Os12g0507300

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Revision as of 10:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0507300| Description = Similar to WRKY 10 (Fragment)| Version = NM_001073376.2 GI:297613223 GeneID:4352301| Length = 6848 bp| Definition =...")
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Gene Name

Os12g0507300

Description

Similar to WRKY 10 (Fragment)

Version

NM_001073376.2 GI:297613223 GeneID:4352301

Length

6848 bp

Definition

Oryza sativa Japonica Group Os12g0507300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19618493..19625340

Sequence Coding Region

19618493..19618924,19620153..19620814,19620889..19621029,19622618..19622873,19625296..19625340

Expression

GEO Profiles:Os12g0507300

Genome Context

<gbrowseImage1> name=NC_008405:19618493..19625340 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:19618493..19625340 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccgcgcgccccccgccgccgccgcgcccgaggctcgcgctgccgccgcgctcggccgccgagtcgctcttcacgggcgccggcgacgccagtccgggccccctcaccctcgcctccgcgctcttcccctccgaccccgacggcggcggcggcggcggcggcgtcatgacgtcgtcctcctcctccgccgcgggggccacgagcttcacgcagctgctcatcggcaacctctccgcgcctcctcctcctcctcctcctccgcagcagcagcagcagcgtgaggcggcgcgaggaggcggggtcgcgagggccgggccggcgctgtcggtggcgccgccgccgacggcggggtcggtgttcaccgtgccgcccgggctcagcccctccggccttctcgactcccccgggttgctcttctcgccggccatggggggttttgggatgtcgcatcgggaggctcttgcccaagtcacagcccaagcaagccattctccactcagaatgttcgatcacactgaacaaccatcattctcagcagctccaacatcatctgaagctatgcagcatatgaatgcagcagttaatatgacaggaatttcagacatggtcatgggtccaacaaacaatgagaatgtagcctttcaacctgctgaggcgtctcagaggtatcaagtcaatgcccctgttgataagcctgccgatgatggctataattggcggaagtatggtcagaaggtggtgaaaggcagtgattgcccaagaagctattacaaatgtactcaccccaattgtccggtcaagaaaaaggtagagcatgcagaagatggtcagatatctgagatcatatacaaaggcaaacacaatcaccaacgtccaccaaacaagcgggcaaaagatggcagctcttcagcagctgatcaaaacgagcaatctaatgataccgtgtctggtctgtcaggtattaagagagatcaggaagctatatatggaatgtctgagcaactatctggtttaagtgaaggagatgatatggatgatggtgaatcaaggccacatgaagcagatgacaaagagagcgacagcaagaaaaggaatatacaaatttcttcacagaggacttcagcggaagctaagattattgtgcaaacaaccagtgaggttgatcttttggatgatggttatagatggcgcaagtatgggcagaaggtggttaaaggaaaccctcatccaaggagttactacaagtgcacctatgctggatgtaatgttaggaaacacattgagagggcttcgtcagaccctaaggctgtcataacaacttatgaaggaaaacataaccatgaaccaccggttggtaggggaaacaaccagaatgcgggaaatgcggccccttcaagcagtgcacaacagaatatgcagaatttgtctagtaatcaagcttcacttacaatggcagacttcaacaacattaaccagaggccaattggggatcaaggaaaggagcacttgaaaatggtgggctcaggatcttaa</cdnaseq>

