Os09g0387000

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Revision as of 07:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0387000| Description = Conserved hypothetical protein| Version = NM_001188888.1 GI:297726906 GeneID:9269780| Length = 5620 bp| Definition ...")
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Gene Name

Os09g0387000

Description

Conserved hypothetical protein

Version

NM_001188888.1 GI:297726906 GeneID:9269780

Length

5620 bp

Definition

Oryza sativa Japonica Group Os09g0387000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:13820850..13826469

Sequence Coding Region

13820850..13820900,13821937..13821991,13822030..13822106,13822541..13822609,13823153..13823260
,13823473..13823507,13823775..13823893,13824363..13824375,13825446..13826469

Expression

GEO Profiles:Os09g0387000

Genome Context

<gbrowseImage1> name=NC_008402:13820850..13826469 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:13820850..13826469 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaagcttgccacagttgcggcgggcgtcgtcttgtgccggcttgtggttgccggcggcgccgccctaggtgcctctgcgagcgccaccctcggcgcgtcttcgcgcacaccgcagctgcacgcctccgcgcgccttgcgctgcttgcagccgctcgtcgaggaggaggactcccattttctcccgtcaccctggctagcctcccactgctcccgagtgagatggagcttcccaccaatggtgataggccccgagagtggctatggctcatcgccttcgacgaccttgaggcgacctatcgcctcctctatcgacatcgtggagaggtccagcagagactcgatcgagcgagcgatctgcctatacttctctgggacgcaacggaggagcttctcgacggctctctccttgtcgtaggtgtcgtcgccgtactgcaccatcttctgcaaaagagtgttgagacggagggcaaagtcatcaacatcctcacctggcttgaaggccatgttctcccactccttgcggagtgcctgcagtgtggacttgcgagcgcggtcgctaccgatgcatgccgcagcgatggcgtcctaggcctccttggcagtccgcttctgggaaagcgagaactgcatctcgggcgggactgcagcaatgagggcatcccgcgcccgtcgatcctcgtcgtagtcgacgtcgccgtaccgaactgcctcccacatgtgccgcacctggagcctcaccctcatgaccgcagcccactcgacgtaggttgtcttggtgagggtaggccacccaccgccggggccgacttccctgatgacggcctgaaacccgtggtgtccacggtatcggtccggggagggagaaacgcgccgcctgtaacgaccgcgatctccgtcgacccaaccgttgccaccgagagcaccgccgtcatgcgcacccctgctagggggtccactgacgcgtccaagctcgtctgggctgccgccgccgcgcgcgctcccgccaggtacaccgccggttcaagtgaaaaggctgatgactggaggtgtgattctgcttgtcggttgagggaagaattcacaggcctgtgttcactgaggatatcttctcaacctattgtttccaccgatcatcgatctttaatgctagacttcctcagacccatgtgctttgtgaatacgaaggcagtggtcttttggtcttatttcttggtctcttcttttcatgctcatcagaactgggagagacaggatgttttaggggttttccaagtctctgaaatggagcagcaggtgtggtattatcatgggtatctagaaatgatcagcttctgctttgcttatgtacgcagccagagaaatatcttgtttcttcagataagaatatcattgttgctgcatggtttgtgtgacctgattagtatgttcttcgactcatggttcttcattcgttacatgatattgccctgttctaagcatggtatacaaggcaagccattcggtgggatactggattcatgggtctcctggcatggaagaagctag</cdnaseq>

Protein Sequence

<aaseq>MAKLATVAAGVVLCRLVVAGGAALGASASATLGASSRTPQLHAS ARLALLAAARRGGGLPFSPVTLASLPLLPSEMELPTNGDRPREWLWLIAFDDLEATYR LLYRHRGEVQQRLDRASDLPILLWDATEELLDGSLLVVGVVAVLHHLLQKSVETEGKV INILTWLEGHVLPLLAECLQCGLASAVATDACRSDGVLGLLGSPLLGKRELHLGRDCS NEGIPRPSILVVVDVAVPNCLPHVPHLEPHPHDRSPLDVGCLGEGRPPTAGADFPDDG LKPVVSTVSVRGGRNAPPVTTAISVDPTVATESTAVMRTPARGSTDASKLVWAAAAAR APARYTAGSSEKADDWRCDSACRLREEFTGLCSLRISSQPIVSTDHRSLMLDFLRPMC FVNTKAVVFWSYFLVSSFHAHQNWERQDVLGVFQVSEMEQQVWYYHGYLEMISFCFAY VRSQRNILFLQIRISLLLHGLCDLISMFFDSWFFIRYMILPCSKHGIQGKPFGGILDS WVSWHGRS</aaseq>

