BGIOSGA013897
| Gene Name |
BGIOSGA013897 |
|---|---|
| Description |
cDNA clone:J023086F23, full insert sequence |
| Definition |
Oryza sativa Indica Group BGIOSGA013897, complete gene. |
| LocusTag |
' |
| Ensembl Transcript ID |
BGIOSGA013897-TA |
| Ensembl Protein ID |
BGIOSGA013897-PA |
| Length |
4766 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:39539680..39544445 |
| Sequence Coding Region |
39539680..39539760,39539857..39540052,39540138..39540346,39540439..39540541,39540624..39540798 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome03:39539680..39544445 source=RiceIndica03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome03:39539680..39544445 source=RiceIndica03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGAGGCCAGCGCCGGGCTGGTCGCCGGCTCCCACAACCGGAACGAGCTCGTCGTCATCCGCCGCGACGGGGAGCCCGGGCCGAAGCCGGTGAAGCATACGAATGGGCAGGTGTGCCAGATTTGCGGCGACGACGTCGGCCTCACCCCCGACGGCGAGCCCTTCGTCGCCTGCAACGAGTGCGCCTTCCCCGTCTGCCGCGACTGCTACGAGTACGAGCGCCGCGAGGGCACGCAGAACTGCCCCCAGTGCAAGACCCGCTTCAAACGCCTCAAGGGTTGCGCCCGCGTCCCCGGCGATGAGGAGGAGGAGGACGTCGACGACCTGGAGAACGAGTTCAACTGGAGGGACAAGACCGACTCGCAGTATGTCGCCGAGTCCATGCTCCACGGCCACATGAGCTATGGCCGCGGCGGTGACCTCGACGGCGTGCCGCAGCATTTCCAGCCAATCCCCAATGTTCCCCTCCTCACCAACGGGGAGATGGCTGATGACATCCCGCCGGAGCAGCACGCCCTTGTGCCGTCTTTCATGGGCGGCGGAGGAAAGAGGATCCACCCTCTTCCTTATGCGGATCCAAACCTTCCTGTGCAACCAAGATCCATGGACCCGTCCAAGGATCTCGCCGCGTATGGGTATGGGAGTGTCGCGTGGAAAGAAAGAATGGAAAGCTGGAAGCAGAAGCAGGAGAGGTTACACCAGATGAGGAATGATGGCGGTGGTAAAGATTGGGACGGCGATGGCGATGATGCAGATCTACCACTAATGGATGAAGCTAGACAGCCATTGTCCAGAAAGATTCCGATTTCTTCAAGCCTGGTCAATCCTTATAGGATGATTATCATAATTCGGCTGGTGGTTCTGGGCTTCTTCTTCCACTATCGAGTGATGCATCCAGTGCCTGATGCATTTGCATTATGGCTCATATCCGTCATCTGTGAAATCTGGTTCGCCATGTCTTGGATTCTTGATCAGTTCCCAAAGTGGTTTCCTATTGAGAGGGAAACTTACCTTGACCGGTTGACATTGAGGTTTGACAAGGAAGGCCAGCAATCTCAACTCGCCCCAGTTGATTTTTTTGTCAGTACGGTTGATCCCATGAAGGAGCCTCCCTTGGTCACAGCAAATACTGTTCTGTCTATCCTTGCGGTAGATTATCCGGTCGACAAGGTCTCTTGCTATGTTTCTGATGATGGGGCTGCCATGCTGACATTTGAAGCACTGTCTGAAACATCTGAATTTGCAAAGAAGTGGGTTCCTTTCTGCAAAAGGTACAGTCTCGAGCCTCGTGCCCCAGAATGGTACTTCCAACAGAAGATAGACTACCTGAAAGATAAGGTGGCACCAAACTTTGTCAGGGAGAGGAGAGCAATGAAGAGGGAATATGAGGAATTCAAGGTCAGAATCAATGCATTGGTTGCTAAAGCCCAGAAAGTTCCTGAGGAAGGATGGACAATGCAGGATGGAACTCCCTGGCCTGGAAACAACGTTCGTGATCATCCTGGAATGATTCAGGTCTTCCTTGGCCAAAGTGGTGGCCATGATGTGGAAGGAAATGAACTGCCTCGATTGGTTTATGTTTCAAGAGAAAAACGGCCAGGCTATAACCATCATAAGAAGGCTGGTGCTATGAACGCATTGGTCCGAGTCTCCGCTGTACTAACTAATGCTCCATATATGTTGAACTTGGATTGTGATCACTACATCAACAACAGCAAGGCTATAAAGGAAGCAATGTGTTTTATGATGGATCCCTTGGTAGGAAAGAAAGTTTGTTATGTGCAGTTCCCACAAAGATTCGATGGCATTGACCGTCATGATCGATATGCTAATAGGAATGTCGTCTTTTTCGATATCAACATGAAAGGTTTGGATGGTATTCAAGGCCCCATCTATGTCGGTACTGGATGTGTCTTTAGAAGACAGGCGCTGTATGGTTATGATGCCCCCAAATCAAAGAAACCACCATCAAGGACTTGCAACTGCTGGCCAAAGTGGTGCATTTGCTGTTGCTGCTTTGGTAACAGGACAAACAAGAAGAAGACTGCTAAACCTAAAACAGAGAAGAAAAAGAGGTTGTTTTTCAAGAGAGCAGAGAATCAGTCGCCTGCATATGCTCTTGGTGAGATTGACGAAGGTGCTCCAGGAGCTGAAAATGAAAAGGCTGGTATTGTAAATCAACAGAAGTTAGAAAAGAAATTTGGTCAATCTTCCGTTTTTGTTGCGTCCACACTTCTTGAGAATGGTGGAACCCTGAAGAGTGCAAGCCCAGCATCACTCTTAAAGGAAGCTATACATGTCATCAGTTGTGGTTACGAGGACAAGACAGACTGGGGAAAAGAGATTGGCTGGATCTACGGATCCGTTACAGAGGATATTCTTACTGGGTTTAAGATGCACTGCCATGGTTGGCGGTCGATTTACTGCATACCTAAGCGGGCTGCATTCAAAGGTTCTGCACCTCTCAATCTTTCTGACCGTCTTCACCAGGTTCTTCGGTGGGCGCTTGGATCTATTGAAATTTTCTTCAGCAACCATTGCCCTCTTTGGTATGGCTATGGAGGTGGATTGAAATGTTTGGAAAGATTTTCCTACATTAATTCCATCGTGTATCCTTGGACATCCATTCCACTATTGGCTTACTGTACATTGCCTGCCATCTGTTTGCTGACAGGAAAATTTATCACTCCAGAGCTTACTAATATCGCCAGCCTTTGGTTCATGTCACTATTTATCTGCATTTTTGCTACGGGCATTCTGGAAATGAGATGGAGTGGTGTAGGCATCGATGATTGGTGGAGGAACGAGCAGTTTTGGGTCATTGGAGGTGTCTCTTCACATCTCTTTGCTGTGTTCCAAGGACTTCTCAAGGTCATAGCTGGTATCGATACAAGCTTCACTGTGACATCAAAGGGTGGAGATGATGAAGAGTTCTCAGAGCTGTATACCTTCAAATGGACAACCTTGTTAATACCCCCTACCACTTTGCTCCTATTGAACTTCATCGGGGTAGTGGCTGGCGTTTCCAACGCAATCAATAACGGATATGAATCATGGGGGCCGCTCTTTGGGAAGCTGTTCTTTGCATTTTGGGTGATTGTCCATCTGTATCCGTTCTTGAAGGGTTTGGTTGGAAGGCAAAACAGGACACCAACAATTGTCATTGTCTGGTCCATTCTGCTGGCTTCAATCTTCTCGCTCCTCTGGGTCCGGATTGATCCTTTCCTGGCAAAGAATGACGGCCCTCTTCTGGAGGAGTGTGGTTTGGATTGCAACTAG</cdnaseq> |
| Protein Sequence |
