Os12g0506700

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Revision as of 10:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0506700| Description = Conserved hypothetical protein| Version = NM_001073372.2 GI:297613219 GeneID:4352296| Length = 3437 bp| Definition ...")
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Gene Name

Os12g0506700

Description

Conserved hypothetical protein

Version

NM_001073372.2 GI:297613219 GeneID:4352296

Length

3437 bp

Definition

Oryza sativa Japonica Group Os12g0506700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19579286..19582722

Sequence Coding Region

19579286..19580503,19582363..19582578

Expression

GEO Profiles:Os12g0506700

Genome Context

<gbrowseImage1> name=NC_008405:19579286..19582722 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:19579286..19582722 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcccgaccacgtcgtcgccgccaccggcggcggcggcggcgagcgagctgcccaccagtaccatgtcactgacgacaccgatgctgccacggcatcggaagaagtcggcggcggcggcggctggcctcgcgcgctgctccggcgcgggtgggagctggcagggaaggccgccgtcgccggcgccgccgcgacggccgctccggtcgtcgtcccgcccgtcatgctcctcaccgccgccggcctcgcgctgtccctccccttcgccgcctacctcgccaccctcgccgccacccaccgcctcatggccgccctcctcccaccccacgaatccggcctcgacggcgccgccgtcgaacaagaactcctcgacgcgttctaccatttcagcacaacagatcaggaggaagacggcggcggcggcggcgtcggaatcggattggcatcgccgccgccatcggtggatgaaccagtttccttccaagaatcatctgtatcaagaaatgggggaaaaatcgaggacggcacaaccaaggagacagtgtcactgaccactgatgttcctgaatttcctgaattgcctgtggttgagacaagggaagaagatggagttattcctgtccagcaattaggccaagatcatcatcatactcatgtattggacacaggggataaagcagaggagtctaccatttccagtgtttccggaacaccagttgaaatattcactgacaaagacaatgtggagaagggagtggtcgaagacacagtagtcgtcgaggccgcggtagtggaacaattggcaagcaatgcgggtatcgtcgcgcaggagttggtcgacacgaacgtggcgattgttgctatttcagcgcccgaaaacgaggcgacgacaccgacgagtgaccttgtcgctcgcgtgtcagaggaagttgtgggaagttcatgtgatggtgagatgcaagaaaccgctgtggtggatgataccatgagggaactaagtgatgcaaacatggatgaagatgtgcaacaccatgatcaaagagttgtttgtagttctgtcttgatggcttctccattggctgttggtgattatgaggatgtaatgtccagcgggagcacacaagacatccctgaagtttgtgatgagacatcccagcctggtcaggagcatgatcagtctgatgggtttgaggcaaaagtaatttctggggacaaggatctctacaccgaagaacacgtaaggcaacagctcgaaacattaagaacaataacagggtacagatctccattttcttcgacactcgaaggtgagctggctgccctttacctgttcatcggagtggagccccctgtcagctcgaggaatgcctctgacctaatggagatcaatgcaaaactccggctgttgaaatcaatcgttggtgttgattga</cdnaseq>

Protein Sequence

<aaseq>MDPDHVVAATGGGGGERAAHQYHVTDDTDAATASEEVGGGGGWP RALLRRGWELAGKAAVAGAAATAAPVVVPPVMLLTAAGLALSLPFAAYLATLAATHRL MAALLPPHESGLDGAAVEQELLDAFYHFSTTDQEEDGGGGGVGIGLASPPPSVDEPVS FQESSVSRNGGKIEDGTTKETVSLTTDVPEFPELPVVETREEDGVIPVQQLGQDHHHT HVLDTGDKAEESTISSVSGTPVEIFTDKDNVEKGVVEDTVVVEAAVVEQLASNAGIVA QELVDTNVAIVAISAPENEATTPTSDLVARVSEEVVGSSCDGEMQETAVVDDTMRELS DANMDEDVQHHDQRVVCSSVLMASPLAVGDYEDVMSSGSTQDIPEVCDETSQPGQEHD QSDGFEAKVISGDKDLYTEEHVRQQLETLRTITGYRSPFSSTLEGELAALYLFIGVEP PVSSRNASDLMEINAKLRLLKSIVGVD</aaseq>