Gene Sequence

<dnaseqindica>5570..5620#4479..4533#4364..4440#3861..3929#3210..3317#2963..2997#2577..2695#2095..2107#1..1024#atggccaagcttgccacagttgcggcgggcgtcgtcttgtgccggcttgtggttgccggcggcgccgccctaggtgcctctgcgagcgccaccctcggcgcgtcttcgcgcacaccgcagctgcacgcctccgcgcgccttgcgctgcttgcagccgctcgtcgaggaggaggactcccattttctcccgtcaccctggctagcctcccactgctcccgagtgagatggagcttcccaccaatggtgataggccccgagagtggctatggctcatcgccttcgacgaccttgaggcgacctatcgcctcctctatcgacatcgtggagaggtccagcagagactcgatcgagcgagcgatctgcctatacttctctgggacgcaacggaggagcttctcgacggctctctccttgtcgtaggtgtcgtcgccgtactgcaccatcttctgcaaaagagtgttgagacggagggcaaagtcatcaacatcctcacctggcttgaaggccatgttctcccactccttgcggagtgcctgcagtgtggacttgcgagcgcggtcgctaccgatgcatgccgcagcgatggcgtcctaggcctccttggcagtccgcttctgggaaagcgagaactgcatctcgggcgggactgcagcaatgagggcatcccgcgcccgtcgatcctcgtcgtagtcgacgtcgccgtaccgaactgcctcccacatgtgccgcacctggagcctcaccctcatgaccgcagcccactcgacgtaggttgtcttggtgagggtaggccacccaccgccggggccgacttccctgatgacggcctgaaacccgtggtgtccacggtatcggtccggggagggagaaacgcgccgcctgtaacgaccgcgatctccgtcgacccaaccgttgccaccgagagcaccgccgtcatgcgcacccctgctagggggtccactgacgcgtccaagctcgtctgggctgccgccgccgcgcgcgctcccgccaggtacaccgccggtgcgtccacgcccggctgggctgccgccaccgcgcgcgtgggggtgcgcggctgcccactgctccgcccgctcacgagctgcctccctcatcagctcatcagcggggatgttgtaggcggagacagagctgctggagctactatcgcgcagagccttgagctctgtcgccgctgccgctgcttccacttccacccttgccgccgccagccttgacgcccttgctgccatcgcagacatggcacgctactggggggctgctgcgtggagaagaggctgcctctgacgagctgctgctcatcagtgcaggggaggaaggatgagcaggaacagccggtgttcctgcttctggctgaggacagagaggaactcgggaaggggatgagcaagagatgtctaggctatatgatagaatggctctgatgccagatgttagtagcaaaatctttactctcattgagaggatggcgctaggagagttggggcaattttgtctattttcttataaaagccataccatcccgggggaggttggatacatatttatagccatagctggctggctacaggctactctaaaaaatgagcgggatgctatcctagagagcatccaaactgaaagcataaagcatgctgtcctaaagagcatccaaactgaaattataaagcaaaaactgaaaaatgctgtcctaataggaatatatgttgtcctaaaaggagaaaacaacctaaaagtaaaagaaggaccacagagaccaaagaccaacagcacaaggacgcacaaggacttattctatcagaagagagggtggagttgcaaacataaaccacgtatgtaccttttgtcaggcttgattaatttgctttcagatgaaagcaattcattgctgcactactccttgaattgagggttccgatgcctagaaaacaacatcctctgcagatgtttaaggctgtatagaggaaattaaattaagatggtatcatccttattcttccatctctcactggttgcctactaatatccttgtcaatgttgctatcatgacaaatatattttcttggtttcaggttcaagtgaaaagtatgcttaggcggaggatagtagtgcgaaaagttggacattcatcaattccatcactgattgtgtttatttgattattccttcacatactctttttttttgggggagggaaccaactggtggtgctctttcttctttgtccttatataagagagaaatggtacagttgctttggtgtctcactaatttgatatagttggggtccaccccgcctgcttaaccggggagccatccaacctggatctttggattaattgcacattctcaaagtacaagtattttagttctatagactgaatcacagtattgttttttccaccgcttttgcatatccgatttaagttttttttggtacattttcatggtagaaagaaaccagcgtgtaagctctgtggcattgcactccaggtgtttctggttttgccttatgtaatagtttgaattttgctttgtggtatggtgcttgcagggctgatgactggaggtgtgattctgcttgtcggttgagggaagaattcacaggcctgtgttcactgaggatatcttctcaacctattgtttccaccgatcatcgatctttaatgctaggtgagcttcctgtgtacctgtatttcatgtggttagctctcaagcaaagtggagtttgttttttgttcttctatactgtaataaaaagtgccttatcttattttaatttggttttgggtaatttaatcttgagaacgaaatgtgttgcgatatgactcacttgagaaattcatgtagttcaaaagtatacatgtgattgtatgattttcgccgttctatatgaaatgttttctacatctttgaatttatcaaacccatgtttttaagacttcctcagacccatgtgctttgtgaatacgaaggtacacttattgaactgggtgtatgaaataggtggctgcccatatctgaaattatactgaaaaatgaattaaataatcacgcatgtcatatcccaaacaaaaaaactgtggcgcgccttcacagctttttttgttgaagctgtgaagaacccttgactttccatccaacgatgattccttaattgagtttgctttcctccatttcttgccaggcagtggtcttttggtcttatttcttggtctcttcttttcatgctcatcagaactgggagagacaggatgttttaggggttttccaagtctctgaaatggagcagcaggtgcatctagcttaggtaaagactctgaatcaagcaatttgattgctgggcggttctgtgcaatctgctttagtgactgagcaactctagcaatgctggaagcttccatggctttttcagtttatcccgcagaatcatcttgtctatgagaaggttcaggtgcttccacacgtttcatacatggtgtgctatttttttgttggttatatcgctttttagtacccaggctatgaaacaaggccagctgttgttatctattgaagcacacccttgtgcaaattctgtccatgatccgggtcaaagagtactggctgttcctgcaagagcaggagcatttgttgttatctgtcgagacacatgcctctgcggtctttttccctggtgtgggtgacgtggtggatcctgttaatgcaggaggcggtgccctgatatttttttttttacactttttgattcaaggaaaaggctatgcatgcaggccttatgatttgttcgtttttatgcccaagtatctcagttaaagctattaccatgcccatgcaggtgtggtattatcatgggtatctagaaatgatcagcttctgctttgcttatgtacgcagccagagaaatgtatgtgcctgcttatagctgctgtttaatacgattgcgattgcaggataccctagtggttagggtgctgcctcttgttgctctcttttatttgtcccattagacctatcatgctcataggtgtttaccatttcccttcaatttgccttgagaataattggtccatgtttacattgtccttcgttcgcttttggtcctgtctaggcgacgaatgattttcgctgttaatgttttagagttattttttttattttgcctagcggtgaaaaaaaattgccttggtatgatgaaaactggatttgttacacgctattgttatggattatgggctattcttttagttcaattatgtcttccgtgtttatcatggcttactctcatgctctttttcctccattcatcagttattgattcttcttttgtgctgtctgtagatcttgtttcttcagataagaatatcattgttgctgcatggtttgtgtgacctgattagtatgttcttcgactcatggtacgttactgatctttttgttataccatattgtgcaggttcttcattcgttacatgatattgccctgttctaagcatggtatacaaggcaaggtgaagcttagaaagtgatatatcgcctttggtgaaatatcgattacgttttagagatctgtttttgttagtggttgcaacgttggttgccctccaaaaacatatacaggggtatagtccaataggtttttttttttcttggggatgcatgtagttaagcctgggatttttaggttgctcatcttccttgcgtgctgatcatgtactggttcagacaggttctggcctgagatggagattgttgaattaagatcagtatggttgtgtttgttaggtcacctttacatggtaggtcatggatatgatatgcggttgcagatctgttctattattgttattgttgccagagataactgcgttcgttgtaccatcgtcaccatagatggctgttcgggtgattgatcaagtccgtacttctttgttctcatcgctgcttggtgctcagtatttggtgcttgtgaggaggttacatttttccatgctttacttccactgcacatgttgatctagcaatacattatagggtatagggatatagttatttcccatatagcgggaattatctaccggttgattggtatttaggtggccatggttgatcagggtatgtgcatatagatcttagagatatgaaaatttcccttggctgaagcatcggctgaatgatttttgttatgaggtgtacaggatttatttggctgttgagggctccatcctactgcgaattaaacggatataatagcatgttttatttaatctagatggacggaaaaacattgtgcatggaccttttaattaagggctacattgggattgctttcttgccgcttgttttagacgccccttcaatgaatcacacaattgttggcctcgttaaatttcgtttcgtgttgttttaatggttctaatctttttcgcttttattttggttctgttcatgttgcaatgctatcagtcgatatgttttcgttatatatgacctgtttatgcctttccctttgcggatattcatgctttcttgtgatttgctgtgcagccattcggtgggatactggattcatgggtctcctggcatggaagaagctag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0387000, RefSeq:Os09g0387000