Os12g0506400

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Revision as of 10:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0506400| Description = Cornichon family protein| Version = NM_001073369.1 GI:115488699 GeneID:4352293| Length = 3636 bp| Definition = Oryz...")
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Gene Name

Os12g0506400

Description

Cornichon family protein

Version

NM_001073369.1 GI:115488699 GeneID:4352293

Length

3636 bp

Definition

Oryza sativa Japonica Group Os12g0506400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19569577..19573212

Sequence Coding Region

19569845..19569913,19570794..19570981,19571711..19571833,19572651..19572720

Expression

GEO Profiles:Os12g0506400

Genome Context

<gbrowseImage1> name=NC_008405:19569577..19573212 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:19569577..19573212 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccatcgagctcatcctgtggctcttctccttcgcctccatcatggtcctcatcggcctcaccgcctaccagcttatatgtttatctgatttggagtttgattatatcaacccatacgattcttcatctcgcatcaactcagtggtccttatagaatacgcactccaaggggccttgtgcgcttctttcctcttgacactgcattggttcccgtttctagttatggcaccagtagcatactaccatggcaaattgtatatggatcggaaacaccttgtagatgttaccgagatattccggcaactcaattgggagaaaaaatacaggatgatcaagcttgcattctactttagtttgtttattataacgatctacaggcttgtgatgacggctgtgacgttattcattgatgaggatgcaaatctggttgacactagaactatttag</cdnaseq>

Protein Sequence

<aaseq>MSIELILWLFSFASIMVLIGLTAYQLICLSDLEFDYINPYDSSS RINSVVLIEYALQGALCASFLLTLHWFPFLVMAPVAYYHGKLYMDRKHLVDVTEIFRQ LNWEKKYRMIKLAFYFSLFIITIYRLVMTAVTLFIDEDANLVDTRTI</aaseq>

Gene Sequence

<dnaseqindica>269..337#1218..1405#2135..2257#3075..3144#actttgcttgctctccgaaaaaaaaaagggggaaaaaaaaagctcttttcctctcctcgcgtccatccgcgatccaccacctcctcctcccgtctccggcgaccgccgccgcgccattacacccagacgcgccggtctcctctcggcaccggccggcctagtcgaccgcagaagcggaggtgtgaccggagcggaggtcgtcggtcaaatccactccgggggtttcttgaattcttgggagcagagaggcaaaagtgaggcagcagccatgtccatcgagctcatcctgtggctcttctccttcgcctccatcatggtcctcatcggcctcaccgcctaccaggcaagctcccctcacctcacctcctcccgtttcgcttctgaaccacgccgatttagttccaagatccgtcgggcgaaatagtggatctcctggtagttttgggtttgggatgttttaggttttttttgtcggaattttcgcacgaattggtgccgtgttgggtcaacgggtgcggttcttggtgttgctccttgcctcattagctggtcaaacaggacaggtttaggtagcgttaactgcgatttatacttgttttccctctctgattttccgtattcatgtaactaatgtgtttaacttgagggaaagttaataatctttgtataaatttgaactgtatatttcattaaattggtcctaagtttgtgcagtagcagatttatactagtttgttgaacttaagggagaaaaataataatctttgtataaattttgcacggtttattttattcaatttgccctaagtttgtgcagtagcagattttgtttgcttgctgccatgttaggtggaaaaacatatccttttccacagtgtgttttcagattacatagatggttcatagttgatgctcaccacatctcagtccaattcaaaatagccatattggttttgttggttgtgtttttgcaaccaatgttagttgccatgcactaacaaatccaacattattggaattccattacagaacatactttggtttaagaattgtacatttgtggtcgtttgaagaattgatcttggagatatatgtttcaactatgagcaagttgaatttgcaaataaaatttacattcttcctatcttcttgcaagataggctgtactctcttctttctcatttttatttcactgattttgttttctccttgttctgtaccagcttatatgtttatctgatttggagtttgattatatcaacccatacgattcttcatctcgcatcaactcagtggtccttatagaatacgcactccaaggggccttgtgcgcttctttcctcttgacactgcattggttcccgtttctagttatggcaccagtagcatactaccatggcaaattgtacgtatttcttgctgttgccctgaagttaatccatctaaacattcattcttttgttgtcagtgcctaccatgttgatatatttgtttgtatggatagattgatgtgctagatcagttggtcgcataataaaatcatctattaaatgataaatctctcagtggatatggatttcactaagcatcataagtgttgtccactacatatccattcaacttatggacataggagggacataacatattatgaaatgctctttgaaaggataaatatggtttgaagtgatctagaaaactgcaagaaacaactgtctatgattttgtctattcaagttaatgatgttataattgtgcttatactgtgactctctagtgtttggattttggatttttgttctcagttgctgattgaaataaagttgaaaattgagctagttctcattgaaaattgagtagaataattttggccaaatgttagaggtattgttttttaatgtggctaaaatcaagtataactgataaccttttcacctacatgtatgtccagaatagttattttcttgggctagtaaccattagtttgcatattttttgtagcaaagatgtttggatatagaattttaatgccataaagtttgtactaagatgttaatcatgtaatgtttttagtacatgtccttatttgtttgtaccattatgatgattatataaaaaatcttttttttatcaggtatatggatcggaaacaccttgtagatgttaccgagatattccggcaactcaattgggagaaaaaatacaggatgatcaagcttgcattctactttagtttgtttattataacgatctacaggtttgactttagttcttttttcattcatcatttttttatcattgcatatgcttatcctacaatggaatattcatttgttagtcctaaagatagttcttatctcctcagtcaaacatatcatatgaccttatgtgtgccttctaaattgggaattttgtggatgtgcaacttcattcaatagcatctcagaatttgtcattgaatttcacctcgagtgtgagttatgttatggggccacatgtaattgaaagggtgctacatcattgtatgccacataacttatggaaaatccttgtttcatcaatataacattgaaccttgcatatctatagatgaaaggtaatgcaattaataccgaacctttcatgcagtaggatataaattgttcgtatttaaaacttttaaatattttacatatgtttgttgatttggccctcattcaagatgctctaatactgaaccaccttctggtggcacaaaggaatgatctcgttatcggttttccttgttcatgtgactctggcatcttacgtagcatcaaaccaaataggtggttgttttatgcaattggtttcaaacacacaaaccatcataaggagccattgaaatatgcaaatttattcagtattataaaggcaagcaacgaccctatcatgacctgttctcttccttgttactgattgtgccgtggtggattttgtttttctgcggatatgataacttcaattagttctcatccaagaatgtagtcccttccagtatcatgctaagtcgctattgcataagctactatttgcatattcgttccatctgacaggcttgtgatgacggctgtgacgttattcattgatgaggatgcaaatctggttgacactagaactatttagagtttgctaccaacttttcacacacagatggctaggtatttcagtctcagaacttgtcatgtatcactttcttttttgcggagatacctgttcggtaactgactttggtcctgcttttcttttgcaaggaaaatgtgtaagatgcagtgaagtaaagcttgtggtgtgcatcattgaacagcaaaccaacactgccagcctctgagagaagaattcagtacatcgctctggctttcagagaaagaagattcaactccctagccggggtactgaatctagcatctcagcattatcattttaaccataaacaagaattggcaagtcagctgtacaatgtagttttatgcgttttgagtgtgctcgatgacatctgtctaaatttggtaggcgattgatgcaacttttggcaatcactgattcatacctgcatccaagtaatgctgttgtactcaattcaacactgaattgtctataaaactggctcatatatgg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0506400, RefSeq:Os12g0506400