaaactatgttttaggttgttatctagggttgtttatttatttatttttctagacatttcacacctgtacttgattgttttttctttcctcttgataaaaaaaaagaagctgcatgatttcatcaagctcttctttctccacaggctagtaaaattctgtgttaatgccttatgcctaccacctcaaatgaagtacatgtcactgaagttaacttccacataacatttatttaccttgcagaaagaacatgttcagcaattcttggccacagaagatgctttaaataaagctgctgaagctaaagctaaaagccagaagctcttgcaacgccttcatggcactagtgatgcggcaggaagtaaaaagatgcctactgggaacacctcacagaacatgactaacagcagacacttggaggtacttattcaagattccactgtggtgtaatgaatttaatttaagatgcttccttccaaattaatattaatacttacagtgagaaagcagcagtcataacatttattctctaaaaaaaaggaaaaaatggtaatatgcacacaagtttccaagatcttcaatttggtactccagtttcgtattatcaagaatatcagataagcataatctctataacattgtcatggcttatgaaacatgtttacgttttgagttcatgattaagctaaatatgactatgaaattctcatggtgcttataatgtgtttgtgcattctatgatactaacagtacccgaatctattagcttgtattgtttgtataaactgtagcaaaatttctgttgtggaagctgcatttgcttgctgcttgtaagctatgtaattgtgcattatcttttcaatttcaatatcacacacacgcacaaaggtctcatcttttcctgatagctctgttgtctgtttgctgcattattttagctcgatgtttgggcgaaggaaagagaagttgctgggttaaaggcaagcttgaatacactgacttctgaggtacagcgtctgtacaagttatgtgctgagtggaaagaagcggaagattccttgaagaaaaagtggaagaaaatagaagaatttgatgctcgtagatcagaacttgagtgcatttacaatgctcttctgcgggccaatatggttagtctggagcctttgtacttttccttactagctctttacttagttcgctattcaattttttaaagaaagttttagatatagacatgaatatagaaatagaagcagttacttatcaacattctttccagcatggttactggttgccattttagtaactttccatctaatacagcagcgtagtgagctcaagtcataattatgttcattatagtggcttggcagctttatgaaggtagcaccataggaaactaggagctattagaaatatcttaggtggggattcatggatttgggtcttacactcttcttactcttgatatatgtctcaataattgaatacaatgggcatgatcacttcttgaaagatgttgccaaacttgctatatataggaggcatcaacattttgggagcaacagccattatctgcaagaggatatgcgtcaagaacaatcatccctgcttgtaatgctgtggtagacatgtcaactaactcaagggatctcatcgagcgagaattgtctgcgtttggtcagagcttggataacagcttatgcaggttgccagcaactcctcaggttggtaacattacagtgttaactgtcttagcgagcaggctagcagaatgaaggctataagagccatcatgtgtttctgatctgctgactccttcaatctcttatgtcactgctgtggtttctttttcacaggctcttttggaggctttgggctccaatggtgctacaggatcagaagcagttgcagctgcagagaaacatgctgctttgttaactgcacgagctggagccagagatccatctgctgtgccatccatatgccgcatctctactgctcttcagtacaattctggcaagttcactgctgttgttattgttgttagttcaagaaaaaaagtgtgattatgatattatataacatgttaagccaaaatgtgttccacttggtggagatggtggtctctagctcttggcttgggtatgaagccttgagccaagtaggtattattatttgttgttgagtgcatccactaataacatctactaacatctattgtttttcatttgtggaactgctttcacatttctctatttgattgtatagagtatactcacatgttaacggtgtctttgttaacagtttcaccaggtacagaaggcactgattctggcttggcatcagttctaaattcactggagttctgcctaaaaccttgtggttctgaagctagtatactagaggatttatcaaaggctattaatttggtgcacacgcggagaaatctggttgagaatgatcgtgttttgctgaaccgagcacatcgtgctcaacaggaatatgaaaggtacgctgaaattttacttaatctttgtctttcttcacaatagatatttactgaatccagctagaactgtaacataaaggagatgtcttgtgtatcagtgattgtcggtatagtttgtaggactggtgccaatgtttgtttgtattcccttccatcctctgtcgacttgttcggttcctgcaattttgttcctcagaaaatagtatttcatttcgggtattttttatcagtacatattttctcttggaagtaggggttttgttattgaaaagaattctaacatgcgtttcaaatacattttgttcactgtgtaatgcatgtggcagctgtaacatttaccaattgagcagtgtaccattgggattcatgaactgaagacttgttcttaattttgaattgatgacaagtccacaaaatgttatttagtatgctgatacgcagtgaaataaaattattgtgcagctgatgtctatctaaaacaatccaggaattgcaatttgggatgcccttgtttatcacaagtagtcctgtgtttttttattggtcttgaatatcttatatttggtggaatgaatctatattccagcttactacgtttcaagaatggctactgatgtttcctttatatagggtggccaactactgtcttaaattagctggtgaacaagaaaagatggtatcagaaaggtggttgccagaactgagaaacgcagttcaagaggctcaaaggtgttttgaggattgccgacgtgttaggggtttggtaagtatatgctaccttgtatttacaactttatctcttcatttcaattcctgtaagaacacaatccgagggccagacttcaatgagataatagcaatgcagttgtgttgcgattgaatgagcaatgattatggcctagcaaggactcccagtccagtcctggagagggatgttccccttcaacacctgctttttgtgtgtaggagaggaatactctattccacgcatctttcttgagggaactcatttcagttcaattgtccatactttccgttgtgttagaacctcttactgcaacgaaccacccatatgtgcaaatgatcatgtgtcatgtcagctcaaatatgtatgaagtagtaccatagcatttacttcaatattgcccttacttgcaggttgacgaatggtatgaacaaccagcagcaacagtcgttgactgggtgacaatagacgggcaaagcgttggtgcctggatcaacctcgtaaagcaactccacatggaaatctccagaagaacgcttgccatatccacggcaggcgacgactaaggcagctggtcgttatctctgctgtttgattttttatttttagaggcttgattggttggggttttacgccagcatatctgcttgatagctttgtaccatagcctgtgatgtaattgtaaaatcttggtttgtttattagtttagtatatgttctttt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0386600, RefSeq:Os09g0386600