BGIOSGA013852

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Revision as of 10:08, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013852| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013852, complete gene.| tag = OsI_141...")
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Gene Name

BGIOSGA013852

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013852, complete gene.

LocusTag

OsI_14141

Ensembl Transcript ID

BGIOSGA013852-TA

Ensembl Protein ID

BGIOSGA013852-PA

Length

7425

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:39035527..39042951

Sequence Coding Region

39035527..39035663,39037261..39037371,39037780..39037862,39038070..39038187,39038286..39038497
,39038950..39039434,39039514..39039584,39039976..39040232,39040604..39040758
,39041142..39041425,39041514..39041631,39042363..39042545,39042637..39042951

Genome Context

<gbrowseImage1> name=IndicaChromosome03:39035527..39042951 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:39035527..39042951 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGTCCCCTCCTCGCCTTCGCGGCGGTATGCGCCCTTCTCGTGGCTGCCGCAGCGCCGGCGGCCGCGGAGGAGGAGAAGGCGAACAAGTTCCGGCAGCGCGAGGCCACCGACGACATGCTTGGATACCCCCACCTTGATGAAGATGCTTTATTGAAGACCAAGTGTCCAAAACATGTAGAGCTGAGATGGCAGACTGAAGTTAGTTCCAGCATTTATGCAACTCCGTTGATCGCTGATATCAACAGCGATGGAAAGTTGGAAGTAGTGGTGCCATCATTTGTTCATTACCTGGAAGTTCTTGAAGGCTCTGATGGGGACAAATTGCCAGGATGGCCTGCATTTCACCAGTCAAATGTTCATTCAAGTCCACTTCTATATGATATTGACAAGGACGGGACACGGGAAATAGTTTTGGCAACTTACAATGGTGTAGTGAATTTCTTCAGGGTATCAGGTTATATGATGATGGACAAGCTAGAAGTACCTCGTAGGAAGGTACACAAAGACTGGTATGTTGGGCTGAATCCAGATCCCGTTGACCGCTCCCATCCAGATGTTCATGACAGCTCAATTGCAAAGAAAGCTGCTTCTGAAGAATCTCACCCAAATATTCAGGACAAGCCAGTTGTGAATGAATCTTCTAAGGAATCCCAGTCACGGAGCACAAATGACTCAACAACACAAGGAGTTGATTCCATGAAACATGCGTCTAAGGAAGAGCCAGTTGAAAGTAAACCTAATTCTACCCGAGGACAGGAGAATATGGATGTGTTAAACAATCTAAACAGCACAGATGCTGGGAACAACTCTAGTTTAAGTACTACAACAGAGAATGCATCACATGTTCAGAGAAGGTTGCTTCAAACAGATGAGAAAAGTAATCAAGCAGGAAGCTCAGAAACTGATGCAAGTGATACCGGAACAGCAAAAGCAGCTACTGTTGAAAATAGCGAGCCTCTAGAGGCTGATGCTGATGCATCATTTAATTTGTTTCGGGATGTAGAAGATCTGCCTGATGAGTACAATTACGATTATGATGACTACGTTGATGAAACCATGTGGGGAGACGAGGACTGGAAAGAACAACAACATGAAAAGGCAGAAGATTATGTGAGCATAGATGCTCACATCTTGTCCACCCCAGTGATTGCAGATATTGACAGAGATGGCATACAAGAAATGGTGATTTCTGTATCTTACTTCTTTGACCACGAGTATTATGATAAACCAGAACATCTAAAGGAGTTAGGAGGGATTGACATTGGCAAATATATTGCAAGCAGTATAGTTGTTTTTAACCTTGACACAAGACAAGTCAAATGGACTGCAGAACTTGATTTGAGTACAGATAGTGGAAATTTTACTGCCCATGCATATTCTTCGCCGACCGTGGTTGATTTGGATGGTGATGGAAATTTGGATATTCTTGTTGGAACTTCCTTTGGCTTGTTTTATGTTATCGATCATCGTGGTAAGGTTAGGAACAAGTTCCCACTTGAGATGGCGGAGATTCATGCACCAGTCATTGCAGCAGATATCAATGATGATGGGAAAATCGAGATGGTCACTGCTGATGTCCATGGCAATGTAGCAGCATGGACTGCAGGGGGAGAAGAAATCTGGGAGCGCCCTACTGTTGGTGATGTTAATGGAGATGGTCGCACTGAAGTTGTGGTCCCAACCGTGTCAGGAAACATATATGTTCTTAGTGGAAAGGATGGCTCAAAAATTCAGCCTTTCCCATATAGAACGCATGGAAGGATCATGAGTCCTGTTCTATTGCTTGACATGAGCAAACATGATGAAAAGTCTAAAGGCCTCACCCTTGCTACTACATCCTTTGATGGTTACTTGTATTTGATTGAGGGCTCAAGTGGCTGTGCAGATGTTGTTGACATTGGAGAGACCTCGTACAGTATGGTTTTGGCTGATAATGTTGATGGTGGAGATGACCTCGATCTTATTGTTACTACCATGAATGGCAATGTCTTCTGCTTCTCCACTCCCTCTCCGCACCATCCACTTAAGGAATGGAGATCATCAAACCAGGGAAGAAACAATGCTGCATATCGTTACAACCGTGAAGGTATTTATGTTAAACACGGTTCCAGAACATTCCGTGACGAAGAGGGCAAGCATTTCTGGGTAGAGTTTGAGATTGTGGACAAGTACAGGGTTCCTTATGGGAACCAAGCTCCTTATAACGTGACGGTTACTCTACTTGTCCCTGGGAATTATCAAGGAGAAAGGCGCATTGTGGTTAATGCAGCTTATAATGAACCAGGCAAGCAGCGGATGAAGCTTCCCACAGTTCCTGTGAGAACCACAGGAACTGTGCTTGTGGAAATGGTTGACAAAAACGGGTTCTACTTCTCTGACGAGTTCTCGCTCACCTTCCACATGCATTATTACAAGCTTCTGAAATGGCTCGTGCTTCTTCCAATGCTTGGGATGTTTAGCGTTCTTGTCATCCTGCGGCCACAAGAAGGCGCTCCGTTGCCATCATTTTCAAGGAATATTGATTAG</cdnaseq>

