BGIOSGA013799

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Revision as of 10:08, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013799| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013799, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA013799

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013799, complete gene.

LocusTag

OSJNBA0028F23.1

Ensembl Transcript ID

BGIOSGA013799-TA

Ensembl Protein ID

BGIOSGA013799-PA

Length

5002

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:38299211..38304212

Sequence Coding Region

38299211..38299249,38299432..38299530,38299757..38299900,38300280..38301032,38301129..38301948
,38302063..38302310,38302455..38302561,38303268..38303418,38303548..38303700
,38304075..38304212

Genome Context

<gbrowseImage1> name=IndicaChromosome03:38299211..38304212 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:38299211..38304212 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGCCTGCGGCTACCACTCCCCGCGCTTCTCCGAGGACATTGCCTTTCTCCCTCAATGGCTACAGCCGCATCGGCCGCTGGCGGTTGGCGAGCACGGGAAGGACAGCGCCGCCGTTTCGTCGCCGTCTTGTGTGAATTGCGCGTTTATCGGAGGCCCTGCACAAGAGCAACATAGTTGTCTGAACACCATGGTGAATGCTGCTAGTTGCAGTGGATTTAGCTTGCACTTGTCGGGGGATGAGGGCACGCCTACTGGAACTACTCCTAGCAATGGCAATGTAGTGCCTTTCTCTCTGCATCTTTCTTCAGAAAGTACTTCAAAACTATCCTCAACTCAAGCCAATGGTCTAAACTCTGTTACATGCAAAGATGTGTTAGGTGGCTTTTGTATTGATGACCAAGCACAAGAGATCAAGACAGTGCCGCAAAATCAATCGGAAGCCAAAGACCTTCGAGAAATTTGTAAAATGTCTAGCGAGGAAATCAATAAAACATGTGATTCAAAAGGACATAGAAGACAGCAACTGTCTGGACGAAAGGTTGATGTTCGGAAACTCCGTAGCGCGGATGTGAATGATGCAGTTGAACTATCAATCGCTGCCTCTGAAGCCATGGTTATTGCGGAAATGATACTTCTTGATTCTCAGTCTGATAAACTAGCTACAGCTTCCTTAGAAGCTGCTCTACATGTGAAAGAAGCTCGGAAACAGTGTTTTCTTGAGGAGCTAGAACATTCTTGTGGATCCTCTGAAAGTGATCTGGATGAGACTGATGGGCTTTCAGAATTAGATGAGACTGAAATGCTCGATGCATTTCAAGATGTTGGCCTATCTCTTGTTCAAACTGCTTGTGCATCTCAAGGTCAGAACATAAGTGGCCTGAAACAGGAAATCTCTCACGCTAGTTCTCACCCTTGTGATGCAGAAGCTCACGTATTAGAGAGCTCTCCTGAGAAGCAAAATATTAGATGGAACAGCCATGATGCTGATACTAATGACCATGTATCTGATTCTTTAGCAAGTCACAATAAGGAAGGTGGAGTAGTTGCTGTGCAGACAAATGTTGGTACAAGGAAGCATGTAAAGGGATTATTCAATAAAGAAACTAGCTTCATTTCTGAGTCAATGGATGGCATGGATGAGTTCCCTTCTCCATCTAGAATTGCTTCCATGGAAATGGCTGCATCTTCAAGAGCTTCTTTTCTCCACAAAATTAAAGGTTCTTGTGAGGAAAACCAAGGTGCTGAAGCTGCACAGTTGTGCTCTCAAGTTGTATGTTCAAACTTGTCACTTGTGGATCCTCTTTGTTCCATTGTTCCATGTAGTATATCTTTCAACGAAGGCCCCCCTAGTCAGGCCCCTGAATGCATACAGAGTAAAGGGGATAAAGAATTGATCAGCACCAAAGAATTTCCATCAAAGCAAGATCTGGAGGGAGAAGCTGGTCCATCTTGCACACCAGTATCTAATATTCTGCTCAGGCGAAGGAAATACAGTTCTCTCAGACCTTTTAGCACAATAGCACCCATACCATATGTATCAAAAAGTACTGAACCTCATAATGATGTTGATGAGGCAGTTTGTCAGCAGGGAAGTTTTGCAGCAGTAACTTTAAATAAAAAGATACGACGTGTGCAAGCCTCTAAAGTATGTGTAGAAAATAATTTTGAAGCTGGAAATTTGCACGAATTTTCTAAGGTTCTAAAGAATCCATCTTATGCTCAGGGGGTCAGTGAGCATCAAAACAGTATGAAGAGTCTTAAAAGAAAGAAAGCCCAATTTTCAGAAGCTAAAATTAGTACCAGGAAAACCAAGAATATTAGAAGGACGCAGACTAAATCTCGATTCAGCTGGTCAGATAGCAGACTCATTGACACAATCGAACCCAGGGAGTACATTGATAATAAAGAAGCCCTATTTCATGGACTGGATTTTTTGTTGACTGGATTTCAGAGTCACAAGGAAAAGGAAATTGAGCCATTGATCCGAAAATTTGGAGGCTATGTTCTTTCTAGAGTGCCATCCTGTCCACTTGATAAAAGAAGCAAGCTGGCAGAGCTTGCTAGGTGCAAGCCTCTCATTGTTCTTTCTCCTAAAAAGGTATCAACGGCTAAGTTCTTATATGGCTGTGCTATCAACTCCTGGATTTTGAATCCCAGTTGGCTTTTTGATTCTATTCAAGCTGGTGTCATGTTGCCACCTGGAAAGTATTTTATTCGACAAGTGCATGCAATGCAGGGTATTTCAATGTTTGACCAGTCACTGCACCTAAGAAAGAATACATTGTTATTTGATGGGGTAGGATTCTTAATCCTTGGAAAAATCAGCTTCTGTTCCAAATTTTCCAACGTTATCAAGCATGGAGGTGGCCAAGTTTTTGCATCTCTTCAGGGATTAGTTCAAAGCTTGAAGGATAGAAGCTCTTCACATGGAATCATTCTCGTAGCAAATGAGGCCAGCGCATCACGCCATCTAAGCTATTGTGGGCTTGAGCATGACATAAAAACAGCGCCGGCGAGCTGGGTCATTGGCAGTCTATATTCTGGTAAACTGATTCCTCTGAAGAAAGATCGATGTGCCTCATTCCGCAAAATCAAGATGCCATCATTCCAACAACCGCAAGCATTTGACATGAGCCAAGAAATTTGA</cdnaseq>

