BGIOSGA013788

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Revision as of 10:07, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013788| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013788, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA013788

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013788, complete gene.

LocusTag

OSJNBA0059E14.6

Ensembl Transcript ID

BGIOSGA013788-TA

Ensembl Protein ID

BGIOSGA013788-PA

Length

2769

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:38144469..38147237

Sequence Coding Region

38144469..38144786,38144943..38145113,38145426..38145446,38145561..38145768,38146457..38146647
,38146766..38146885,38147004..38147237

Genome Context

<gbrowseImage1> name=IndicaChromosome03:38144469..38147237 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:38144469..38147237 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTCAGAAATGGCGGCTCGCCGAGCATCTATGGCGGTGGTGGTGGAGAGGGAGCTGCAGTGATCGGTAGAGGCGGCAGGTCGCTGCTGCAGGCGGCGGCGGCGGCGGCGGCGACGACGCAGAGCGCGGTTTTCAGCCTCGACAGCTACGGCGCGCACGGCGACGGCGAGCGCGACGACACGGCGGCGCTGGCGAGGGCGTGGAGCGCCGCCTGCGCCTCGGCGGCGCCGGCCGTCGTGCTCGTCCCGGAGAGCAGGAGCTACCTGCTCCGGCAAGTCACCCTCTCCGGCCCCTGCGAATCCACCATCAAGCTCATGGTGAAGGGGACGCTGGTGGCGTCGCCGGACATGTCGAACTGGAACGAGAGCAACAGGAGGTACTGGATCGTCGTCCGCGGCGTCGACGGGCTCGCCGTCGGCGGCGGCGGCACCATCGACGGCAACGGCGAGGGGTGGTGGGAGAACTCCTGCAAGATCAACAGGGCACTCCCATGCAAGGGAGCTCCAACGGCGCTGAGTTTCCACACGTGCGACAACCTGAGCGTGAATGGTCTGAAGATGGTGAACAGCCAGCAGATCCACATGTCAGTGGAGGATTGCACCGGGGTGGAGCTGGCCCACCTGTCAATCTCTGCGCCCGGCACGAGCCCCAACACAGATGGCATCCACATCACCCACAGCAAGAACGTCCAAGTCAGCGACTGCACCATTAAGACAGGGGATGACTGTGTGTCGATCGAGGATGGGACCCACGGTTTACACGTCACGAGACTGGTGTGTGGGCCCGGGCATGGGATTAGCATTGGGAGCTTAGGAGATGACAACTCCAGAGCTGAGGTGTCTGACATCTTCATCGACACCGTGCACCTCTATGGCACCACCAATGGAGCTCGGATCAAGACATGGCAGGGAGGGAGTGGATACGCCAAGGATATCGTATTCCAGAACATGGTCATGAACAGTGTCAAGAACCCAATAATCATTGACCAAAACTACTGCGACTCAGCTAAGAAATGCGAGACACAGGAGGGATCAGCAGTGGAGATTAGCAATGTGGTCTTCAAGAACATCGCAGGGACAACAATTTCCAAGAGTGCCATCACTCTGAACTGCAGCAAGAACTACCCATGCTATGACATTTCCTTACAGGACATCAACCTGGAAATGGTGGATGACAATGGTGCCACAGGAAGTACTTGCCAGAATGCAAAATGGAGGAAATCTGGAACAGTTGTTCCACAACCATGCACCAGCACAAATTAG</cdnaseq>

Protein Sequence

<aaseq>MVRNGGSPSIYGGGGGEGAAVIGRGGRSLLQAAAAAAATTQSAVFSLDSYGAHGDGERDDTAALARAWSAACASAAPAVVLVPESRSYLLRQVTLSGPCESTIKLMVKGTLVASPDMSNWNESNRRYWIVVRGVDGLAVGGGGTIDGNGEGWWENSCKINRALPCKGAPTALSFHTCDNLSVNGLKMVNSQQIHMSVEDCTGVELAHLSISAPGTSPNTDGIHITHSKNVQVSDCTIKTGDDCVSIEDGTHGLHVTRLVCGPGHGISIGSLGDDNSRAEVSDIFIDTVHLYGTTNGARIKTWQGGSGYAKDIVFQNMVMNSVKNPIIIDQNYCDSAKKCETQEGSAVEISNVVFKNIAGTTISKSAITLNCSKNYPCYDISLQDINLEMVDDNGATGSTCQNAKWRKSGTVVPQPCTSTN</aaseq>

