BGIOSGA013794

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Revision as of 10:08, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013794| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013794, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA013794

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013794, complete gene.

LocusTag

OSJNBA0028F23.13

Ensembl Transcript ID

BGIOSGA013794-TA

Ensembl Protein ID

BGIOSGA013794-PA

Length

4777

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:38229489..38234265

Sequence Coding Region

38229489..38229620,38230671..38230848,38230993..38231160,38231267..38231442,38231568..38231726
,38232153..38232290,38232354..38232415,38232569..38232704,38233234..38233328
,38233580..38233695,38233776..38233905,38233998..38234052,38234125..38234265

Genome Context

<gbrowseImage1> name=IndicaChromosome03:38229489..38234265 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:38229489..38234265 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCATCCCTCCCCTCGCCGTCAGCGGGGTCGCCGTCGCCACCCTCGCCGTCCTCGGCCTCGCCGTCTTCGCCTGCCGGCGGTGGCGGCGGGGCGCGTCCCCCGCGCCCCCACCTCCCGCTTCCTCCCAGGATGATGATATTAACATGCGTCTCATATCTGACAATTTGGATGACTATTCAGTCTCGAGCAATAGTAGTACTGTCGATGAATCAGGAATTCGGATTGATAGGATTATCACTTCACCTAAGACTCATGGCATTGTTGGAAAAGGGGCAACCTATCCCACTGAATCTCATGTTATTGAAGGAGAAACTCATGTAATTGATGTTACAAACAGTAAAACGGAAGAGCTCTATTTGGGAAATACGCTTAAGCGTCCAGCTGTGGCAAATGGGCCAACACCTGATGTGAAGCACATAAGAAGGGATTCTGGAGAGAGTAATCACAATGGCACCATTCCTGATATTATAGTTGGAAGCAACCTATCTTTGGAGGTCATAGCTGGCCCATCTCATGGAATAAACCACTATATGCAGTCAGGTAACAAGTCCATGCTACCCGTGACTCTTGGAAGGGTTCCTCCAAGTCATTTGGTGTTAAAGGACTCAGAGGTGTCAGGAAAGCATGCACAGATTGACTGGAATGCAAATAAACTCAAATGGGAAATTGTGGATATGGGTAGTCTAAATGGAACATTTTTGAATTCCCGGTCAGTTAATCATCCTGATGTTGGATCTAGGCGTTGGGGTGAGCCTGCTGAACTTGCAGATGGTGATATTATAACACTTGGGAGTTCATCAAAAGTATCTGTCCAAATTGAGCTACAAAACCAACAACCTGTAGGAGTTGGTATAGCATCTGATCCAATGACAGCCCGTCGAACTGGGAAGAAACTTCACATGGAGGATGTCAGCTGCTGCCAGTATCCTCTTATCGGTGTGGAAAAGTTTGGGCTATTTGGCATATTCGATGGCCATGGAGGGGATGGTGCTGCAATAGCTGCCAGCAGGATTCTTCCACAGAACATTGCAAACATTTTGTCTCAACAGGAAACAAAAGAAAGAGTTCTTTCATGCCATAGTGCTTCAGATGTTCTTAGACATGCCTTTGCATTGACTGAAGCTGCACTCCATCATCAGTATGAGGGCTGCACAGCAACTATCCTTCTGATTTGGTTCGACCAGAACGAAGATTGCTTCGCCCAATGTGCTAATCTTGGTGACTCAGCTTGTATTATGAGTGTCAACGGGGAAATAATTACAATGACCGAGGATCATCGAGTAGTCAGTACAACAGAACGAGCCCGGATGGCAAATTCAGGACAACCCCTGAAAGACGGTGAAAGCCGTATATGTGGACTAAATCTTGGCAGGATGCTTGGGGACAAGTTTTTAAAGGAACAAGATTCACGGTTCAGCTCTGAACCATATGTGAGCCAGGCAGTTCGCATGACAAAAGCATGCTTAGCCTCTGCCCTTATTGCTAGCGACGGGCTATGGGATGTTATTAGCGCGAACAGGGCAGCGCAGCTTGTCCTTGAGGGTAAGCAGAAGTACAGCGAGCAGAAAACTTCAGCAGATAAAGTAGCACATCATGTGTTAAGTGAAGCTAGGAAATTGCGAACCAAGGACAACACATCAGTAATATTTGTAGACCTGGACACTCTGAGAAGTGATCCCTGA</cdnaseq>

