BGIOSGA013830

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Revision as of 10:08, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013830| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013830, complete gene.| tag = OJ1754_...")
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Gene Name

BGIOSGA013830

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013830, complete gene.

LocusTag

OJ1754_E06.18

Ensembl Transcript ID

BGIOSGA013830-TA

Ensembl Protein ID

BGIOSGA013830-PA

Length

5998

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:38760722..38766719

Sequence Coding Region

38760722..38760783,38761412..38761584,38761680..38761843,38762152..38762262,38762453..38762532
,38762634..38762784,38762881..38762974,38763566..38763654,38764817..38764890
,38765004..38765166,38765590..38765675,38766197..38766280,38766372..38766552
,38766636..38766719

Genome Context

<gbrowseImage1> name=IndicaChromosome03:38760722..38766719 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:38760722..38766719 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCGCCACCGCCGCCGCCTTCGCGGAGCCCAAGACCAAGTACGATCGCCAGCTCAGGATATGGGGTGATCAAGGACAGGCTGCACTGGAGAAGGCTAGCATATGCTTGCTTACCTGTGGCCCTACAGGAACTGAAGCGATGAAGAACCTTGTGCTTGGAGGAGTAGGGAGTGTTACTGTTGTTGATGGTTCCAAAGTTGAACAATCTGACATGGGAAACAATTTCCTGTTGGATGCAGAATGCTTGGGGCAATCAAGAGCAAAATCTGTATGTTCGTTCCTGCAAGAGCTGAATGATGCTGTAAATGCCAAGTTTGTCGAGGAGTCTCCTCTGGCTCTCATAGACACAAACCCTTCATTCTTTTCCCAATTTACCGTAGTCATTGCTACTCAGCTTCCAGAGAGATCTTTACTGAAACTAGATGATATCTGCAGGAAAGCAAATATTGTGTTGGTTGCTGCACGTTCATATGGTCTAACTGGTCTAGTCAGGATCAGCGTTAAGGAGCACAATGTTATAGAATCAAAACCGGACCACTTCCTGGATGATTTACGCCTTCACAATCCATGGGTTGAACTCAAGCAATTTGCAAAGTCAATTGATATAAATGATAAAGATCCTGTTGTGCACAAGCACACTCCCTACATTGTTATCCTTGTGAGGCTTGCAGAAAAATGGGCAGATGCACATGATGGGCGCTTACCTTCGACTAGGCAAGAGAAAAATGAATTCAAGGCACTGATTCGAGAACATATGCTTAATTTAGATGAAGAAAACTACAAAGAAGCAGTGGAGTCCTCGTATAAAGTCTCTGTTACTCCAGGGATCAGTGATGAGATCCGTCAGATAATTGATGATAGCTCCGCTGAAGTGAATTCATCTTCTTCAGATTTCTGGGTTTTAGTGGCTGCTTTGAAGGAATTTATTGCAAATGAGGGCAACGGTGAGCTACCTCTTGAGGGGACGATACCTGATATGACTTCACTTACTGAGTACTATGTTAGCCTGCAAAAGATTTACCAAGCTAAGGCTGAATCTGACTGCCTTGCCTTGGAGCATCATGTAAAGGATATCTTGAAGCGAATTGATAGAGACCCTGATTCTATTTCACGGGCATACATAAAAACATTTTGCAAAAATGCTAGAAAACTCAGAGTCTGTAGGTACCGCAGTATGGAGGAAGAGTTTAGCTCTCCTGTTCTTTCTGAAGTTCAAAAATACTTCACCGATGAAGACTACTGCTTTGCAATGAACTTCTATGTTCTGCTACGCGCTGTTGATCGACTTGCAGCCAACTATAACAGATGCCCTGGAATCTTTGAAAGTGAGATTGATGAGGATGTGCCTAGGCTGAAGACAGCTGCTGTTTCAGTAATGAGTGAGATGGGTATGAACGGGGCACCTTTGTCTGAAGACCTGATTACTGAAATGTGCCGGTTTGGGGGTGCAGAGATTCATCCCGTGGCTGCCTTCATTGGCGGAGTAGCATCCCAAGAAGTAATTAAGCTGGTCACCAAACAGTTTGTGCCTTTGCTGGGAACATTTATATTCAACGGGATTGATCACAAATCTCAAGTTTTGGCGTTATAA</cdnaseq>

