Os12g0507200

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Revision as of 10:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0507200| Description = Similar to Eukaryotic translation initiation factor 5A-2 (eIF-5A-2) (eIF-4D)| Version = NM_001073375.1 GI:115488711 G...")
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Gene Name

Os12g0507200

Description

Similar to Eukaryotic translation initiation factor 5A-2 (eIF-5A-2) (eIF-4D)

Version

NM_001073375.1 GI:115488711 GeneID:4352300

Length

2946 bp

Definition

Oryza sativa Japonica Group Os12g0507200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19607464..19610409

Sequence Coding Region

19607662..19607787,19608930..19609052,19609138..19609194,19609283..19609357,19609909..19610010

Expression

GEO Profiles:Os12g0507200

Genome Context

<gbrowseImage1> name=NC_008405:19607464..19610409 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:19607464..19610409 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggactccgaggagcaccacttcgagtcgaaggccgacgccggcgcctccaagacctacccgcagcaggctgggaccatccgcaaaaatggctacatagtcatcaagaaccgcccctgcaaggttgttgaggtttcaacctctaaaactgggaagcacggtcacgccaagtgccactttgttgcaattgacatctttactgccaagaagctcgaagatattgtgccatcttctcacaactgtgatgtcccgcatgtgaaccgtacggagtaccagctcattgatatatctgaggatggatttgtgagtctgttaactgaaaatggcaacaccaaggatgacctcaggctccctactgatgataacctgcttagtcagatcaaggatggatttggagaagggaaggacctggtggtgactgttatgtctgccatgggagaggagcagatctgcgcgctgaaggacatcggcccgaagtaa</cdnaseq>

Protein Sequence

<aaseq>MSDSEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVV EVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHVNRTEYQLIDISEDGF VSLLTENGNTKDDLRLPTDDNLLSQIKDGFGEGKDLVVTVMSAMGEEQICALKDIGPK </aaseq>

Gene Sequence

<dnaseqindica>199..324#1467..1589#1675..1731#1820..1894#2446..2547#cccccctcgccgtcgccgccgccgccgccgccgacgccgccgcgaccacctctcgcaaggtactccaagccctcctcctccctccgcgcagaccaacacctccatccatcctcctctcttggactgatcgatggctccccaattttgctggagattttcaggggattttgtaggggtttctgatccgaggagcgggcgatgtcggactccgaggagcaccacttcgagtcgaaggccgacgccggcgcctccaagacctacccgcagcaggctgggaccatccgcaaaaatggctacatagtcatcaagaaccgcccctgcaaggttgattgattgattgattgattgattgattgatccatcgattgagatctcgatccgctaggtggggtagatagatctgtgcgtggtcgtctctccatctcgattgccgctccgtgtgagttcgcgggttgaatgggtgttaggactaatctgtgtttttttcttttttgtgttcagtgatcttgatcttggactgggtttctccctgcgtcgttagtgttaattctgatgcgtgccagagaaagttcattacttctctcgttcaatgtgactgtctgtaggtgctacagtaaggttgaattccaggtagatgttgatgttagatggtttaatcgttagcatgtcagactaggattactattactaatcgttttggcaaaaaaatttgttcagcttttgtaaaagttgattatgccaggtttaggtgcttgaaaaatgtatcttgcaaatcgaatgtcttaagcgaaaaagaaatgtctctggtttgagttatgtcattcggcgtggctaagataatgttctctcgcaagatagttctatttagcatcgtactagattttgcattcatcctgcacaggatcagattttggttcgtttcaccaactttggacaggggcatgtgagggcagctacactgtctgcaacttggtactagtagcacacggtttaccactgcggtgactcgcgtacttgttgcgtggtgtatgttgtgcctgcatatggtaatttctgtattgtggtccatgcaattaagtttcttggaccacttcttgggatagtagcagggtagcaaacttgtctgaaactcggtacttgcactgtgccaggtagtagtcatgggtgagctggtatattcttgctatgaattgtatagtgataaagtgcgtttatagttttacaattgtttagtctagcaatgctgggatggctctatgatgacctgttatcctagtcaatttattaattatgctagttatctctgtaataagtaccatttaccttgtctcccctttttagatttggatgccaagatctgtttttgtagagctaaagtcatattctccatctggcctcgtgttgatggctcattccttcactggattgttgatctctaatgttatgcgtttgaaacaaatatgtaggttgttgaggtttcaacctctaaaactgggaagcacggtcacgccaagtgccactttgttgcaattgacatctttactgccaagaagctcgaagatattgtgccatcttctcacaactgtgatgtcagtacatgtcttcaacactttctgagttagtgctgcttctggtcacacaaaatatgttaatgttaatgtgaatgttttataggtcccgcatgtgaaccgtacggagtaccagctcattgatatatctgaggatggatttgtaagtttcattctattcttcattgctcatgtttgttcatcattttgtgttatcgtgtgttgaatctatttgttttaaacatttttaggtgagtctgttaactgaaaatggcaacaccaaggatgacctcaggctccctactgatgataacctgcttagtcaggtatgtacaagttcggcgcatacttctggcttcttttgtttgcattagaagtaggttggcgcatacttctggcttcttttgtttgcattagaagtaggttgatgcttgtaccaattcttaattggtaatagaatgtcgaccaaatttggcagcttatttacatagttaaagagtattgctgtttttcatcggaaagtgattgtttttggaagtttgtacttttttcagtttcagagatgaattgaatctgaattttcctatctgtttttacatataatataaaaggcaaagctcctctggtatttgctagttttaatcgtcaacattttcagatgcaaggtcttcacaaatcaatgtttaactgatcaatactgtgtctctttcttatacaccggctgtttctattgagtatgccattgtgacctaaattagccccccaattaccatgtgcaccaaaagtccaatctgcatttatgaacaattttatttcttcataatattaaacaagagccttactatattttgatcttcatattcatttgcttgtgcagatcaaggatggatttggagaagggaaggacctggtggtgactgttatgtctgccatgggagaggagcagatctgcgcgctgaaggacatcggcccgaagtaaacctcacctgttccatgtgattactactgaactttcagttatgatcggtttgggtatgtaggaacaaggattctcttaaaacatacagagtcacaaccattaaggaattgtatcacaaaactcgtccccgccagtcaggctcttatttatctgggtctcgtcgtcgattcactgtcctaaatttcctgagttcctgtacccctaaaccaccatccctagacgttttgttaaccctttgggtatttggtagcaactttcattgtggagttggattgtgtgcttaaggtgaaaatatcatttgtgataaaccatgagactttgttgtgctgtcaccatgaccactgctattagcatctgcagatgcaacttttgacagttataccaaaagcttctccctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0507200, RefSeq:Os12g0507200