Protein Sequence

<aaseq>MAIPPLAVSGVAVATLAVLGLAVFACRRWRRGASPAPPPPASSQDDDINMRLISDNLDDYSVSSNSSTVDESGIRIDRIITSPKTHGIVGKGATYPTESHVIEGETHVIDVTNSKTEELYLGNTLKRPAVANGPTPDVKHIRRDSGESNHNGTIPDIIVGSNLSLEVIAGPSHGINHYMQSGNKSMLPVTLGRVPPSHLVLKDSEVSGKHAQIDWNANKLKWEIVDMGSLNGTFLNSRSVNHPDVGSRRWGEPAELADGDIITLGSSSKVSVQIELQNQQPVGVGIASDPMTARRTGKKLHMEDVSCCQYPLIGVEKFGLFGIFDGHGGDGAAIAASRILPQNIANILSQQETKERVLSCHSASDVLRHAFALTEAALHHQYEGCTATILLIWFDQNEDCFAQCANLGDSACIMSVNGEIITMTEDHRVVSTTERARMANSGQPLKDGESRICGLNLGRMLGDKFLKEQDSRFSSEPYVSQAVRMTKACLASALIASDGLWDVISANRAAQLVLEGKQKYSEQKTSADKVAHHVLSEARKLRTKDNTSVIFVDLDTLRSDP</aaseq>

