BGIOSGA013816

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Revision as of 10:08, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013816| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013816, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA013816

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013816, complete gene.

LocusTag

OSJNBA0094J08.33

Ensembl Transcript ID

BGIOSGA013816-TA

Ensembl Protein ID

BGIOSGA013816-PA

Length

3637

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:38528168..38531804

Sequence Coding Region

38528168..38528250,38528361..38528449,38529819..38529970,38530197..38530313,38530409..38530525
,38531115..38531258,38531661..38531804

Genome Context

<gbrowseImage1> name=IndicaChromosome03:38528168..38531804 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:38528168..38531804 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGGGCTGTACAGCCCGGGGTTCTCGCCAGCGAGGAACCTCTCCCCCCAGATTAGGAGCAACCCGACGGATGTTGATAGTCAGTATCTGGCCGAGTTGCTCGCCGAGCATCAGAAGCTGGGGCCGTTCATGCAGGTGCTGCCCATATGCAGCAAGCTGCTGAGCCAAGAAATTATGCGGGTATCAAGCATTGTCCACAACCATGGATTTGGTGATTTTGACAGGCATCGGTTTAGAAGTCCTAGCCCTATGTCTTCGCCAAACCCAAGATCTAATCGCTCTGGAAATGGGTTTAGTCCTTGGAATGGGCTACACCAAGAGAGATTAGGTTTTCCTCAAGGAACCAGCATGGATTGGCAGGGAGCACCACCAAGCCCTAGTTCTCATGTTGTAAAAAAGATTCTGCGTTTGGATGTCCCAGTTGATTCTTATCCAAATTTCAATTTTGTGGGACGCATTCTAGGTCCTAGAGGTAACTCTCTAAAGCGGGTGGAAGCATCCACTGGCTGTCGTGTTTTCATTAGAGGGAAGGGTTCCATCAAAGATCCAGGGAAGGAGGACAAACTCCGTGGAAAGCCAGGCTACGAACATCTGAGTGACCCACTGCACATTTTGATAGAAGCTGAGTTCCCAGCCAGTATCATTGATGCAAGATTGAGACATGCACAGGAGGTTATAGAAGAACTGCTAAAACCAGTGGATGAATCACAGGATTTCTACAAAAGGCAACAGCTCAGGGAGCTGGCAATGCTAAACTCAACCCTGAGGGAGGACAGCCCCCATCCTGGGAGTGTCTCTCCATTCAGTAATGGCGGTATGAAACGCGCGAAAACGGGCCAGTAG</cdnaseq>

Protein Sequence

<aaseq>MSGLYSPGFSPARNLSPQIRSNPTDVDSQYLAELLAEHQKLGPFMQVLPICSKLLSQEIMRVSSIVHNHGFGDFDRHRFRSPSPMSSPNPRSNRSGNGFSPWNGLHQERLGFPQGTSMDWQGAPPSPSSHVVKKILRLDVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIKDPGKEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDESQDFYKRQQLRELAMLNSTLREDSPHPGSVSPFSNGGMKRAKTGQ</aaseq>