Protein Sequence

<aaseq>MSACGYHSPRFSEDIAFLPQWLQPHRPLAVGEHGKDSAAVSSPSCVNCAFIGGPAQEQHSCLNTMVNAASCSGFSLHLSGDEGTPTGTTPSNGNVVPFSLHLSSESTSKLSSTQANGLNSVTCKDVLGGFCIDDQAQEIKTVPQNQSEAKDLREICKMSSEEINKTCDSKGHRRQQLSGRKVDVRKLRSADVNDAVELSIAASEAMVIAEMILLDSQSDKLATASLEAALHVKEARKQCFLEELEHSCGSSESDLDETDGLSELDETEMLDAFQDVGLSLVQTACASQGQNISGLKQEISHASSHPCDAEAHVLESSPEKQNIRWNSHDADTNDHVSDSLASHNKEGGVVAVQTNVGTRKHVKGLFNKETSFISESMDGMDEFPSPSRIASMEMAASSRASFLHKIKGSCEENQGAEAAQLCSQVVCSNLSLVDPLCSIVPCSISFNEGPPSQAPECIQSKGDKELISTKEFPSKQDLEGEAGPSCTPVSNILLRRRKYSSLRPFSTIAPIPYVSKSTEPHNDVDEAVCQQGSFAAVTLNKKIRRVQASKVCVENNFEAGNLHEFSKVLKNPSYAQGVSEHQNSMKSLKRKKAQFSEAKISTRKTKNIRRTQTKSRFSWSDSRLIDTIEPREYIDNKEALFHGLDFLLTGFQSHKEKEIEPLIRKFGGYVLSRVPSCPLDKRSKLAELARCKPLIVLSPKKVSTAKFLYGCAINSWILNPSWLFDSIQAGVMLPPGKYFIRQVHAMQGISMFDQSLHLRKNTLLFDGVGFLILGKISFCSKFSNVIKHGGGQVFASLQGLVQSLKDRSSSHGIILVANEASASRHLSYCGLEHDIKTAPASWVIGSLYSGKLIPLKKDRCASFRKIKMPSFQQPQAFDMSQEI</aaseq>