Gene Sequence

<dnaseqindica>1..318#475..645#958..978#1093..1300#1989..2179#2298..2417#2536..2769#ATGGTCAGAAATGGCGGCTCGCCGAGCATCTATGGCGGTGGTGGTGGAGAGGGAGCTGCAGTGATCGGTAGAGGCGGCAGGTCGCTGCTGCAGGCGGCGGCGGCGGCGGCGGCGACGACGCAGAGCGCGGTTTTCAGCCTCGACAGCTACGGCGCGCACGGCGACGGCGAGCGCGACGACACGGCGGCGCTGGCGAGGGCGTGGAGCGCCGCCTGCGCCTCGGCGGCGCCGGCCGTCGTGCTCGTCCCGGAGAGCAGGAGCTACCTGCTCCGGCAAGTCACCCTCTCCGGCCCCTGCGAATCCACCATCAAGCTCATGGTAAAAAAAATTCAAACAGAATATTAGTTGATTAATCTTCCATATCCAGCTGCAATTCAGCTTGGAACTGAAGCTGATTAAGTGATTAACACGGCCATTAATATTAATCTTTCTGAAATTAGTGTAATTCTGACGTGATTTTTGGATAATATGCAGGTGAAGGGGACGCTGGTGGCGTCGCCGGACATGTCGAACTGGAACGAGAGCAACAGGAGGTACTGGATCGTCGTCCGCGGCGTCGACGGGCTCGCCGTCGGCGGCGGCGGCACCATCGACGGCAACGGCGAGGGGTGGTGGGAGAACTCCTGCAAGATCAACAGGGCACTCGTAAGTGTACTTACAGTACTGATCAAGAAATTAAATTCAAGTTCAAATCGCTATGAATTGGCTTTTCTAGCACGTAGATAGGTGGTTAATTAATAAATTATAACTAGTTCTAGTAGGCGCCGTTTTTCTTGATGTGATGGTTTACTTATGCATGGCGGCTGCTTCAAATTTTCGTTTGCACGTCGCATGGTCCTTGACTTTCTACTCGTGCATTTCGTATTCAAATATATATTCAATTCAATTTATAATTTAGTCAATTGTGATGGCCACGGATCTCTCTAACCTAGTTCATTTTTCCTCTGTACTTTTCAGCCATGCAAGGGAGCTCCAACGGTACGTGCATGCATGCGAAATGCAATATTTTTTTTCTCTTCTTTTTCCAAATTTCATTTACTCAATTTTTGTAGTACCTTTTAATTTGATTCATTTTGTTTGTAATTAATACAGGCGCTGAGTTTCCACACGTGCGACAACCTGAGCGTGAATGGTCTGAAGATGGTGAACAGCCAGCAGATCCACATGTCAGTGGAGGATTGCACCGGGGTGGAGCTGGCCCACCTGTCAATCTCTGCGCCCGGCACGAGCCCCAACACAGATGGCATCCACATCACCCACAGCAAGAACGTCCAAGTCAGCGACTGCACCATTAAGACAGGTAATGCAACTACTCCCTCTATTTTATATTATAAATCGTTTTATTTTTTTAGTCAAACTAGTTTATAAAAAAATTAGTACTCAATTGCCAAATATAGCATCTAAACCATCAAAATTAGTTTCATTAAATATAGCATTTAACATAATTTTGTAATATACTCCCTCCATCCACAAAAGTTATACCTATTATTTTTATCACTAAGACTAATAAGAAATTAATTTGTCTTGGATGTTACAAAATCAAGAAGTAATGCAAGCATGCAACCAATGAGTATTTAGAAGTCTCCTTGGATTCTAATCAAACATTTTATTTATTTATTTATTTAAGTCTTGAATGCATAAAGATTACAAATAGGTGCAACTTATTTGGAAAAGCTCAAATGTGGAATATGTGTAACTTTTATGGAGGGAGGGAGTATTTATTTTATGTTGAAAATATTACTATTTTTTAAAATAAATTTGATTAAATTTAAAAAAAATTAACTAGAAAAAATAAGTAAAAACTATTTATAATATTAAACTGAGCGAGTAATCAATTGCCAAATTAAGCACAGAAACATGATCAGGCCTTGTTTGGAAGGCCCAATAATTCCCTGCCCATAAGCTTGAATAAGCCCAAAAGGGTATGTTTTTTTTTAATCTTCAAAAGGATATGACTCTGATTAGGTTTTTGTTGTTGATCTCTGCAGGGGATGACTGTGTGTCGATCGAGGATGGGACCCACGGTTTACACGTCACGAGACTGGTGTGTGGGCCCGGGCATGGGATTAGCATTGGGAGCTTAGGAGATGACAACTCCAGAGCTGAGGTGTCTGACATCTTCATCGACACCGTGCACCTCTATGGCACCACCAATGGAGCTCGGATCAAGACATGGCAGGTAAATATCCTCCTCTCATCCTGCAGAGATTTGTGTGAACTTACTACGAAATTTTCATCAAACCTTTTGTATTTCAAGTGAATCTGAGAGAGATAGATGTGGATTTTGTCAAATGCAGGGAGGGAGTGGATACGCCAAGGATATCGTATTCCAGAACATGGTCATGAACAGTGTCAAGAACCCAATAATCATTGACCAAAACTACTGCGACTCAGCTAAGAAATGCGAGACACAGGAGGTAACAAAAACATCAACTCTCAAAAACCAATCCTTTATTTAACACCAGTGAGTAATGCTCAACAAAAATCATCCAAATCACACAATTATTGCAAATTTGCCATGAACATGGATCTCAGGGATCAGCAGTGGAGATTAGCAATGTGGTCTTCAAGAACATCGCAGGGACAACAATTTCCAAGAGTGCCATCACTCTGAACTGCAGCAAGAACTACCCATGCTATGACATTTCCTTACAGGACATCAACCTGGAAATGGTGGATGACAATGGTGCCACAGGAAGTACTTGCCAGAATGCAAAATGGAGGAAATCTGGAACAGTTGTTCCACAACCATGCACCAGCACAAATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013788