Gene Sequence

<dnaseqindica>1..1218#3078..3293#atggatcccgaccacgtcgtcgccgccaccggcggcggcggcggcgagcgagctgcccaccagtaccatgtcactgacgacaccgatgctgccacggcatcggaagaagtcggcggcggcggcggctggcctcgcgcgctgctccggcgcgggtgggagctggcagggaaggccgccgtcgccggcgccgccgcgacggccgctccggtcgtcgtcccgcccgtcatgctcctcaccgccgccggcctcgcgctgtccctccccttcgccgcctacctcgccaccctcgccgccacccaccgcctcatggccgccctcctcccaccccacgaatccggcctcgacggcgccgccgtcgaacaagaactcctcgacgcgttctaccatttcagcacaacagatcaggaggaagacggcggcggcggcggcgtcggaatcggattggcatcgccgccgccatcggtggatgaaccagtttccttccaagaatcatctgtatcaagaaatgggggaaaaatcgaggacggcacaaccaaggagacagtgtcactgaccactgatgttcctgaatttcctgaattgcctgtggttgagacaagggaagaagatggagttattcctgtccagcaattaggccaagatcatcatcatactcatgtattggacacaggggataaagcagaggagtctaccatttccagtgtttccggaacaccagttgaaatattcactgacaaagacaatgtggagaagggagtggtcgaagacacagtagtcgtcgaggccgcggtagtggaacaattggcaagcaatgcgggtatcgtcgcgcaggagttggtcgacacgaacgtggcgattgttgctatttcagcgcccgaaaacgaggcgacgacaccgacgagtgaccttgtcgctcgcgtgtcagaggaagttgtgggaagttcatgtgatggtgagatgcaagaaaccgctgtggtggatgataccatgagggaactaagtgatgcaaacatggatgaagatgtgcaacaccatgatcaaagagttgtttgtagttctgtcttgatggcttctccattggctgttggtgattatgaggatgtaatgtccagcgggagcacacaagacatccctgaagtttgtgatgagacatcccagcctggtcaggagcatgatcagtctgatgggtttgaggcaaaagtaatttctggggacaaggtgagtcgattatacatatatactccaattatttccatagttaactgatcacttggatcaagaatgttaatataaacttctgttctagctaattagacataacacacattgtacatgacacttaaaatttttgtcactctaaaatatattgcatatttttttgagggaaaaaatatattgcatatgagtatgatcactacatctgcctgtttgttaccaagggctggcctcataaaaagattccttacaaacatgttgagtcagttggcaataggacatttccctccagaaaaaaaaactaacaatggcagatgaaaatggttggaacatgaactgtttacatgcaaaatatgctacaatttatctaaatagcttgctccaggacaatggaacatggcattgacacattattacatcttgagcttttttacagtttctatgaaggtaccggaaagataaattatgggtaccatgtgaactgcttactatgattatctcctacagtgtcttgggtaaaataaaaacttgttccagtgtaaattaaatggtctcataaacatgaatggcagaacacacaaacttgtctgtgagtaacaatatcaattgcaaataattgatagtaactgaatatacagtccttgctgcttatgttcatggttttaactacaaacaattgatagtccaataggaacatcggcagtggcatggtaggcattgtatctccttccattcttcaatgaagtaatttatttttattgttagcagtagtaaactagtaactgctgcttgttgtatgccaatgatggcaggtcatataccaacatgttgcataacaagtggaaaatctacagttattagtttcaagactttgaattgtactgaatatacgtgtaaaactaaaaccaagtttttgctttagtacacttgcagacatagtagtgtcaaattttggatcggattagaaggagagcgttgctcccatccagcaacttgtaccggcaggtacagagataaatccatccgtccatgttagaagggtacgatcgggaaatacagaaaggagttgcgccctcgctttctccttttcgctctttctctgtttcctccctccgcgcagcgccgctccttttcgctcttttttcgtttcctcactccgccttaaacggatcagacgccgccgcctcgcctcccacgaagcactttgccgccggctgcctcctacagatcagccgccgccaccgcctcgcttcccacggagcacctcgccgccgcctcaaacggatcagccgccgccacaccgcctcctcccacgaagcaagtcgccgccgacaaagcaactcgccgccaacaaagcacgaagcaactcgccgccgcctcccacggatcggatcagaaaggaatggctgagatttggtagaaaaccctatttccctccccggacactcacactcctacgcgaaaagacaaatttacccttccaccactcgaaatattctggtacctcctcatgagcaaatttgtacctggaggtaccacttattttctaccgcccgatttcgctgattgaatggctgagatttggtaccagacagtaccgatggtacctgctgaatgggagcaaaactcttagaaggaacattctttgcaaatatgtcaagcagtaaaatcacatgcaaagtaacgactcgaaatgctaaactgaactagttttctatcattgtgtgtaatgggcaggaactgattattgcactattcataattaactaaattcaataaactttggcttccgtctagtattatccatacttttgcgatgtttcttcattgagatgtcatgataattctttgttttctaccaggatctctacaccgaagaacacgtaaggcaacagctcgaaacattaagaacaataacagggtacagatctccattttcttcgacactcgaaggtgagctggctgccctttacctgttcatcggagtggagccccctgtcagctcgaggaatgcctctgacctaatggagatcaatgcaaaactccggctgttgaaatcaatcgttggtgttgattgaattatctcgagggcgatcaatcaggacgtttttggttttgattatacatctatggatgcatatcatacagtttaacaattctctgtacatccaagacagtcgatcgagactgtttatcaatcagtagagtacactgcatctgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0506700, RefSeq:Os12g0506700