Gene Sequence

<dnaseqindica>1..39#222..320#547..690#1070..1822#1919..2738#2853..3100#3245..3351#4058..4208#4338..4490#4865..5002#ATGTCGGCCTGCGGCTACCACTCCCCGCGCTTCTCCGAGGTAACCGCGCCCCTCCTCCCAGCTCTCCCCCATTCTCCCTCCCCCGGTCTCGCGCGCGCGCCGCTGCATTTGTGGTCGGAGCGGCTGAGTGCGTTGGTCTGTATAAGGAACGAACTGGGTGGGATGCTTCCTTCTCCTCCTCCTCTTCGAATAACCTAGTGGAGTCGCGTTGATTTGTTCAGGACATTGCCTTTCTCCCTCAATGGCTACAGCCGCATCGGCCGCTGGCGGTTGGCGAGCACGGGAAGGACAGCGCCGCCGTTTCGTCGCCGTCTTGTGTGGTGAGGTCCTTTTTCTCTTTGGTTAGTAGCAACAATCTGGTGGGGTTTTAGTTCATGCTTTGTTTCTATTTTAGTAATGCCATCTTGCCTGGGCACCACAAGCCAATAATAATTAGTAGGAAACGAGATGTGCTGAATCCGATCTGAATATCTGATGTATATACCCATGTTTCTTGGTGTGCAGCTGGCTATGATCCAATGACTGATGTTCTTTCTTGAGTTGCAGAATTGCGCGTTTATCGGAGGCCCTGCACAAGAGCAACATAGTTGTCTGAACACCATGGTGAATGCTGCTAGTTGCAGTGGATTTAGCTTGCACTTGTCGGGGGATGAGGGCACGCCTACTGGAACTACTCCTAGCAATGGCAATGTAAGTTTTAGGAATGATATTCCTTACTGGGACTGCCTAAATTCTGGATGCAAATCACCATGGACATGAAAGTGTTCTAGAAGAGCTTAATTGTAAGCAACAAGGTTGTCTACTAAGAAACTAGTAAAACTCATGTTTCCTTTGCAAGGACAGAAGTTACAAATTGTTTCCTGTCATTAACCTAATTTGTTCAAATGATGCATGTAGCCATATATACTGTATATACATCTTTGCATTCAATGTACTATGCTAATGTCCTGAATATTGTAACTTTGTCATGCTGTTAGACATCCTTTTGTGTAAGTGTATTCATTGTCAAATATTCTTATTCTTATATTAAGTCATAACACATTGAATATTTGCTCTCTACACTCTACAGGTAGTGCCTTTCTCTCTGCATCTTTCTTCAGAAAGTACTTCAAAACTATCCTCAACTCAAGCCAATGGTCTAAACTCTGTTACATGCAAAGATGTGTTAGGTGGCTTTTGTATTGATGACCAAGCACAAGAGATCAAGACAGTGCCGCAAAATCAATCGGAAGCCAAAGACCTTCGAGAAATTTGTAAAATGTCTAGCGAGGAAATCAATAAAACATGTGATTCAAAAGGACATAGAAGACAGCAACTGTCTGGACGAAAGGTTGATGTTCGGAAACTCCGTAGCGCGGATGTGAATGATGCAGTTGAACTATCAATCGCTGCCTCTGAAGCCATGGTTATTGCGGAAATGATACTTCTTGATTCTCAGTCTGATAAACTAGCTACAGCTTCCTTAGAAGCTGCTCTACATGTGAAAGAAGCTCGGAAACAGTGTTTTCTTGAGGAGCTAGAACATTCTTGTGGATCCTCTGAAAGTGATCTGGATGAGACTGATGGGCTTTCAGAATTAGATGAGACTGAAATGCTCGATGCATTTCAAGATGTTGGCCTATCTCTTGTTCAAACTGCTTGTGCATCTCAAGGTCAGAACATAAGTGGCCTGAAACAGGAAATCTCTCACGCTAGTTCTCACCCTTGTGATGCAGAAGCTCACGTATTAGAGAGCTCTCCTGAGAAGCAAAATATTAGATGGAACAGCCATGATGCTGATACTAATGACCATGTATCTGATTCTTTAGCAAGTCACAATAAGGTATCTTTGTTGCCAATCAAATGCTTTATCATCGAATGTTTTGTTTCTAATAAACTTCACTTATCTGCTACATTACAATGTAAATTTTCTTTCCAGGAAGGTGGAGTAGTTGCTGTGCAGACAAATGTTGGTACAAGGAAGCATGTAAAGGGATTATTCAATAAAGAAACTAGCTTCATTTCTGAGTCAATGGATGGCATGGATGAGTTCCCTTCTCCATCTAGAATTGCTTCCATGGAAATGGCTGCATCTTCAAGAGCTTCTTTTCTCCACAAAATTAAAGGTTCTTGTGAGGAAAACCAAGGTGCTGAAGCTGCACAGTTGTGCTCTCAAGTTGTATGTTCAAACTTGTCACTTGTGGATCCTCTTTGTTCCATTGTTCCATGTAGTATATCTTTCAACGAAGGCCCCCCTAGTCAGGCCCCTGAATGCATACAGAGTAAAGGGGATAAAGAATTGATCAGCACCAAAGAATTTCCATCAAAGCAAGATCTGGAGGGAGAAGCTGGTCCATCTTGCACACCAGTATCTAATATTCTGCTCAGGCGAAGGAAATACAGTTCTCTCAGACCTTTTAGCACAATAGCACCCATACCATATGTATCAAAAAGTACTGAACCTCATAATGATGTTGATGAGGCAGTTTGTCAGCAGGGAAGTTTTGCAGCAGTAACTTTAAATAAAAAGATACGACGTGTGCAAGCCTCTAAAGTATGTGTAGAAAATAATTTTGAAGCTGGAAATTTGCACGAATTTTCTAAGGTTCTAAAGAATCCATCTTATGCTCAGGGGGTCAGTGAGCATCAAAACAGTATGAAGAGTCTTAAAAGAAAGAAAGCCCAATTTTCAGAAGCTAAAATTAGTACCAGGAAAACCAAGAATATTAGAAGGACGCAGACTAAATCTCGATTCAGCTGTAAGTTTTCCCTTATCCATCATCATGCAATATCAAAGACGTACTCTGGCTCATTTTGAATAATTTTTAAATATCATTAGTCCTTTCGGCGATCCTTACAGTTTAGTATTTCAGGGTCAGATAGCAGACTCATTGACACAATCGAACCCAGGGAGTACATTGATAATAAAGAAGCCCTATTTCATGGACTGGATTTTTTGTTGACTGGATTTCAGAGTCACAAGGAAAAGGAAATTGAGCCATTGATCCGAAAATTTGGAGGCTATGTTCTTTCTAGAGTGCCATCCTGTCCACTTGATAAAAGAAGCAAGCTGGCAGAGCTTGCTAGGTGCAAGCCTCTCATTGTTCTTTCTCCTAAAAAGGTTTGCTAATCCATTTCATTTTTTCTTTGTGTTTGGTACAGTTTATTGGTTACAAATGATAATATGCTCACATGTATTCCAAAAATTACCATTTCATATTTTGACAATATTTTGCACTTACGTCTCAAGTATTTGTTGTGACAGGTATCAACGGCTAAGTTCTTATATGGCTGTGCTATCAACTCCTGGATTTTGAATCCCAGTTGGCTTTTTGATTCTATTCAAGCTGGTGTCATGTTGCCACCTGGAAAGTATGGTGATCTAGCATCCACTCATATTATCATATGCTTATATTCACACGTTTCATGATGCCTATCCTCTGAAAATGTAATTTGAATTGGCATTTATGTCTTTCTTGATAAAGTTCAATGTTGCATATATATTATGAAGTAATCAAGGAAAAGTTGTCGGTTATGGTATTTCTGTATGATGTGCCATTGTATCAGTGATTCTCTGAAGTATCTATGGATTCTAGAATTATTAAGAAACTGCACGATTCAGTCTATTATAATTTATAAATTTGTCACTAAGATATTGTAGAAGGTTGAAAATATTTTCTTGTTTATGTCCTCAATTGTTGTGCCAACCGTCAGAAGTATATCTAACTTTTTATTTGAGGAGATAGACTACCTAAAAGGTCATCTTTTGAAAGGGCTTTATAATGCTGACATGATTAAGCATATGCAAATTGTAAGAGACTAATTATACACACATGCATAGCCAAGACTATTATTTTAAATCAGCTACAGTATGTCCATACGATATTCTTTCATCAAAGTGCAAACGTTCGGCTATATTGTCAAACATAGTCAACACACTTTTTGTGAACATCTGTGCTATATTTCTTTGGAAAAACTAATAATTCGTCAAACAATCTTGTTGTATTGCTTATGTGAAATATGTTAATGCTTTTCATTCTTGATGCTCACTTCTTTTCTTGTCATATCATTTTTCTAGGTATTTTATTCGACAAGTGCATGCAATGCAGGGTATTTCAATGTTTGACCAGTCACTGCACCTAAGAAAGAATACATTGTTATTTGATGGGGTAGGATTCTTAATCCTTGGAAAAATCAGCTTCTGTTCCAAATTTTCCAACGTTATCAAGGTATGTCGCAACTTGCAACAACAGACACAATAATAAACTAGTCTGTGATTGAAGATTTACTTATGTGAATTATAACTGATATGTTGTTAGCCATTACCTGAATCATTATCTCCACGATGTGTTTCACAGCATGGAGGTGGCCAAGTTTTTGCATCTCTTCAGGGATTAGTTCAAAGCTTGAAGGATAGAAGCTCTTCACATGGAATCATTCTCGTAGCAAATGAGGCCAGCGCATCACGCCATCTAAGCTATTGTGGGCTTGAGCATGACATAAAAACAGCGGTTAGTTGAATTTTGAATGTAGCGCTTCCAATCCCGATATAAGATTCGAGCATTAAACAGATACGACTTGGTAGCTTAGACATCTTTAATCTTCTCCAAATATCTGCATGCTAACTGAATGGGAAAAATATACCAAAAGTAGCTCATCAGCCATCTTTAATCCACTGTGTACCGCCTGCCAGTCATTTGTGCTGTTTCTTCTTGGTCTTGTATCTAATACAATGATCATTATCTGGAAGGCTTGCTTTCGTACTGTCCAAAAAAGAAGCGTTTGATTCACATCATAGAAAGCAGGAACATTTCTTTTTTTGACATTAATTGTTATTTTCTTCATACATGTTTCAGTGCTTATTATTCTCGAATTTTCTTTGCAGCCGGCGAGCTGGGTCATTGGCAGTCTATATTCTGGTAAACTGATTCCTCTGAAGAAAGATCGATGTGCCTCATTCCGCAAAATCAAGATGCCATCATTCCAACAACCGCAAGCATTTGACATGAGCCAAGAAATTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013799