Protein Sequence

<aaseq>MSARPPPPPRPRLALPPRSAAESLFTGAGDASPGPLTLASALFP SDPDGGGGGGGVMTSSSSSAAGATSFTQLLIGNLSAPPPPPPPPQQQQQREAARGGGV ARAGPALSVAPPPTAGSVFTVPPGLSPSGLLDSPGLLFSPAMGGFGMSHREALAQVTA QASHSPLRMFDHTEQPSFSAAPTSSEAMQHMNAAVNMTGISDMVMGPTNNENVAFQPA EASQRYQVNAPVDKPADDGYNWRKYGQKVVKGSDCPRSYYKCTHPNCPVKKKVEHAED GQISEIIYKGKHNHQRPPNKRAKDGSSSAADQNEQSNDTVSGLSGIKRDQEAIYGMSE QLSGLSEGDDMDDGESRPHEADDKESDSKKRNIQISSQRTSAEAKIIVQTTSEVDLLD DGYRWRKYGQKVVKGNPHPRSYYKCTYAGCNVRKHIERASSDPKAVITTYEGKHNHEP PVGRGNNQNAGNAAPSSSAQQNMQNLSSNQASLTMADFNNINQRPIGDQGKEHLKMVG SGS</aaseq>

Gene Sequence

<dnaseqindica>1..432#1661..2322#2397..2537#4126..4381#6804..6848#atgtccgcgcgccccccgccgccgccgcgcccgaggctcgcgctgccgccgcgctcggccgccgagtcgctcttcacgggcgccggcgacgccagtccgggccccctcaccctcgcctccgcgctcttcccctccgaccccgacggcggcggcggcggcggcggcgtcatgacgtcgtcctcctcctccgccgcgggggccacgagcttcacgcagctgctcatcggcaacctctccgcgcctcctcctcctcctcctcctccgcagcagcagcagcagcgtgaggcggcgcgaggaggcggggtcgcgagggccgggccggcgctgtcggtggcgccgccgccgacggcggggtcggtgttcaccgtgccgcccgggctcagcccctccggccttctcgactcccccgggttgctcttctcgccggccatggtaggaactccatttcttgcacttttttttaaaaaaaaattgctgcaaagaggctaaagattttatgtacatgaaagaatggattgagaggttcttgaattgggcgtagttagctttgatggaacgcatataagagtttattacttgttgttcttgttatttttgaagtgcttaattagctatatgagttaattgattgaggggcgttaattagagggaatactttttgatgagatggtaagaacacaaggggctcatgtaaagataaatgctccatttcttgtgtgcgtgcgtgtgtgtgagagctcttaatcaccttgataggtgtcattaattcggttaaggttcctctctttattcatttggtggtgaactggtgatgcgggataaaatctgacgatctgaaagattcatgtattgtaaattaggaatctggaaacgacaattatactttgttttctttcatttcttttttttttcttttaagtttcgcgaacgcaaaatgaaaactatactttcgctgaggtgacaacatctagtgtgctgatgagccccataggtttgccgatttgtccagacaccttgctataattgttgtacggtgctatggcaagtagagaatctctacctacaaggctacaaagagaggtgctgattcttcatttttttaggtattgcaagtggtgatttggcagattgccttgttagtatcaatgattgtaccttctagtgcatgatagtacaattacaagtgggcttgttattttactagcgatgggactactttccagttaaactgtattgttagtttgatgcttttgatgtccttgatatgttcatacctgataagatccttccaaaacgcgctactcggattaaggtagttatagcaatcacccatctactctggagagcaagagcatctctattagaaatagttcattgctccgtgcttactatttattcacaatggctagaggctagagctctaaagccatgtggatgttttgtagttggacatctactttgtaaagacaagtcctgaagtaagttcattggtatgaacaggctacgtaattgattatttcatggtgaaggtcaaatatactgtcacacaacttaattttctcgataaacaatgttcatggctggagcattattctaattttgagcaattaatgcaaatcgaagttttactgatgatgaaacatgtcctttatttgtataggggggttttgggatgtcgcatcgggaggctcttgcccaagtcacagcccaagcaagccattctccactcagaatgttcgatcacactgaacaaccatcattctcagcagctccaacatcatctgaagctatgcagcatatgaatgcagcagttaatatgacaggaatttcagacatggtcatgggtccaacaaacaatgagaatgtagcctttcaacctgctgaggcgtctcagaggtatcaagtcaatgcccctgttgataagcctgccgatgatggctataattggcggaagtatggtcagaaggtggtgaaaggcagtgattgcccaagaagctattacaaatgtactcaccccaattgtccggtcaagaaaaaggtagagcatgcagaagatggtcagatatctgagatcatatacaaaggcaaacacaatcaccaacgtccaccaaacaagcgggcaaaagatggcagctcttcagcagctgatcaaaacgagcaatctaatgataccgtgtctggtctgtcaggtattaagagagatcaggaagctatatatggaatgtctgagcaactatctggtttaagtgaaggagatgatatggatgatggtgaatcaaggccacatgaagcagatgacaaagagagcgacagcaagaaaaggtatttcaggtgtcaatagaaatccactatctcactacattgctgttttcatcatgttttctcttcttgtttaggaatatacaaatttcttcacagaggacttcagcggaagctaagattattgtgcaaacaaccagtgaggttgatcttttggatgatggttatagatggcgcaagtatgggcagaaggtggttaaaggaaaccctcatccaaggtaggttacttttgcaacattctttgtgatttatttatttcaatttcatacatactactgttatacttgtcccccccaagtcccagagttggtgagacactcatatagttgggattttgttgtttgtttgttgatcttaccatgtattcaaagctattatctaggggagaacataagccaacagttacggcacccgttggatcctctctgattcttacattcaataccttgtgatttaattgtggtcttgacattctttttccagttttagtttctcttgcattctttccttttcagaccacatatcttagattatttgttccatcttgcaagtattctcattccatgatgatgcaatattggttatgcatcctggttttgtgtagttgttcaagcattctttcatcatgccttgcatgatttttcttttccacaaatgagtctgataaatagataaaaggatgatccttgcctcttttttgtcggaaaggttcctttctccttttttgtgagattttactgcaggaagatgatggcaacaaacacatgctcaatgtgagcataaagccatgtaaaaaataatgaatagattgtgtattatgtatcaatgatatgcttaaggaaggaaaaaccagtgcacacaatacctatttttcacgctttagccccattttcgttgggtatttcatcacctctttctgttaaatatcataaatcgaatcctctgttattctgaaacatctctctgcatgcaacatccaattcttgtcagataagttggcttgtgcgcagccctcttcacagcgctatgtagctggtggaaaatatttgtatagattatcatatccatgtcaaatgatggaaatggatacatgtgctgtaaatcccacctaacatggtagcaacttgaccagaacagacaaatactatgctttacatgacctgaaactgcagtggtagccatgctcctcaatagattattgtcattctggtcaacactcagactttagatatttaaatgaaacctcagtcaccattagatttcactttaatttaaatcattagattccctcatttatctgagtgtagctattggtatccagattacatgatgttattaccaagttttgtctgctagtcctttgaataaattgtcagatcggtttatgtttggagttattgaaagaatagggaacctagtaaaatatttaaggaaaacgggtagctccagtgagatcctagtgtacgattagggagatactagtagctagacagaatattatttttgcttgatctttaatatcaaatcgggaataacagtttatgagagagaatggccttttccctgcatgacaagacactcactgagtctgtaggtttaatatatgtaatttcatccatactcctaggaaaaagtctacctgcttttattacttcctattgatttcctggaacaattatatttgaacttcttttatctatcaactttgagctattgcattacttaatttattattcaattttacatatggttcagtacaaaaccgtaatgcgagccttttgttttctttcacatttttttctgtaggagttactacaagtgcacctatgctggatgtaatgttaggaaacacattgagagggcttcgtcagaccctaaggctgtcataacaacttatgaaggaaaacataaccatgaaccaccggttggtaggggaaacaaccagaatgcgggaaatgcggccccttcaagcagtgcacaacagaatatgcagaatttgtctagtaatcaagcttcacttacaatggcagacttcaacaacattaaccagaggccaattggggtcttacagttcaaaagcgaagaataacaccgtcaactgactttcttgggaccccggttgctgaagtggcacactggtatttggttgatttcttcaggcaaatattggatgcctgcaattctaatagtcacactgttccaaacgttcaagaagtaatacaacaatatcattgtctgcaattttcctaccgatacacagaattactgaaacgacacctagcctttctagcttgtacatgctgttactttgaagcataaactcaatataacaccagctaggtggatgtgcagatggacgggtcgtaatcatatacatgtttactttgtaatttgtttatcaatcaagctcctgcattgtaataagattgaatagagaagtgaaatgtacagatgctttcccgtatttctgtatatgttgtaatttgtagaagagtaaatcaacaaaagaaggtatactgtggacaatatattaagattctttctcaaactttaatccaaattgcttgtgctaggtatccaagatgcatgttttatcacctgttcatctgcacttttaactttctacctgttttcatctgcatttggttcaatcttactttgtctgacataaagattgatcttttacatggcaagcttaccgtcgttccagcttctgttccatttcttgccatactaatttgcaggtgcttgtactttaccaaatatcagtatgtgaacttcatcttcaaaaaaatcattttgtttctcccttttgcttttgatagtacatggtaatttcagcctcggtatctatctagctacatgtgcttcatacatacagaatctgtagctgttcagagcaactattgagctttctgaccccaccattatatgaggtacagtaccttttcctcaactttggcacttctgtttgtttctatcccaaaggcaaaagtctatgtattacttttaataatctatgtagcttagcatgctgctgttttgatctccaggtgagcattatcaactgtaagttttttcaggcacatcactgtcaagatcagccagaatgtccttatctaatactgctgcatctactcagaatctcatgtactatttggttagttgatcttgagccttttggaagaagaaacataaggccttaccctccatgaatggtttaagaacgaaaaatttgagaatgacacttgatcctatagtaatccgtgtctttacttattttattaagcataggtatatgctttcttagccatacttgaagctgaagtttctttggttaaatgattcttctctcctagcatgataacatcaccaaagtatgattcatgcatagcatcatcgaatcttgaactattttttcttcttttttttttctttttttttctgttggaaaccagactatgatctcatctcactgcaagtaaatcacattatgccttgtgcctaccagtatcatatccctttttatagaaggtatgacaatttgtaatgatattctatctctttagaatcccacttgaaatggaaactgggttgcacacccatctggtagctggaattattatctttataaaccaaataattagtaaacttgttttcttaagagttagaatgttgcccactaccagtcgagtatcccccttaacttcatccgacgaactcttcccctcccaccgaccaccgtaccctgcttcaacttcaactccgataacctaattcaggtacctcgctagagaatacaccaccaccataactgtgttttgttgccatcaccgtcaccatcagctcattggattgatcaacacaactggacactcgattgagatccaatggttgggatcaggtcacgaagtttaagaaaatctcagccacatgatgtatcgtaaaaaggccaaaaattcaactaaaatacccttctgtatttatccccatgttagtataacatattacaactgaagtgaaaagacagttactactacagtgaacaaaaccaccccccctttgtagctttctcccatttggtaaccccaaaagcttagtttctttatgatgccctaacttttggtgcacccatttattatgtaataacctagtccccaggtccatcctttttgtgcttcaatggtacaatggtactactacctaaagtccatgtctctactgatacaaagttctttcaggcattatgacagtgggtatctgcatgagacaagtggtagtaaccatatttcccagatctgaaagaatggattggattggaggcagaaaagtttaccaaaaggcttgtagaaaaaatcattggaaattttacaggtcagtcaccactagggcttctggccaggctggtgtgtggtgagtggtgacctctgcaaggtgatgcagaaatgtgtagcatgcaatgcctattggccttgttgctttaggatcaaggaaaggagcacttgaaaatggtgggctcaggatcttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0507300, RefSeq:Os12g0507300