Gene Sequence

<dnaseqindica>1..132#1183..1360#1505..1672#1779..1954#2080..2238#2665..2802#2866..2927#3081..3216#3746..3840#4092..4207#4288..4417#4510..4564#4637..4777#ATGGCCATCCCTCCCCTCGCCGTCAGCGGGGTCGCCGTCGCCACCCTCGCCGTCCTCGGCCTCGCCGTCTTCGCCTGCCGGCGGTGGCGGCGGGGCGCGTCCCCCGCGCCCCCACCTCCCGCTTCCTCCCAGGTCGGACCCCCCGGAATCCCTCGATTATTTTTTTTTCACCAATTTATTTGATCGCCGTATGAAATGGAAACATTGTCGAGTGGTGATCTGTACTTTCTTGTGGTGGTGGTGGATCTTGGTGATGTTCGTTACGAGGGTACTGTTTCACGAGCGATTTGATTTTTGAGGTCCTTGGATTCGTCCATGGCGTTCTCTCGTTAGAATATACTACACCAACACAGAACCATGAGCGAGGGGAATACTGTGGCCTGCTCCCAGCCCTAGATTGTAGCTGCTGCCTTGCAGTGAATGTTGCATTGGTGGAGATTCGGCGGTAGCTTTTGTTTTCTGCTCTGATATTTAATCCAGCATGCATATTTGATTGATGAATTTGGTGCGTTTGTTAATTTGGTCATCGACAAGGCAAATTGCAGCTTGATAGGAGGAGGGGGGGATTATTGTGGTATTGCCCAAGCTGCAATGTTCTTAGATGCAACTGGATTACTGGACATAAGATTGTTATCTTTGCTTCTTTAAGCTTCATTTCCGACTCTTGGTTTGTCAAAAGCATAAACAGTAAATACAGCCCGATGAAATGGATGTGATTTTCTTTACTTTAGTCAATGTTTTTCCATTTTTGTACTTCAATCATTTTTCATGATCTTTTACTTATATTATACTTTGCTGTTTTGTGTTAAATGATACATTGTGTCCCATAGTACTCTCAATCTTAAGGAAATTTGGTCGGCCTAATCTTTGGCCGGCCCGGCAAGATACATTGCGTCCCATATGGTTGGATATGGGTAGCAACCACTTTTCCTTTTCCTCTATTAAGCTTCCTGGTCCACTGGAACAACTGGCACTAAGCCAATGAAGCCCCCACTGTCTTACTTTTCTGCTAAGAGCACGGAATGCTATGTTTAATCTAAGCGCATTTAATTTGTTTTTAGAAGATATACAAGATTTTTCTGTCGTAATTCATTCACATACGAATGTTATCACAAACTGTAATTAATAAAACCATTTACAGCAAGTCTGTTTTATCTAATTTATATTACTTGTTGCTTGCAGGATGATGATATTAACATGCGTCTCATATCTGACAATTTGGATGACTATTCAGTCTCGAGCAATAGTAGTACTGTCGATGAATCAGGAATTCGGATTGATAGGATTATCACTTCACCTAAGACTCATGGCATTGTTGGAAAAGGGGCAACCTATCCCACTGAATCTCATGTTATTGAAGGTGCGTATACATTTACACCCAGACTTTCATCATTATGTTATACAGCATCAGTCTTGTTTTCATTTCCTCTTTTAGTAATATTCATCTTATTTACTAACAATCGTCATAAAATTACAAAAATAATCAATTCTTTGGTTTGTGTAGGAGAAACTCATGTAATTGATGTTACAAACAGTAAAACGGAAGAGCTCTATTTGGGAAATACGCTTAAGCGTCCAGCTGTGGCAAATGGGCCAACACCTGATGTGAAGCACATAAGAAGGGATTCTGGAGAGAGTAATCACAATGGCACCATTCCTGATATTATAGTTGGTAAAAAATCCCTGAAAATATTTAAATATTCGAGTGGTCCTTATGCTGCAAATATTGTTGTTAACATGCATATGCTCATGTTTATAATCATTTGCTAGAAGTGCAGGAAGCAACCTATCTTTGGAGGTCATAGCTGGCCCATCTCATGGAATAAACCACTATATGCAGTCAGGTAACAAGTCCATGCTACCCGTGACTCTTGGAAGGGTTCCTCCAAGTCATTTGGTGTTAAAGGACTCAGAGGTGTCAGGAAAGCATGCACAGATTGACTGGAATGCAAATGTAAGTTGTGAAGATCTAAGCTGTATCTAAAAAAAAAATTCATATGACCTATGTACATACCTGCAAATATCTTAAGCCTTCTTACATTCCCATCCAATAAAATTATTATTACTCTTTTATTGCAGAAACTCAAATGGGAAATTGTGGATATGGGTAGTCTAAATGGAACATTTTTGAATTCCCGGTCAGTTAATCATCCTGATGTTGGATCTAGGCGTTGGGGTGAGCCTGCTGAACTTGCAGATGGTGATATTATAACACTTGGGAGTTCATCAAAAGTATCTGTAAGTTATAACCGCTTTTGTTTTTCAGTGTGTCCTTTCAAGTGTACTGAAGATTTTTATAACTAATTTATAGTAGAATTGGTCTTTTATTGCTTATGGTCCAGCATTATTATTCATCTGATGGTTAATGCTTTTATGTTCACATATCATTCTGCTTGAAATGAAACCCCTGTGCATTTTTTTTTCATATAATCCAACTATACCTAATTCAAATTGGCAAACATGTTACCACACTCGGCTTTTCTGTTTTCTTGCTAGCTGTTGACATTTCAGTTCATATGCTGGCCTATTTGGTTCCACATGTCTGCCATGCCATAGAAACTGGAGCATATATAAAAAAGAAAAAAAAACTCTTCAACATATGTTTGAAATTTGGTTGTATCTATCTTTGAAGAAAGCAATTCCCTGATAGCGCTACCGTGCTAGGTCCAAATTGAGCTACAAAACCAACAACCTGTAGGAGTTGGTATAGCATCTGATCCAATGACAGCCCGTCGAACTGGGAAGAAACTTCACATGGAGGATGTCAGCTGCTGCCAGTATCCTCTTATCGGTGTGGAAAAGGTATGTGAATGATTAGTTTTTGTGCAAATACTTGAGTGGTTTCTGATATTGATTTTTACACAGTTTGGGCTATTTGGCATATTCGATGGCCATGGAGGGGATGGTGCTGCAATAGCTGCCAGCAGGTAAGCTATTTCTGCCTATTTGTTTGATCAAGTGCAAATCATGATGTTATCCTAGAATTTGGACATTCGTGTATTAATTACTATAACCGTTCTTGATTTTGAGTTTGATATGATTATATACGTGTTGAACTGATGACCCCCTTTGTTGCCTAGGATTCTTCCACAGAACATTGCAAACATTTTGTCTCAACAGGAAACAAAAGAAAGAGTTCTTTCATGCCATAGTGCTTCAGATGTTCTTAGACATGCCTTTGCATTGACTGAAGCTGCACTCCATCATCAGTATGAGGTTTTCCTTTTATCTGGATTTCTCGTGTACTATATTTTTTGAACTATGTTGCTTAATTTCTTGTCTGGTAGTTTAATAACTTGATTAAATAAATACCATATGTTTGTTACAAGGTTTATCTATACATTTGGTTGGTATAGAATTTGTTGGACGAATGTTGCTACATTGTATGTTTGTTAACTTTTTTGATCAAATGATGTGCTACTGCAATTTCTTGTCCTTTACTTGCCCCTGGATGTGTAAAATTCATCACTTGCTGGTTTTCTAGATTTAAAAGTTTAGCTCTGATTCTTAATTTGGTTTCTGAAATGTATACATGAAGCGAAGTCTCTTGCAATTTAAGGTTCCCATGATTGCCAGGAAATATTTACCGAAATTATGAGTTGAGTCTCCCATTAAAACTCCTAGACTCCAGATAGTCTTTCTAAGGCTATATGCTGTACATGAAGTCTAGTGGGTCCTTGGAATCCTCTGTTTCTTGAATTGCCACCTTTTCAGTAGGCTTACCATGTTTTTCTATCTTTTCCAGGGCTGCACAGCAACTATCCTTCTGATTTGGTTCGACCAGAACGAAGATTGCTTCGCCCAATGTGCTAATCTTGGTGACTCAGCTTGTATTATGAGGTAATTAGCATCTTTTCTGTTCTCGAAGACACTGTACTATTTGGTTTTCTGTAGCACTTGCTTCCTCGCAAAGAAAAAAAAACCCACTAGCAGTCACTTGCTAGTATAATGTGAAATACACCATAATTGAAATTTAAATATTGCCACCCTATTGTATATTAAACTGCTATACAATAGCAATAAAAAATGATTTATAAGGTCCTCTTTCATCAAGCTTTGTAATACAGCAATAATTTATAAATTGTTGCCAGTGTCAACGGGGAAATAATTACAATGACCGAGGATCATCGAGTAGTCAGTACAACAGAACGAGCCCGGATGGCAAATTCAGGACAACCCCTGAAAGACGGTGAAAGCCGTATATGTGGTATATGCTATATTGCTATCTTACATCAGCTGCAGACTTGAACAATAATGATGACACGATCTCGCTGTTTATTTCCACAGGACTAAATCTTGGCAGGATGCTTGGGGACAAGTTTTTAAAGGAACAAGATTCACGGTTCAGCTCTGAACCATATGTGAGCCAGGCAGTTCGCATGACAAAAGCATGCTTAGCCTCTGCCCTTATTGCTAGGTATCAAAACTCCCCATCTATGATGGTCATGCTTGCTAATGTAATGCATTACTCATACATTTCATAACGTGCGCTTGTTTGCTCCTTTGCAGCGACGGGCTATGGGATGTTATTAGCGCGAACAGGGCAGCGCAGCTTGTCCTTGAGGTAACTCATCGATCGGCTTCAACCTCATGGTTATTAAGTCGTGGTGTGCTGATCTTTTATCTCATTTTTCAGGGTAAGCAGAAGTACAGCGAGCAGAAAACTTCAGCAGATAAAGTAGCACATCATGTGTTAAGTGAAGCTAGGAAATTGCGAACCAAGGACAACACATCAGTAATATTTGTAGACCTGGACACTCTGAGAAGTGATCCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013794