Protein Sequence

<aaseq>MRPLLAFAAVCALLVAAAAPAAAEEEKANKFRQREATDDMLGYPHLDEDALLKTKCPKHVELRWQTEVSSSIYATPLIADINSDGKLEVVVPSFVHYLEVLEGSDGDKLPGWPAFHQSNVHSSPLLYDIDKDGTREIVLATYNGVVNFFRVSGYMMMDKLEVPRRKVHKDWYVGLNPDPVDRSHPDVHDSSIAKKAASEESHPNIQDKPVVNESSKESQSRSTNDSTTQGVDSMKHASKEEPVESKPNSTRGQENMDVLNNLNSTDAGNNSSLSTTTENASHVQRRLLQTDEKSNQAGSSETDASDTGTAKAATVENSEPLEADADASFNLFRDVEDLPDEYNYDYDDYVDETMWGDEDWKEQQHEKAEDYVSIDAHILSTPVIADIDRDGIQEMVISVSYFFDHEYYDKPEHLKELGGIDIGKYIASSIVVFNLDTRQVKWTAELDLSTDSGNFTAHAYSSPTVVDLDGDGNLDILVGTSFGLFYVIDHRGKVRNKFPLEMAEIHAPVIAADINDDGKIEMVTADVHGNVAAWTAGGEEIWERPTVGDVNGDGRTEVVVPTVSGNIYVLSGKDGSKIQPFPYRTHGRIMSPVLLLDMSKHDEKSKGLTLATTSFDGYLYLIEGSSGCADVVDIGETSYSMVLADNVDGGDDLDLIVTTMNGNVFCFSTPSPHHPLKEWRSSNQGRNNAAYRYNREGIYVKHGSRTFRDEEGKHFWVEFEIVDKYRVPYGNQAPYNVTVTLLVPGNYQGERRIVVNAAYNEPGKQRMKLPTVPVRTTGTVLVEMVDKNGFYFSDEFSLTFHMHYYKLLKWLVLLPMLGMFSVLVILRPQEGAPLPSFSRNID</aaseq>