Protein Sequence

<aaseq>MAAATAAAFAEPKTKYDRQLRIWGDQGQAALEKASICLLTCGPTGTEAMKNLVLGGVGSVTVVDGSKVEQSDMGNNFLLDAECLGQSRAKSVCSFLQELNDAVNAKFVEESPLALIDTNPSFFSQFTVVIATQLPERSLLKLDDICRKANIVLVAARSYGLTGLVRISVKEHNVIESKPDHFLDDLRLHNPWVELKQFAKSIDINDKDPVVHKHTPYIVILVRLAEKWADAHDGRLPSTRQEKNEFKALIREHMLNLDEENYKEAVESSYKVSVTPGISDEIRQIIDDSSAEVNSSSSDFWVLVAALKEFIANEGNGELPLEGTIPDMTSLTEYYVSLQKIYQAKAESDCLALEHHVKDILKRIDRDPDSISRAYIKTFCKNARKLRVCRYRSMEEEFSSPVLSEVQKYFTDEDYCFAMNFYVLLRAVDRLAANYNRCPGIFESEIDEDVPRLKTAAVSVMSEMGMNGAPLSEDLITEMCRFGGAEIHPVAAFIGGVASQEVIKLVTKQFVPLLGTFIFNGIDHKSQVLAL</aaseq>

