BGIOSGA013824

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Revision as of 10:08, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013824| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013824, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA013824

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013824, complete gene.

LocusTag

OSJNBA0094J08.7

Ensembl Transcript ID

BGIOSGA013824-TA

Ensembl Protein ID

BGIOSGA013824-PA

Length

5120

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:38684023..38689142

Sequence Coding Region

38684023..38684162,38684330..38684414,38684731..38685030,38685796..38685954,38686454..38686594
,38686680..38686736,38687369..38687507,38687789..38687893,38687994..38688211
,38688813..38688854,38688969..38689142

Genome Context

<gbrowseImage1> name=IndicaChromosome03:38684023..38689142 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:38684023..38689142 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGCTCCCCGCACGCCTCTCCCCCTCGTCCTCCTCCTCGTCTCCGCCGCGCTCCTCGCGGCGGCTCCCCTCTCGCCGGCGGCCGAGACCGGTGCCGCCGCGTTCGACGTCCGCCGCCACCTCTCCACCGTCACCAGGTACGATGTGGCGAGGGGATCCAATAGTGTGTCCTCCGCGCCGTCTATGTCGGATGAGTGCCGCGTGATCCACCTCAATCTCGTGGCAAGACATGGGACTCGCGCACCTACCAAAAAGAGAATCAAAGAGCTGGATAGACTGGCGGTTCGGTTGAAGGCTCTTATCGATGAAGCAAAACAAGGGCCTGAAAGTGACTCCCTGAAAAAAATTCCTTCATGGATGAAAGGGTGGGAGTCACCCTGGAAAGGTAGGGTGAAAGGTGGTGAGCTGGTCAGTGAAGGGGAGGAAGAGCTATACAACCTTGCTATCAGAGTCAAGGAGAGGTTTCAAGGCCTATTTGATGAGGAATATCACCCTGATGTGTATTCAATAAGAGCAACTCAGGTTCCTCGGGCATCAGCTAGTGCAGTAGCATTTGGTTTGGGTCTACTTTCTGGGAAAGGGAAGCTTGGACCTGTGAAAAACCGTGCCTTTTCTGTTCTGAGTGAGAGTCGTGCAAGTGATATTTGTCTGCGATTCTTTGATAGCTGTGAAACATACAAGGACTACAGGAAAAGAAAGGAGCCTGATGTTGAAAAGCAAAAGGAACCAATTTTAGAACACGTCACATCGGCATTAGTTAACCGTTATCATCTCAATTTTACACCAAAAGATGTTTCTTCCCTCTGGTTCCTTTGCAAGCAGGAAGCATCTTTAATGAATATAACCAATCAAGCTTGTCAACTTTTTAATGAAGCTGAGGTTTATTTTCTAGAGTGGACAGATGATCTGGAGGGCTTTGTGCTAAAAGGTTATGGTGAGTCAATAAACTATCGGATGGGACTGCCATTGCTCAAGGACGTTGTCCAGTCAATGGAAGAAGCAATCGTTGCTAAAGAAGAAAACCACCCTGATGGTACATATGAGAAGGCAAGGCTCCGATTTGCACATGCTGAAACTGTTGTCCCTTTCTCATGTCTTCTTGGTCTTTTTCTTGAAGGATCAGATTTTGCGAAGATACAACGGGAGGAATCATTGGACATACCTCCTGTGCCACCACAGGGAAGAAATTGGAAGGGCAGTGTTGTTGCACCTTTTGCTGGTAACAATATGTTGGCTTTATACCAGTGCCCAGGAAAAACTGATGGTGGTAAGATTTCTCAGGATCAGAAGAGCTCATACTTCGTGCAGGTTATACACAATGAAGCTCCAGTTTCAATGCCGGGATGCGGGAACAAAGATTTCTGCCCATTTGAAGAGTTCAAGGAGAAGATAGTTGAACCCCACCTGAAGCATGACTACGACGCCCTATGCAAGATAAGGCCGGTGGCAAGAGAGGAGCCTTCCTCCCTCAGTTCCAGGATGTCCAATTTCTTCCTAGGTTTGTTCTCGCAGAAAGGATACCGTGTTAGTGCTCAGGATGTGAAGTCGGAGCTGTAG</cdnaseq>