Gene Sequence

<dnaseqindica>1..137#1735..1845#2254..2336#2544..2661#2760..2971#3424..3908#3988..4058#4450..4706#5078..5232#5616..5899#5988..6105#6837..7019#7111..7425#ATGCGTCCCCTCCTCGCCTTCGCGGCGGTATGCGCCCTTCTCGTGGCTGCCGCAGCGCCGGCGGCCGCGGAGGAGGAGAAGGCGAACAAGTTCCGGCAGCGCGAGGCCACCGACGACATGCTTGGATACCCCCACCTGTGAGTCACCGCTTGCCTCTCTCCTTCACATGGGTTCTCCTGTCGCTTTCGATTTGGAACTGAACTGCTGCTAGATCCTTGGGACTGGAAGCGATCTTAGATGGTTGGTTGTTTTCTGTGGCTCCTCGTAATTTCTTAGTAGTTAACGACCTTAATCACCTTATTATTTCTGTAGGAGTGTTCAATTTATGCTCAGAATGACACGATGTGCAGAATCTGTTAAAACCTCTACACTTTTTTTTTTGCATTGGAAAATACTTCTACTTCATTCGAGCATTGATGTATCAGGGATTTCACAAAGCAATTAACTCATTTTATGGAATAGTTAATTTGAATATGGAAATGGTGATTTCGTCCTTCTTTTCATTTAGGTCACCCAATCTAGTGTTTCATAATCTGGATTTGTTTCAACTGTTATGCAGGCTAGTGTTTCATAATCTGGATTTGTTTCAACTGTCATGCAGGCTAATGTCACAAAAAAGAAGAATATATGCAATTTCTAGAGTGTGAAGATTTACTCTTCTTTTTAAAAAACTTGGATCGCTTAATTTTTGTTCCATTTAATGGGCTCATATGATACATGTGGTGATTGATACCCTGCATTAAGTAATAGGCCTTATTGGGATTAGCGTATTTGTGACCAACCATACTATGCCTGGCAGATTTGTTCATTCAGTTGATTCTGTGTAGTGTGAAATTATTATTATATTCTCTTGTATCTTAAAAGAATTAGTACTCACTGATCCCCTCCACCACCCACATACAATAAAATCTACATTTATAATTGGTTCTGTAGGTAAAAATGGATGTAAAATCTGTACATCGCTTGAGGTTTCTAGATCAGTTATTGTAGTTCTGTTGTTTTTGCGAGTGCTGTAAAAGCGCAAACAGCTCTTCAGATGTGTTCCCTTCAGAGTTAATCTTAGTGTCCTTTGAAATAGATTTGATCATATATCCTCTCTTTAGATAAAAAAAAGAGTATTAAACCTCCTGTGCCACTGACATATAGGGTCATCTAAGGTCACTGACATGTAGACTGAAGGGTAAATCCTCAATTTCAATCTAAAAGCAGGTATATGATCAATCATTACTTGAATCTTTGATACCATTTCACTGTCAACCTGAATTTCATTGGCGTGCTAATTCTTAAAATATCTGCACAAATATATATGATATATTAGTCAGCCATACAGGGGGCAAAAAAGCATTCCTGTTAAATATAAATTCTTATTGATGTTTTCATCTGCAAAAAGGATTAAGAGATTAAGAGTAAGATTGGCTGTTACAACATGTGGATCATCAAATTGTTATACTGTAGTATTGTAGTTTCTCAGAGAAAAATCACAGCCTAAAGCATAATGCATTTATCCATACCACTAATTTCAACTGAGCACCTGCAAAATGCCACAACTTATGGAGCAAGTTTATTAATTCAGTTAGCTACCATGATCCCCGTGTTTTCAATTTGTTCAGGGGGACATATGAAAGATTTTACTATTGTGGACACTACATCTTTGAAAGTTACCTAGACAAATAATGTTGATCATCTGTACGGATAGATGCATTCATCGATGTAATAACTATATATTCTCCGCAGTGATGAAGATGCTTTATTGAAGACCAAGTGTCCAAAACATGTAGAGCTGAGATGGCAGACTGAAGTTAGTTCCAGCATTTATGCAACTCCGTTGATCGCTGATATCAACAGGTAAAATATCCTGGGAAATGATTTGGCTTTTTTTTGGCTTTAGGACATGTTAATCTTTGTCAGATATCCTTCTCATTATCTTCTTCTATTTGACTTCATGTTTCCATCATTATTTGCTTGTATAAAGATAAATCTATTGTTCTATGCTCTGGAACAGCATCCACTTCTGAATAAACCTTCTGTTAGTTACTATAGATTATGTTCAAAATCAAATAAGTACATCATTGCCATAAACTGAATTTTTTTTCCTCTGTATGATTTTGTGCTTCAAACTATGGACACTGTGAAATATCATATGCATGTTTACTTTGGATTTTTAAACGTGGATGACTTTTTTCTAGTTATTGTCTTAATTTCTTCTTTAGTCTGCTCTGGGCACACTTTAATGATAATCTTTTGGTGTATTAGCGATGGAAAGTTGGAAGTAGTGGTGCCATCATTTGTTCATTACCTGGAAGTTCTTGAAGGCTCTGATGGGGACAAATTGCCAGGTGTGTGGTTTCACATTACCGATTAGCATGTTATAGTGGTCATCATTAGCTCTTTGCTATAAATTCTGGAAAACCATCAATTGAATGAATAGGTCTAAGATGTTCTACCACATTTTAAAGGTCCTGAAAGTTTGTGCTATAATTAACAAAAGAATTGGTTTAATGTTGTTTATTTATTAATATATATTGTTGTGAAATTGATTCCAGGATGGCCTGCATTTCACCAGTCAAATGTTCATTCAAGTCCACTTCTATATGATATTGACAAGGACGGGACACGGGAAATAGTTTTGGCAACTTACAATGGTGTAGTGAATTTCTTCAGGTAAGGAACTTGGTGCATATCTTCTTATGTTTTCACTGAACATGTAAAATTATTTGTTGAGTTTGTTTGACATGGTAATTTATTTGTTTGTTATGTAGGGTATCAGGTTATATGATGATGGACAAGCTAGAAGTACCTCGTAGGAAGGTACACAAAGACTGGTATGTTGGGCTGAATCCAGATCCCGTTGACCGCTCCCATCCAGATGTTCATGACAGCTCAATTGCAAAGAAAGCTGCTTCTGAAGAATCTCACCCAAATATTCAGGACAAGCCAGTTGTGAATGAATCTTCTAAGGAATCCCAGTCACGTAAGTTATCTTATAAGCTATAATCACACTATTCACTGGTCAATCATAAGAATCCCTTCTTTTCATCTGTTGCTTTAGTAGTTTGGCTGCAATGCTTATTCTCTAGTCACTAGTATTTTACAGGCTCTACCTTGAAAGTCTGTGGCTCTGCGCGCTGTTTAGGTTAAATGGTACTTTAGGATCATTAGTTCAATATTGATGTTTGTTGAACATATTTGTAGGCTGTCCTTAGATATATAGATAATACAGTGGAGCCTGGATATTATAACTAGATTATGTGATGTTACCAACCAGAGGATGGAAAATGCTCTAAAGAGAGTGGTGCATGCACGTAGTAACGATTATGCTACTCCAGTACTCTGATTTTAGTAACAGAGAATCCACACTCCGTGTGTAGTCTATAAGATCATTTACAAGAGATGCATTATAGTTTTATTTGTTTATCACTGTAGGGAGCACAAATGACTCAACAACACAAGGAGTTGATTCCATGAAACATGCGTCTAAGGAAGAGCCAGTTGAAAGTAAACCTAATTCTACCCGAGGACAGGAGAATATGGATGTGTTAAACAATCTAAACAGCACAGATGCTGGGAACAACTCTAGTTTAAGTACTACAACAGAGAATGCATCACATGTTCAGAGAAGGTTGCTTCAAACAGATGAGAAAAGTAATCAAGCAGGAAGCTCAGAAACTGATGCAAGTGATACCGGAACAGCAAAAGCAGCTACTGTTGAAAATAGCGAGCCTCTAGAGGCTGATGCTGATGCATCATTTAATTTGTTTCGGGATGTAGAAGATCTGCCTGATGAGTACAATTACGATTATGATGACTACGTTGATGAAACCATGTGGGGAGACGAGGACTGGAAAGAACAACAACATGAAAAGGCAGAAGATTATGTGAGCATAGATGCTCACATCTTGTCCACCCCAGTGAGTGTACCTTCTGTTTCGTTTTGGCTATTTCTGCTTGTTCATTCTATAAATATTCATGAATTATTTTCCACTACAGGTGATTGCAGATATTGACAGAGATGGCATACAAGAAATGGTGATTTCTGTATCTTACTTCTTTGACCACGAGTAAGGCTGCTTTCTCTGCTACAAGTGCATTTTGATAACATAACAAAATATACTGGTTATTTATGTTATCATGTGATGACATTTGTTGTTATGTAGTTTAGGTTACTTTTTTAAAACCAGAATCCTTTTATTCTCCCTGATTTTGGGTCGGTTGGTATGTGGTGGCGCTTTATGACAGTTTTCACTTCTCAGTTAGGTTCCAACAATGAATCAAAATATGCCGACCTAAGGTGTTTGCTTGTAATTTCCCTTCTGTCTATTGGTTATGATTGAAATACTCTCTCAATGCAAAACTTGTGACCATAATATGACTTAATGATTTCTTGCCTAATTCCTGTGTTGTTGTGTTGGTGTTTCAGACAGTCACTAGTAACTTGTCTTTTACTGACAGGTATTATGATAAACCAGAACATCTAAAGGAGTTAGGAGGGATTGACATTGGCAAATATATTGCAAGCAGTATAGTTGTTTTTAACCTTGACACAAGACAAGTCAAATGGACTGCAGAACTTGATTTGAGTACAGATAGTGGAAATTTTACTGCCCATGCATATTCTTCGCCGACCGTGGTTGATTTGGATGGTGATGGAAATTTGGATATTCTTGTTGGAACTTCCTTTGGCTTGTTTTATGTTATCGATCATCGTGGTAAATTCTTAACCTCATAATATCAATTCTGAATCCATAAACAGCTTTAAGCTGACTTATTGTTTTCTATGCTGTGTATATCTAGCTCCCGTAGCATAAAGTTTTTTTTTTTCTAGAACAACAGAATATGTTAGTGTAGAAGTAACAGTATGTTTCAGCATGCTTTTCTTTGCTTTGTTTGGACAATAAGGACATGTTCACTGAAAATCCTCACAAATACAATAAAATCTCACTTTCAGTTCTGTTGCTTTCATCAATATGTTTCAGCATGCTTCTCTTTGCTTCGTTTGGATAATTAGGACATGTTCACTGAAAATCCTCACAAATACAATATATTCTCACCATAAGTGCTGTTGATTTTATCAATCTAGGTAAGGTTAGGAACAAGTTCCCACTTGAGATGGCGGAGATTCATGCACCAGTCATTGCAGCAGATATCAATGATGATGGGAAAATCGAGATGGTCACTGCTGATGTCCATGGCAATGTAGCAGCATGGACTGCAGGGGGAGAAGAAATCTGGGAGGTTCATCTTAAGAGTCTTATCCCACAGGCAAGTTCAAACCCGTTTCTTTTGTGGGTTCTAACTGATTGTGTATATTATATATTTTTGGTTGTCTATCTATATCTAAACATACCCTTACCTTTGGCAGTCTATGGACTGCAAATTGCTACATGTCCTGAAGCTGCTTGCTTGTTTAGCTCGGTAGAATACTATGGAATCTTTCTTGTCAGATTGTCACAATTTATTTCCATCTTGTTCTATTACCTTTTTACCGAGTCAGAAATCAGAATATCATAACTTGGTTTAGTATTACTATATGCTTTCACTGTCTTCACTGGTGCATTCAGTTTTATTTGGGCTATGCTTTTCATACCCTCTGATTTGCCATTGTCATATGATGACAGCGCCCTACTGTTGGTGATGTTAATGGAGATGGTCGCACTGAAGTTGTGGTCCCAACCGTGTCAGGAAACATATATGTTCTTAGTGGAAAGGATGGCTCAAAAATTCAGCCTTTCCCATATAGAACGCATGGAAGGATCATGAGTCCTGTTCTATTGCTTGACATGAGCAAACATGATGAAAAGTCTAAAGGCCTCACCCTTGCTACTACATCCTTTGATGGTTACTTGTATTTGATTGAGGGCTCAAGTGGCTGTGCAGATGTTGTTGACATTGGAGAGACCTCGTATGACATTTCTTGTCTGCTTTGCAATTCTGTACTCTGTACAATTTCTGGATTCAACAAAGTGGCTCACTTCTTTGCATATTGACAGGTACAGTATGGTTTTGGCTGATAATGTTGATGGTGGAGATGACCTCGATCTTATTGTTACTACCATGAATGGCAATGTCTTCTGCTTCTCCACTCCCTCTCCGCACCATCCACTTAAGGTACATAGCATGTTTTTTTATGTCAATAATTTAGAGTAAATTACACAAAACCATAGGTATTGTGTCCAAGTTACACAAAACCACAGGAGTTTTAGCACGTGGCATAGAACCCCTATTGTTATGTTACCAATGTTTCAGAAAACCACACAATTGCCAAATTTTTCTTAAATTTGACATGTGGGATGAAACTTTTATATGCTCATAGAACCACGGTGGATGAAAGAACTCATAATCCCACGTCAGATTTGGGTCAAATCATGTTCAGATTTGGGTCAAATTGGTCAATTGCATGGTTTTGTGAAACACTAACACCATAATACCCATGGTTACGTGCCACGTGTCAAAACTCACGTGATTTTGTGCATACTCATAATTTAACTCAAGTCAGTAGATTTTTTTGTGAATCCTCCGTAACTTATGTTTAATCTGGTTTGGCTGAGAGTTGCATATTTCCTTTAAACCTTATATTTTTTATGGATGTTGAAACAAGATAGTGGAAGTACTGCTGACAATAGGATAACAAAATCACGTGATTTTGTGCAATTTACTCATAATTTAACTCAAGTCAGTAGATTTTTTGGTGAATCCTCCGTAACTTATGTTTAATCTGGTTTGGCTGAGAGTTGCATATTTCCTTTAAACCTTCTATTTATTCATGGATGTTTAAACAAGATAGTGGAAGTACTGCTGACAGTAGGATAACAATATAATTCCTTCCAATTTAATGGTAGGAATGGAGATCATCAAACCAGGGAAGAAACAATGCTGCATATCGTTACAACCGTGAAGGTATTTATGTTAAACACGGTTCCAGAACATTCCGTGACGAAGAGGGCAAGCATTTCTGGGTAGAGTTTGAGATTGTGGACAAGTACAGGGTTCCTTATGGGAACCAAGCTCCTTATAACGTGACGGTACATTCTGTCAACCCAATGGCTTGTCTGATGGATATTCCAAATATTTTTATTTAACTTCCAACTACCCTCGCTTACCATTGGATTTCAGGTTACTCTACTTGTCCCTGGGAATTATCAAGGAGAAAGGCGCATTGTGGTTAATGCAGCTTATAATGAACCAGGCAAGCAGCGGATGAAGCTTCCCACAGTTCCTGTGAGAACCACAGGAACTGTGCTTGTGGAAATGGTTGACAAAAACGGGTTCTACTTCTCTGACGAGTTCTCGCTCACCTTCCACATGCATTATTACAAGCTTCTGAAATGGCTCGTGCTTCTTCCAATGCTTGGGATGTTTAGCGTTCTTGTCATCCTGCGGCCACAAGAAGGCGCTCCGTTGCCATCATTTTCAAGGAATATTGATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013852

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