<aaseq>MEASAGLVAGSHNRNELVVIRRDGEPGPKPVKHTNGQVCQICGDDVGLTPDGEPFVACNECAFPVCRDCYEYERREGTQNCPQCKTRFKRLKGCARVPGDEEEEDVDDLENEFNWRDKTDSQYVAESMLHGHMSYGRGGDLDGVPQHFQPIPNVPLLTNGEMADDIPPEQHALVPSFMGGGGKRIHPLPYADPNLPVQPRSMDPSKDLAAYGYGSVAWKERMESWKQKQERLHQMRNDGGGKDWDGDGDDADLPLMDEARQPLSRKIPISSSLVNPYRMIIIIRLVVLGFFFHYRVMHPVPDAFALWLISVICEIWFAMSWILDQFPKWFPIERETYLDRLTLRFDKEGQQSQLAPVDFFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKRYSLEPRAPEWYFQQKIDYLKDKVAPNFVRERRAMKREYEEFKVRINALVAKAQKVPEEGWTMQDGTPWPGNNVRDHPGMIQVFLGQSGGHDVEGNELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPYMLNLDCDHYINNSKAIKEAMCFMMDPLVGKKVCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPKSKKPPSRTCNCWPKWCICCCCFGNRTNKKKTAKPKTEKKKRLFFKRAENQSPAYALGEIDEGAPGAENEKAGIVNQQKLEKKFGQSSVFVASTLLENGGTLKSASPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSIYCIPKRAAFKGSAPLNLSDRLHQVLRWALGSIEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPWTSIPLLAYCTLPAICLLTGKFITPELTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVIAGIDTSFTVTSKGGDDEEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKNDGPLLEECGLDCN</aaseq> |
| Gene Sequence |
<dnaseqindica>1..81#178..373#459..667#760..862#945..1119#1509..1775#1858..2203#2288..2425#2537..2662#2758..2970#3063..3354#3451..3647#3736..4086#4182..4766#ATGGAGGCCAGCGCCGGGCTGGTCGCCGGCTCCCACAACCGGAACGAGCTCGTCGTCATCCGCCGCGACGGGGAGCCCGGGGTACGCGCGCGGCGCTACTGATTTCCGGTGTCTCGCTCTGCTTGGTTGCCTACTTGCTGCTGATTTTTTTGTTCCTCTCTCTGTGTGTTTGTGCAGCCGAAGCCGGTGAAGCATACGAATGGGCAGGTGTGCCAGATTTGCGGCGACGACGTCGGCCTCACCCCCGACGGCGAGCCCTTCGTCGCCTGCAACGAGTGCGCCTTCCCCGTCTGCCGCGACTGCTACGAGTACGAGCGCCGCGAGGGCACGCAGAACTGCCCCCAGTGCAAGACCCGCTTCAAACGCCTCAAGGGTAACCTCGCCGCCCGCAATGCCCGCCGGATTTACCGCCCTCCGTCGGTTGCTCACGCCTCCCCCCGGTGGTTCTGGTTTCTCAGGTTGCGCCCGCGTCCCCGGCGATGAGGAGGAGGAGGACGTCGACGACCTGGAGAACGAGTTCAACTGGAGGGACAAGACCGACTCGCAGTATGTCGCCGAGTCCATGCTCCACGGCCACATGAGCTATGGCCGCGGCGGTGACCTCGACGGCGTGCCGCAGCATTTCCAGCCAATCCCCAATGTTCCCCTCCTCACCAACGGGGAGATGGTACCTGCCAAATCTCACGCTGTTTTTTTGCATTGCGGTTGTCTCAGCTTTCAATTGGGGTTCTCAATTTGGTTGTTCTGATGTGCCTGTAGGCTGATGACATCCCGCCGGAGCAGCACGCCCTTGTGCCGTCTTTCATGGGCGGCGGAGGAAAGAGGATCCACCCTCTTCCTTATGCGGATCCAAACCTTCCTGGTTTGTATTTGGATCATCGCAAGGCTAGCTTCTAGTTGTATTTTGGTGCTTCGGATTGACTCAATTGGTGGCTGTTGTGCAGTGCAACCAAGATCCATGGACCCGTCCAAGGATCTCGCCGCGTATGGGTATGGGAGTGTCGCGTGGAAAGAAAGAATGGAAAGCTGGAAGCAGAAGCAGGAGAGGTTACACCAGATGAGGAATGATGGCGGTGGTAAAGATTGGGACGGCGATGGCGATGATGCAGATCTACCACTGTATGACACTGGAAACTCGTTTGACTTTTAATTTGTTTGGTGCTTCTCTGATAGGCTATTTTTGGTGTCCTTGCATTGGTCAAACCTTAAATTGGGCATGATTATGACCGAATAACGACAGAAAATCCAATAAACTGTGTCAGTGTGATAGAATTTGGAATCATACTGGCTGCTTCAAATTAGTCACATAGTTCAACCATCATGTATGTTTTGCTGGATGAAGGGAATCTCATCATCAGCCATTTTAGTATGTGGCCTAGAAAATTTGTGGTGGTTGCTACTGCTAGTAATAATTTCTATCCGGTATTTCCTTAAGTAGACATGTGTTGCCCTGTTGCTATATGTGTTTAGAGACTCAACCATCGATTCTTTCTTGATTCTTTTAACAGAATGGATGAAGCTAGACAGCCATTGTCCAGAAAGATTCCGATTTCTTCAAGCCTGGTCAATCCTTATAGGATGATTATCATAATTCGGCTGGTGGTTCTGGGCTTCTTCTTCCACTATCGAGTGATGCATCCAGTGCCTGATGCATTTGCATTATGGCTCATATCCGTCATCTGTGAAATCTGGTTCGCCATGTCTTGGATTCTTGATCAGTTCCCAAAGTGGTTTCCTATTGAGAGGGAAACTTACCTTGACCGGTTGACATTGAGGTTTGTTACTCTTGCCACCTTGTATCACTTGCCTTCTATTCTTTCCGACGTTCTGTGACTTACTATTATTTTTCCTGGATAGGTTTGACAAGGAAGGCCAGCAATCTCAACTCGCCCCAGTTGATTTTTTTGTCAGTACGGTTGATCCCATGAAGGAGCCTCCCTTGGTCACAGCAAATACTGTTCTGTCTATCCTTGCGGTAGATTATCCGGTCGACAAGGTCTCTTGCTATGTTTCTGATGATGGGGCTGCCATGCTGACATTTGAAGCACTGTCTGAAACATCTGAATTTGCAAAGAAGTGGGTTCCTTTCTGCAAAAGGTACAGTCTCGAGCCTCGTGCCCCAGAATGGTACTTCCAACAGAAGATAGACTACCTGAAAGATAAGGTGGCACCAAACTTTGTCAGGGAGAGGAGAGCAATGAAGGTACATTGCATTTCTGTTGTGTTTTGCTATGATATGTAGCTCATAAAATTAATGCTAATTTTGACCTCAATTCCTTTCTCTCAGAGGGAATATGAGGAATTCAAGGTCAGAATCAATGCATTGGTTGCTAAAGCCCAGAAAGTTCCTGAGGAAGGATGGACAATGCAGGATGGAACTCCCTGGCCTGGAAACAACGTTCGTGATCATCCTGGAATGATTCAGGTATGCTTTTACAGTTCATGGTGCTGTTTAATTATCTGCTGACATGATGTGATGGCTACTTTCCCCTTCTCTTGCTTTACCATGACAAATCTCAAACTTTTGCAACCATAGGTCTTCCTTGGCCAAAGTGGTGGCCATGATGTGGAAGGAAATGAACTGCCTCGATTGGTTTATGTTTCAAGAGAAAAACGGCCAGGCTATAACCATCATAAGAAGGCTGGTGCTATGAACGCATTGGTAAAGACAACACGTTCAAGGCATTTGTCAGTCTTCTATAGCCTGTAGCAGCATCCAGTGGATATTGATGTCCTTTCTGTTTGTCTGTTTTTCAGGTCCGAGTCTCCGCTGTACTAACTAATGCTCCATATATGTTGAACTTGGATTGTGATCACTACATCAACAACAGCAAGGCTATAAAGGAAGCAATGTGTTTTATGATGGATCCCTTGGTAGGAAAGAAAGTTTGTTATGTGCAGTTCCCACAAAGATTCGATGGCATTGACCGTCATGATCGATATGCTAATAGGAATGTCGTCTTTTTCGATGTAAGATTTATCTCCAATATTTCTGATTCTGTTCATCGTGTATGTTGAGCCATCAAACTTGATGCTGTTTCCCTATTATTTATTTCTTGCAGATCAACATGAAAGGTTTGGATGGTATTCAAGGCCCCATCTATGTCGGTACTGGATGTGTCTTTAGAAGACAGGCGCTGTATGGTTATGATGCCCCCAAATCAAAGAAACCACCATCAAGGACTTGCAACTGCTGGCCAAAGTGGTGCATTTGCTGTTGCTGCTTTGGTAACAGGACAAACAAGAAGAAGACTGCTAAACCTAAAACAGAGAAGAAAAAGAGGTTGTTTTTCAAGAGAGCAGAGAATCAGTCGCCTGCATATGCTCTTGGTGAGATTGACGAAGGTGCTCCAGGTATCACTTTAACTTCCAAGAAAACCCTGTCGTTATTCTAGATGCTTCCTCATCTTCATTGTATTAGCACACCTAATCTTGGAATGGTTTCTGCAGGAGCTGAAAATGAAAAGGCTGGTATTGTAAATCAACAGAAGTTAGAAAAGAAATTTGGTCAATCTTCCGTTTTTGTTGCGTCCACACTTCTTGAGAATGGTGGAACCCTGAAGAGTGCAAGCCCAGCATCACTCTTAAAGGAAGCTATACATGTCATCAGTTGTGGTTACGAGGACAAGACAGACTGGGGAAAAGAGGTAAAATTTGGAGCATGGTTGTGTGTTAGTTGGCAGGTCGAATATCTTCCGTTACCTTGTAAACCATAACTTCTTTGTCTTTTTGTAGATTGGCTGGATCTACGGATCCGTTACAGAGGATATTCTTACTGGGTTTAAGATGCACTGCCATGGTTGGCGGTCGATTTACTGCATACCTAAGCGGGCTGCATTCAAAGGTTCTGCACCTCTCAATCTTTCTGACCGTCTTCACCAGGTTCTTCGGTGGGCGCTTGGATCTATTGAAATTTTCTTCAGCAACCATTGCCCTCTTTGGTATGGCTATGGAGGTGGATTGAAATGTTTGGAAAGATTTTCCTACATTAATTCCATCGTGTATCCTTGGACATCCATTCCACTATTGGCTTACTGTACATTGCCTGCCATCTGTTTGCTGACAGGAAAATTTATCACTCCAGAGGTAACGCTTATTCTGCTCGTAATTCTGTGTGGTGTGAAATTGTAGAAGACCAATGACCTGAACCTTACTTTTCCTCCTTTTGTTCCATTCTGCAGCTTACTAATATCGCCAGCCTTTGGTTCATGTCACTATTTATCTGCATTTTTGCTACGGGCATTCTGGAAATGAGATGGAGTGGTGTAGGCATCGATGATTGGTGGAGGAACGAGCAGTTTTGGGTCATTGGAGGTGTCTCTTCACATCTCTTTGCTGTGTTCCAAGGACTTCTCAAGGTCATAGCTGGTATCGATACAAGCTTCACTGTGACATCAAAGGGTGGAGATGATGAAGAGTTCTCAGAGCTGTATACCTTCAAATGGACAACCTTGTTAATACCCCCTACCACTTTGCTCCTATTGAACTTCATCGGGGTAGTGGCTGGCGTTTCCAACGCAATCAATAACGGATATGAATCATGGGGGCCGCTCTTTGGGAAGCTGTTCTTTGCATTTTGGGTGATTGTCCATCTGTATCCGTTCTTGAAGGGTTTGGTTGGAAGGCAAAACAGGACACCAACAATTGTCATTGTCTGGTCCATTCTGCTGGCTTCAATCTTCTCGCTCCTCTGGGTCCGGATTGATCCTTTCCTGGCAAAGAATGACGGCCCTCTTCTGGAGGAGTGTGGTTTGGATTGCAACTAG</dnaseqindica> |
| External Link(s) |