Protein Sequence

<aaseq>MAAPRTPLPLVLLLVSAALLAAAPLSPAAETGAAAFDVRRHLSTVTRYDVARGSNSVSSAPSMSDECRVIHLNLVARHGTRAPTKKRIKELDRLAVRLKALIDEAKQGPESDSLKKIPSWMKGWESPWKGRVKGGELVSEGEEELYNLAIRVKERFQGLFDEEYHPDVYSIRATQVPRASASAVAFGLGLLSGKGKLGPVKNRAFSVLSESRASDICLRFFDSCETYKDYRKRKEPDVEKQKEPILEHVTSALVNRYHLNFTPKDVSSLWFLCKQEASLMNITNQACQLFNEAEVYFLEWTDDLEGFVLKGYGESINYRMGLPLLKDVVQSMEEAIVAKEENHPDGTYEKARLRFAHAETVVPFSCLLGLFLEGSDFAKIQREESLDIPPVPPQGRNWKGSVVAPFAGNNMLALYQCPGKTDGGKISQDQKSSYFVQVIHNEAPVSMPGCGNKDFCPFEEFKEKIVEPHLKHDYDALCKIRPVAREEPSSLSSRMSNFFLGLFSQKGYRVSAQDVKSEL</aaseq>

Gene Sequence

<dnaseqindica>1..140#308..392#709..1008#1774..1932#2432..2572#2658..2714#3347..3485#3767..3871#3972..4189#4791..4832#4947..5120#ATGGCTGCTCCCCGCACGCCTCTCCCCCTCGTCCTCCTCCTCGTCTCCGCCGCGCTCCTCGCGGCGGCTCCCCTCTCGCCGGCGGCCGAGACCGGTGCCGCCGCGTTCGACGTCCGCCGCCACCTCTCCACCGTCACCAGGTACGCAGCTGCTTCGATCGCTGATCTGAGCATTTGTCATGTGGTGGTGGTGGGATTTTTGTTAGTTTTGGATGATACGGTGTTTGCATCCTTTTACTGAGTCTGGGACCGTGGAGCTAGGGTTTGGCGGGGATGGAAAAGGGTTTAATCCCTTTGTGATTTTGCAGGTACGATGTGGCGAGGGGATCCAATAGTGTGTCCTCCGCGCCGTCTATGTCGGATGAGTGCCGCGTGATCCACCTCAATCTCGTGGTAATTACCATTCCTGCATTTTTCATTTTGCTTTCGCCACACAGTTTTAGTAAATTCACCCATGTTAGTTCAGTGTTGTGTGAAGGAGATAGAGATTGCAGTAATAGCCATCATGAACGGTTCTAAGGGCTTAACTTAGTTTGCCAGAATTTCTCTGAACGATTAGCAGTCCAAAAACTAATTTAAATAGAACAATGTGCACTGCTGTATATGTTTAGTCTTTTCACTGTTGGTTACATTTCCTCTCCAAAATGCTGAAATGTACTTCAGCCATGATAAAAAAATGGCAGTTGATTTGGTGATTTTTGTTCTCCAGGCAAGACATGGGACTCGCGCACCTACCAAAAAGAGAATCAAAGAGCTGGATAGACTGGCGGTTCGGTTGAAGGCTCTTATCGATGAAGCAAAACAAGGGCCTGAAAGTGACTCCCTGAAAAAAATTCCTTCATGGATGAAAGGGTGGGAGTCACCCTGGAAAGGTAGGGTGAAAGGTGGTGAGCTGGTCAGTGAAGGGGAGGAAGAGCTATACAACCTTGCTATCAGAGTCAAGGAGAGGTTTCAAGGCCTATTTGATGAGGAATATCACCCTGATGTGTATTCAATAAGAGCAACTCAGGTCAGCTCAATGAGGTTTATTGCATTTGCTTAATAAATTATTATTTTTCAAAATACTAAGGAATCATGGGTTCATGGCTTTACAATCTTATCATCTGACAAAATACCACGAAATATGGAGCCTTAGTATAAGCCCAGTTTACTGTGAGTCAGATGTGGCTGGAACATAGTAACTTTTAATCCCAGCTTTGCTATGCGATTAATCATAGTTAAACAATTTTGTTTACTTTTACATCTACTCGCGCTACACTTTCTTTTGACAACTCCTCTGCTCTCTGCCGCCATTATCTGCTTTAGAACTTGGAACAAGAAAGCTGAAAACCAGTAAAACTAAAAGCCTCTCCTGCAGCTATTTTGTCTTCTTTATTGTGTACACTGAACTATCCTATTTAAATTAATTTTAATCATGACTTGTGGGGCCTCTTCTTGTATAATGCCTTAAATTGATGCTATACCCCAGTTTTCAGAAGCTCCCAACTTCACATGCGATGGCTTTGGGCTATAATACACACATTTTTTGCACACTTGAGCCAAAATGCCTACATTAGAGGGCTATTTTGGCTTGCTGTTTTTTATTTATTTTAGAAAGTAAACATAATATGGTTGATCTTCATAAGAGTGAATCCTACTGCCTGAAATGCACATATAGTTTCAACATGTAGCACAATTCTCTGTTGACTTTGTTTAATGATCTTAAGCTGATAAATGCTGTTAAAACTACTTCAGTGCAGTACGGTTAACTATTGCTCTCTGTTTGAGAATGCAGGTTCCTCGGGCATCAGCTAGTGCAGTAGCATTTGGTTTGGGTCTACTTTCTGGGAAAGGGAAGCTTGGACCTGTGAAAAACCGTGCCTTTTCTGTTCTGAGTGAGAGTCGTGCAAGTGATATTTGTCTGCGATTCTTTGATAGCTGTGAAACATACAAGGTACTATTGATGAACTATGGTAACACTGAGATAAAATAATAAACATATTTGGAGAAGAATAATGTGATCTTGTATCTCGACATATTTGTTCCCTTCTCTTTGGATGCAGACATTTTATATTTATAAGACATGCAAATGTTGGATGGATATCTTAATTACCAATTTTGAACAGATTTGTTCAGCTAATCAAACATACTGCTACATGCACTTGTGTGATCACTCTGTACTCTATACTCTGTACTCTGTACTCTGTACATGCATTTGACGGGTTTTTCATGTACTGTTTTATGCATGGTGCATTCATACTTCTGCTTATGTCTGTTGGCTATTCTCTCTGGACTTCTTGTTTTGCCATGTGATTATCAATCTCTATTCAGTCAGTGATAGTAAAATGTTCTTTTTAGTTCGATATGCTGTATAAGATAACTTTCCTCTGTTCATACAACTGCTATTGAATTGTTACTTTGACAAAGGATTGTAACTACAATACTATTTTCAGGACTACAGGAAAAGAAAGGAGCCTGATGTTGAAAAGCAAAAGGAACCAATTTTAGAACACGTCACATCGGCATTAGTTAACCGTTATCATCTCAATTTTACACCAAAAGATGTTTCTTCCCTCTGGTTCCTTTGCAAGCAGGTAACAACTTGCCTGAGGACACTAGTGTTCGATTCAGTAATACCTATGGATATTCAATAAGTTGAATTAATGGTTCATTTTGCAGGAAGCATCTTTAATGAATATAACCAATCAAGCTTGTCAACTTTTTAATGAAGCTGAGGTAGGTTGCTTTTGGATTTCAGTTTTTCTCAATTATACCACTATTGATGACTATACTTAACTAGCTTGTGTCCAGTAATATGAAAATGTTATGAGCCTGACATGCTATGCCTCCTTAGGCTCTGTTCTTTTGGTTGAGTTGGGAACCCATCCCTCCGGTACGAAAAACGAAGCAGTCTATTAGCACATGATTAATTAATTATTTGCTAATTTTTTTTTCAAAAATGGATCAATATAATTTTTTTAAGCAACTTTCGTATATAAACTTTTTGCAAAAAACACACCGTTTAGCAGTTTGAAAAGCGTGCGCGCGGAAAATGAGATGGGGGAGTTGGGAACTCCAGGAAACGAACAGAGCCTTAGCAGTTATCAGTTCAGTGATAAGATTACTCAGACAGACCTATTTCTCAACTGCACTATGTACTTTCTGTTATCTGGTTGTTGTAGAACAGTAGTATTTACACTGGATAACATCTGGAAACTATATACACTGCACATGAATGCTTCTAGAGCATTAATCATCATAATACTTTTTAGCTCGTAGGTTCTTTTTGGATAATTGTGTGCAAGTTACCAAAACATTAGTGTGCCTCGACTGATTTTGATTAATGACTAACACATTTGTTTGGTCAGGTTTATTTTCTAGAGTGGACAGATGATCTGGAGGGCTTTGTGCTAAAAGGTTATGGTGAGTCAATAAACTATCGGATGGGACTGCCATTGCTCAAGGACGTTGTCCAGTCAATGGAAGAAGCAATCGTTGCTAAAGAAGGTAGTGGTTCCTCCCAAGTTTAAGTTTATCAAATAAGTTCGTTGATACTACCACCTCTGCCTTCCTACATTCTATGCCTTTGTCTTCAACTGATATTGAAATTCTTGTCGTATCAGATGATTATTTGCATGACGGTTTCCTTAGCGTGTGCTAAATGTTTAGTTAGAGCTTGCAAATTTGCAATGCCAAATTGTAAACAGTACTTGAGATATACAGCCTTATTACAGGTAACATTGAGGTGTAAAATCTAAAATCGACATTTTCAATTCTTGAAATTGTAGAAAACCACCCTGATGGTACATATGAGAAGGCAAGGCTCCGATTTGCACATGCTGAAACTGTTGTCCCTTTCTCATGTCTTCTTGGTCTTTTTCTTGAAGGATCAGGTATCTTTCGTTATTGAGAAAATTCCATTCACACATAATCATTCTCCATGAATAATGTAGCATGTAACTAATTGCCCATTTCCTTGTCTTTCATATGTAGATTTTGCGAAGATACAACGGGAGGAATCATTGGACATACCTCCTGTGCCACCACAGGGAAGAAATTGGAAGGGCAGTGTTGTTGCACCTTTTGCTGGTAACAATATGTTGGCTTTATACCAGTGCCCAGGAAAAACTGATGGTGGTAAGATTTCTCAGGATCAGAAGAGCTCATACTTCGTGCAGGTTATACACAATGAAGCTCCAGTTTCAATGCCGGTAAGATTATAGCTTCTAATTTGTGGTTTATTTTTATGTGTTCTTCCCAATTTCTGGGGACTGGTCACTCGGACAACATCCTGCATTATTACACCCCTTTTATGCCCAAAATCATTGGATTTGTTTGATGATATAAGATTACAAGTTCTGTAGTTCATGTTATGCCCAAAATGCTCTTGTGAGCCCTTTGCTTGAGCTTGAACCCTCATAATTTTGGGCTTTGATACTTTCTTAGTTCATGCCGTGGTAACAGAATAAATGGCTCAAGGAGAATTCACGTCTAATATCTTTTGGCATCGGACAGGCTTTATTAACTTTAAGGACTTTATCCAACAATTGTTCCTTTCCATTTTTAATGTAGTAATTTATATAACAACAAAAACAAACTGACATTATCGCATAGTAAGTGCCATTAACAAACACTTTCAAAAAGTTGTGTATAGGTTTTACATATAACTTGTTTTTGCCTGGCCGGCCAAAGAGTAGGTCGGCCAAATTTCATTAAGAAAGAGTATTTATAAGCATGCCGGCATAGTCATCTGAGTTTTTTTGTAAGCTAATTTATGAAGAACCTCCTAATCAGGCTTTTTTTTTCCTCCAGGGATGCGGGAACAAAGATTTCTGCCCATTTGAAGAGTTCAAGGTAAATAAAATTGCCTGGTGCTAATGTTCAGGCATCGTATTCAAGAAACAAACATGAATCCCCTGAGCAGTTACCTGCTGAGCATCTCTCGTTAACGCCAGTCTACATTTACAGGAGAAGATAGTTGAACCCCACCTGAAGCATGACTACGACGCCCTATGCAAGATAAGGCCGGTGGCAAGAGAGGAGCCTTCCTCCCTCAGTTCCAGGATGTCCAATTTCTTCCTAGGTTTGTTCTCGCAGAAAGGATACCGTGTTAGTGCTCAGGATGTGAAGTCGGAGCTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013824

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA013824&oldid=58647"