Gene Sequence

<dnaseqindica>1..62#691..863#959..1122#1431..1541#1732..1811#1913..2063#2160..2253#2845..2933#4096..4169#4283..4445#4869..4954#5476..5559#5651..5831#5915..5998#ATGGCCGCCGCCACCGCCGCCGCCTTCGCGGAGCCCAAGACCAAGTACGATCGCCAGCTCAGGTAACGCAACCGGCGCGCATCTGCGCTCTCTCATCTCCGACGGGTAGATTCCGGGCGCTTGCCGTTCGATCCTAGGGTTTAGGGCTCTTCGCGGTGGTGGAATTCCGGCACCGCTGTTCGGGTGCGGTTCGAGTGGGCGCGGTCTCTGATCTAGGGTTTTGGAGCTCCTTCTGTTCGGGTGACGGGTGGTCAAGAGCTGGAGGGATTTTCTCTGACAGAAATTGTTTCGAACGCTGCCGGTCATGCATTGGAGCTTGGTTGGTTGAAATATTGTTTACGTTGTTCACATGTAGTTGGGGATACCGACTGATAGCACTTTGCTGATTACTAAGACCCTAGTGGATTATGTTAGGGGTCCATAATTGGTGTTGGTGGTCTAGTCTGTGGCTTAATTGGGTGTTTTCTTATGTGCATCTGATTATCTGAGCTGTAGTTGTGCTTCACATGGGTAGTTCAGTTGCATATATAAATAGCACAGTTCAGTTTTACTTTATAAAATTTGACCTTCATTTTTCCAGCCTGCGACTTGTGTATTCTTCTTATTCTCTGCTTATTTTGCATCCGAGTAGGAAGAAGCAACCCACATACTAAAAACTACCTGTTATGATTCTGTTAATGCAAAGTACAGGATATGGGGTGATCAAGGACAGGCTGCACTGGAGAAGGCTAGCATATGCTTGCTTACCTGTGGCCCTACAGGAACTGAAGCGATGAAGAACCTTGTGCTTGGAGGAGTAGGGAGTGTTACTGTTGTTGATGGTTCCAAAGTTGAACAATCTGACATGGGAAACAATTTCCTGTGTAATTTCTGTGCTCCGCATCTATTCCTGTTCCATTTCGATAAATTTCCAGTAAAGCAATGGAACTCATGTTCCGAGTACTCTGTTTATGTTCAGTGGATGCAGAATGCTTGGGGCAATCAAGAGCAAAATCTGTATGTTCGTTCCTGCAAGAGCTGAATGATGCTGTAAATGCCAAGTTTGTCGAGGAGTCTCCTCTGGCTCTCATAGACACAAACCCTTCATTCTTTTCCCAATTTACCGTAGTCATTGCTACTCAGGTGTGTGTTTACTCTTATGGTAAGATGCAAAATCAGTGATTGATTTTCTTGACTTCTCTGCGTAGCCAGAACATTTAACAAGAAGATTTAAAAGTCAAGGAAATGAGAATTGGCAAGTTTTTATAATCGCACAGGCGCATTAGATATTCATAGATATACTCCCTCTAGTAAGAGATGCTTTTTTAGTGTGGACAGTCAAACTTTTATTATTTTAGCTATTTACTACACATGGATTGTTAGGAACAATGTGCACGTAGTTTTTCCTCTCGCGGCCAAATTTTGCTGATACCCAGTTTTTTCTACTGCAGCTTCCAGAGAGATCTTTACTGAAACTAGATGATATCTGCAGGAAAGCAAATATTGTGTTGGTTGCTGCACGTTCATATGGTCTAACTGGTCTAGTCAGGATCAGCGTTAAGGTACCTTTATTGATCTGTGCAAGAGTTTCTGAGTTGTTCTTTATTTGACTTTTAGCGGTGGACTGCATCTTGTTTCCTGACCTCATTATTTAGGACTTATTAATGTTGCTTGGCGGTTTTCATTTCCACAGTAGTCATGAGCCAAAGCATTTTCACCAGACTGAAAACTGTTTCCCTAACTATTGAGCAGGAGCACAATGTTATAGAATCAAAACCGGACCACTTCCTGGATGATTTACGCCTTCACAATCCATGGGTTGAACTCAAGCAGTAAGAGTTATTTGTACCTACATTGTTGGCATAGCAAGTTGCATGATCCTTTTCTCATTCTAGATGAAATCACTGTTGATCTTAATGCTTATGTTTTTCAGATTTGCAAAGTCAATTGATATAAATGATAAAGATCCTGTTGTGCACAAGCACACTCCCTACATTGTTATCCTTGTGAGGCTTGCAGAAAAATGGGCAGATGCACATGATGGGCGCTTACCTTCGACTAGGCAAGAGAAAAATGAATTCAAGGTACGTGTTTTGGGTTGTTGCCCCAATCAGTAAAAAGTGGTTGCTAATGTGTTTTGGGGACTGTCAGGTTATTGACTAATCTAATATCTTCTTCAGGCACTGATTCGAGAACATATGCTTAATTTAGATGAAGAAAACTACAAAGAAGCAGTGGAGTCCTCGTATAAAGTCTCTGTTACTCCAGGGATCAGTAAGTTTATTTTTAAATGTTCTTCTATCAGCATAATTTTACTTGCAGACATAATTTTGTGTGCTTGACTATTTCCTTTCTTAAATACCACTAGTAAAAACTACTTGAATTAACTTGAAGTTGTCACTCTAGTTTACATAATGAATGAATGTGGCCTATGTGTTAACAAACACCTCCTGGGTCTTGTACTTACATGTAGGCTGTGTTCGGACATCAGGGTTGGGAACACTTATCCTGCGCACGGAAAACGGAACGGTCCATTAACACATGATTAATTAAGTATTACGTAATTTTTTTTTCAAAAATGGATTAATATGATTTTTTAAGCAACTTTCGTATAGAAGCTTTTTTAAAAAAAACGCATGGTTTAGCAGTTTGAAAAGCGTGCGCGCGGAACACGAGGAAGAGGTGTTGGGAACTAAGGATACCGAACACAGCCGTAGTCTCTTTTTGAACCCATAAATATTTTAACTTATTTATAAATATCTGTTGTATTCTTGTTGTATGTTCCTGCAGCCATGCACGTGTACACAACATAACATAGCTTCTGTGCAGAACTGCAAGTTCTAATTAGTGGTTAATTTATTCTAGGTGATGAGATCCGTCAGATAATTGATGATAGCTCCGCTGAAGTGAATTCATCTTCTTCAGATTTCTGGGTTTTAGTGGCTGCTTTGAAGGTAGTTATAATTGTGATTTACAATTATGGAATGCCAACTTCTATTGTCTGATATACCATACCACTGAGCTGTTATCTGAGGTTCCAGGCACTCTTGATAAAGTTTGTTGTTGAAACCAAATTGGAAAGTATCATACGTTGTTGAGGTGTCAGCAATATTCAATGATACTTTTCTTTTTTAAAAAAGTGTATCATACGTTGTTGAGGTCTCTCGGCGCTATTCAATGATTCTTTGTTTTAAAAAAGTGAATCATATGTTAGTTGAGGTGTCTCTGCGATATTCAATGAACCTGCATGATCTAGACACCCAGTTCTAGTTTTATTTTTTGGGTTAAAAAAACAAGTCAGATCCAAAAGGTTAATCTTCTCTCTAGCCAGATGCCTCATATAACCTGAAGCAAATGTCAGGTAGCTTTGGAATTTTGATACTTATGCTAAAGCTGCATATGAGTTCTCTCCCTGGAGAATGCTCATTTAGAACAAAAAAGCTCTAGAAGCTTTGTGTGTCTGAAGCTGCTTTCATAATGAATGTATATTAAAAAGCCTGAAATAATGTGTTGTTTATGAACTATCTTCACACTTACCATCTGTAAAGTTGCACCATATATCCCTTTAGGAATGTTTCCATTTTACGTCCCTCAGCTTAGCAAGAAGTCTACTAAATGCACCTCAACTTCTCAGGAAATATATCGAACACTGACAAGTACAAAATTGATTATCGAGCACCAAAAATTTAGTAAACCTGGTAAATTTTCAACCCAAAGTGTTTTTGGAGGAGCCACAGTTGCTGGCATGAATCCAACTCAAGGTGTTCTTTCTGATTAAAAAAAACTCTGTTCTTTTGCTATATCGACAGTAACATCATGGGTATAATTCAAAATGTTAGCTTGCTTAGTTGTCTAAACCATCCAAACAAGAAAAAGAAATACAGCATTGACATTTCCAATGGTAGTGAGTCTGACTCTTGAGTGCCACCGGAAGAAAGCGTATATAGCTTCTGAATATATGATATTATTTTGGAGGGTATTAAATTTCTTTGAGAGTTCAGGGGTGTAACATGGACTTACTCATACTTTATGCTTTCTTTTTTTGGTTGAAATTATTGTTTTTTATTAGCATTCATGTCTCAATTTGGATTTCTTTCTCTCACTTGCTACTTACAGGAATTTATTGCAAATGAGGGCAACGGTGAGCTACCTCTTGAGGGGACGATACCTGATATGACTTCACTTACTGAGTTAGTGCCCTGCAGTCATCTAGCTTTGCAATGATCTCAGATTCAGTCAACTTCTGCCGAACTATTTTCTTCTATCACATGAATGCAGCTGTTTCTCTTTTATAACCTTACAGGTACTATGTTAGCCTGCAAAAGATTTACCAAGCTAAGGCTGAATCTGACTGCCTTGCCTTGGAGCATCATGTAAAGGATATCTTGAAGCGAATTGATAGAGACCCTGATTCTATTTCACGGGCATACATAAAAACATTTTGCAAAAATGCTAGAAAACTCAGAGTAAGCTGCTTTCTTTAAATATACATTGTAACACCTGTTTGGGATGGCTACAATGATGTGCTTGATAATCATTTGATCTAACTAGTTTTAATTGAGAAGAACCTTGTAGTATTTTGTACCCTATCCATATTCCATATATTTGATAAAGACAAAGCTGATTGTATGTGTATGGTATACTAGCTACTAGCTAGTACTGATCATTGCTTTTGCACTTGTTTCAAAAGAATTAAATTGTACAAGAGGTGCAATTGTCCCTTTTAAACTATGCCACTCCTGATTTATTTTCCTCCACTGGAATGCATGTGTTCAATTTTCTATTTGATATAACATGCTAATTCTTATCTCTCACTTTAAATATCATGATTGATAAATATTGTAGAACTATACCTGATAGTTATTGAGTAAGTGATATCTGCTGTCTAGGTCTGTAGGTACCGCAGTATGGAGGAAGAGTTTAGCTCTCCTGTTCTTTCTGAAGTTCAAAAATACTTCACCGATGAAGACTACTGGTCAGTACCTTTTACTCCTTTGTGCTTGTCATTTTTTTAATGTTATGGAACTTTCTCTGTTCATATACTTTGGCATCTTTACTTTAGTTTTCAAGCTCCATGCAGCTGTTACAAAGGTAGTACTGCTGTTGCTGCATCCTAGAATATCAGCCTATCCTAAATCATAGAAATTGAAAATACCTGTTAAACTGAATTGTAATGCAATACCAGGATTACAAGATGCCTTGATTGAACCTATTGAAGACTTTTTCTGCTTCGAATTGTGGTTTCATCGTCTTGTTGCAAACACAAGTTTTCTTTCAAACCAATAGTTGGTCACACTGTAGCATGCAGTGCAACTTTGGAGTAGGTGGAGAAGTCAGCTATTGTTTCTTCCTTTGCTTTGTATGTTGCCGGAACTGTTGTTAGAATGACTAGCCATTGTTATCTATTCTCCTATTTTCTATCTCCATGAATTCTCAACCGGTTATTGTTCTTATTGATTTATTTGTTATTCAAATGACAAGCAAATTTGGCTGCAGCTTTGCAATGAACTTCTATGTTCTGCTACGCGCTGTTGATCGACTTGCAGCCAACTATAACAGATGCCCTGGAATCTTTGAAAGGTAAGCATGAGTAAAATGTTCATTCACTTTCGGTGAACATTATAACATCGTACATGTATTTATAATACTAATAATACACTGGATTCGGTAGTGAGATTGATGAGGATGTGCCTAGGCTGAAGACAGCTGCTGTTTCAGTAATGAGTGAGATGGGTATGAACGGGGCACCTTTGTCTGAAGACCTGATTACTGAAATGTGCCGGTTTGGGGGTGCAGAGATTCATCCCGTGGCTGCCTTCATTGGCGGAGTAGCATCCCAAGAAGTAATTAAGGTGTGTTTTGATCTCGTGACGGTAATTTGTGGACAACCATTAATTGTTCTTTCATCGCACTAACTACTCATTCCCTTTTCCAGCTGGTCACCAAACAGTTTGTGCCTTTGCTGGGAACATTTATATTCAACGGGATTGATCACAAATCTCAAGTTTTGGCGTTATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013830

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA013830&oldid=58653"