Gene Sequence

<dnaseqindica>1..83#194..282#1652..1803#2030..2146#2242..2358#2948..3091#3494..3637#ATGTCGGGGCTGTACAGCCCGGGGTTCTCGCCAGCGAGGAACCTCTCCCCCCAGATTAGGAGCAACCCGACGGATGTTGATAGGTAACTCGGATTCCATTTCCCGTGTTTCTTGGCTTTTGTTGTGCCTTTGTGTTCTTGGGCTGATGAAGCTGATGGTGTGTTGTGATTGGTTGGTTGGATTGTTCTTGCAGTCAGTATCTGGCCGAGTTGCTCGCCGAGCATCAGAAGCTGGGGCCGTTCATGCAGGTGCTGCCCATATGCAGCAAGCTGCTGAGCCAAGGTGAGATCTTTTCTTCTTTTTTTTTGATCTCCCCTCTTCATCGTTTCTCGCTGTGCGACGAGATATTTTGTTTGGTTTTGAGAGAGGTGTTTCCTTTGCAATCGATGAATTTGGGAAAAACTTACATGGCTCCGATGCCTGAATGGGCGCTCGCGTTTGGATAGATGGCATTGGTGGTTTCTTGGCTCTACTGCACTGTCATCTCTGACGCATGAGCTGCTTGGATGGCGTTCTTGTTTTAGATTTGTGTTGCGATTTTACCTCAATCGGACAGATTGGATGATCAGGCTTCTGCTAGATAATGTTGCCGCCTGATGATTGCGATGATCGATCTGTCCTTGATAATCTACGCTGGCGATGTTGTAGAACGATCTTCTTGGCTGAAATATCACCAATCATTACATCTTTGTCTTAGATATTCAGATATTCATCTTATCATTCTATTAGTAAGAATCATATGTTTAATTTAGAGTTGATTTTAACAGTAGGATGTAAAAACAGTGATGAAGCTCGTGGTTTGTACTAGTGGGCAGTGGTAAAGGGTTTCTATGGACGTCAAGTCGTCACCTTATTATGCTTATCTCAATCACCATCAACCAATCAATGTGCATTACCATTTGCCAGCATGACGATTTCAACATTTTTAGACAGGCCTTGACATAATCAGTTTTAACATTTTTAGACAACCCTTGACATAATCAGCCGTACTTGATATAAGTGATTTTGGTACTAATAATTTTAGTCATCCGCAAACCGAACCGTAGAACACTCTGCTTGATATACAGCACCTTCCTTGTGCTAATGCTGGAAAAATTATAACTTGCAACTGAAAACCAAACGCATTTTCTTGTTTAATCAGGCTATACCACTGTGTCAGGTCACTTGTAGACCATGACATATAGGATTGTTATATATCATCACATTATAGCTTGAGGAATTTTCTGTCTTCTTCATTCAGAACATCAATAATTGTTCTCTATAGTTTGTAAGTGGTGATATTGGATCAAATCTTGCTTCACAATGCGATGCTATTCGTTTAGATTACCCTGTAGAAACTATACTCTGGCCATCTGTATACTGTAGGCCTATTGGATAAGTACATACGAAAGGGGTTAATATTACAGGTTATTGCTTCTGTTATTGAATCATGTTGGGTCTAGTTCTATTCATATGTGCTTTTAGTTACCTGTCTTTCTCCTGTGAATGTTTATCCATTGTATAATGAACTATCATTTCTTCTCCTTTTCTTGAGAGAGGATGAACTAGCATTTCTTATCTTGGTTCTGACAAAAAAGATTTAGTAGCAATGTCCAAAATTCTGACTGTAATAAACAACTTGTATATTCATTCTGACCTTTATGCTACTCAGAAATTATGCGGGTATCAAGCATTGTCCACAACCATGGATTTGGTGATTTTGACAGGCATCGGTTTAGAAGTCCTAGCCCTATGTCTTCGCCAAACCCAAGATCTAATCGCTCTGGAAATGGGTTTAGTCCTTGGAATGGGCTACACCAAGAGGTAGGCATTCTGCAAAACTTATTTGCCATCCAATGCATCAATGTATTCTGAGCTTAGCAGTTTATAGTACACTAAAGCCAATAATATGGTAATATTATGGAAAATTCACTCCCACTTTTTTCTAAGACAGATTGGCTGCTACTCATCATGCAGTGCACATGTTCAAGATGATTTGTCAAAAATACTGATAAAGCATTATCCTTGCCCTTTTTGAACTATGTAAAAGAGATTAGGTTTTCCTCAAGGAACCAGCATGGATTGGCAGGGAGCACCACCAAGCCCTAGTTCTCATGTTGTAAAAAAGATTCTGCGTTTGGATGTCCCAGTTGATTCTTATCCAAATGTATGATACCTCCACTTCATGTGTTATATTAATGTTAACAAAGAATAATTCTTGAGATCTTTTAATTACTTATTTTCCTTTTCCTTTTTTCCCAGTTCAATTTTGTGGGACGCATTCTAGGTCCTAGAGGTAACTCTCTAAAGCGGGTGGAAGCATCCACTGGCTGTCGTGTTTTCATTAGAGGGAAGGGTTCCATCAAAGATCCAGGGAAGGTAATAGTTTCTGAAGTTTGATTTGCATGCACTTCTATTGCTTCTTGAATCATCAGGATATTATTATGCTAACAAGTAGTTACAACAAACTATGTTTTTTCTTAAGATAACAGTAGCATCTTACAGTACATTATTAAAATATTGCTTAGGTATGCAAAATTTGGGTTAAACTCCTGTTGGTAGCACTTTTAATTTCAGTAAGTATATTGGAACTGTCTTCCTCTGCAAGGGATTTCATCTCCCACCAAGCTTGCTATTTTATTACCTCTTCACAGTCCAAATACTGTAATCCCTGTAGCATACAACTATAGCTTACATGGTTGGGGTTTTTTCCCCAATCATTTCGACAGCATACTGTACTTGTAAGCTTCTATTGTAATGATCTTTTTTCCTAATCTTAATAAGATTGGTCGACCGAACTTTCGGCCGAGCCGGCGAAAAAAAAAATGTTTCATCCTGCTTAGCTCATACCAAAGTTTTAATTGCTCTGCTTTTGCCTCCTCATATGTGCTTCGTCCTCTTTCTTCATAGATTCTACTGACCTGCCTAGCGATCAAGCTCATATATTTCCTTCCATGTTTCTTTGAAGGAGGACAAACTCCGTGGAAAGCCAGGCTACGAACATCTGAGTGACCCACTGCACATTTTGATAGAAGCTGAGTTCCCAGCCAGTATCATTGATGCAAGATTGAGACATGCACAGGAGGTTATAGAAGAACTGCTAAAACCAGTGGTGAGTAATTTGCATACACCCTATTTGTGCAGGCCTAGAGTATTTTTGCTAGTCTCCTAGGGTAACTGAGTGCAAAAATGATTGATTCCCGGAGAACCCAAAGAAAATGTGATCCCCTTGGTATTGGTTTGAATTGTTAATAACTATTCTGAATGTTTTCCTCCCCTTCATACTGGTCCTGAAATGTCTTCACCCAAAAGATAGCTCATTTCTTTTATCATGATTATTTACTACCAGTCTCTAATTGCTTCTCTCTGTTTTATTTTGGAAACCCATTCCTTTTTCACATGTTCTGTTCTGAACCTTGTGTTACATAATTGCTTCTTTCTCCAGCAATCCTTTAATTTGTAATGAAGTTTTCGTATGCCTGACTAAACGAAATCGCATCGGCTTCTTCTGCAGGATGAATCACAGGATTTCTACAAAAGGCAACAGCTCAGGGAGCTGGCAATGCTAAACTCAACCCTGAGGGAGGACAGCCCCCATCCTGGGAGTGTCTCTCCATTCAGTAATGGCGGTATGAAACGCGCGAAAACGGGCCAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013816