BGIOSGA013919

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Revision as of 10:09, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013919| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013919, complete gene.| tag = OsI_142...")
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Gene Name

BGIOSGA013919

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013919, complete gene.

LocusTag

OsI_14282

Ensembl Transcript ID

BGIOSGA013919-TA

Ensembl Protein ID

BGIOSGA013919-PA

Length

6445

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:39834033..39840477

Sequence Coding Region

39834033..39834458,39834542..39834613,39834680..39835294,39835628..39835810,39835979..39836038
,39836108..39836311,39836872..39837120,39837984..39838082,39838135..39838233
,39838838..39838855,39839043..39839237,39839356..39839448,39839640..39839906
,39840259..39840477

Genome Context

<gbrowseImage1> name=IndicaChromosome03:39834033..39840477 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:39834033..39840477 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCCCTGGACCCCGACTCCTCGCCGGCGCCGCCGCACCGGGACTGGTTCTTCCCGCCGGCGCCGCCCTTCCTCCCGTCCTCCAGAGCCCGAACGCCGAGGGCCCCCTTCCCCTCCACCTCCCGCTCCTCCAATCCATACTCCTTCCCGGACCGCCGGCCGCCTCCTACCCCGCGCTCCCGCTCCCGCTCCCCCCTCCCGCCGCCGGAGCAGCAGAAGCAGCAGCAGCCGCCCCCGACGACGCCTCCTCCCGCCCCGCGCCGTCGCGACCCCCGGTATGCTGGCGTCCGCCGTGGCGATGTCCGAACGCTCACCGCCGAGAAAGCGGCGGCGGCGGCGGCGGTTCCTACGGCCGCGCAGGTGCACGGGAGCAAGTCAGCGGCGTCGGCGACCACCCTCCGATGGTCAGGGATGGTATCCGTGGCGGCTATTGTGCTCTGCTTCTCTTCCCTTGTCCGCAGTAACTCCTCGCTACATGATCAGGTCCACCATTTGAAGGCTCAGCTTGCGGAAGCTACTACAAAATTGCAGTCTTGTATTACAGAGTCCTCGATGGATATGAGTAGCATATTATCATATCAGAGCAATAACAGTACTTCGCAGAACAGAGGTCTTAAGAATTTCTCATTGCTGCTCTCGCTTTCTACACTGTACGCCCCATTACTCATTCTTAAGTACATGGACCTTTTCTTAAAGCTGAGGAGTTCGCAAGACTCCGAAGAAGAAGTTCCCATAAACAAGCGGTTGGCATACCGAGTTGATATATTTTTATCACTTCAACCATATGCTAAACCCTTGGTTCTACTTGTTGCTACATTGTTACTTATTGGTCTTGGTGGCCTGGCTCTTTATGGTGTAAATGATGATAGCCTTTTAGATTGCCTCTGGCTGTCCTGGACCTTTGTTGCTGATTCGGGCAACCATGCAAACGCAGAAGGCTTTGGACCAAAGTTAGTTTCAGTTTCAATTAGTATCGGTGGGATGCTGGTTTTTGCCATGATGCTTGGGCTTGTAACAGATTCGATCTCTGAGAAGTTTGATTCACTGAGGAAAGGAAGAAGTGAGGTCATAGAGCAAAGCCACACGCTGGTCCTTGGGTGGAGTGACAAACTGGGATCATTGCTGAACCAAATTGCTATTGCTAATGAAAGTTTGGGAGGAGGAACCATTGTAGTGATGGCTGAGAAAGACAAAGAGGAAATGGAAGCAGACATTGCTAAAATGGAGTTTGACTTGAAAGGAACAGCTATAATTTGTAGAAGTGGAAGCCCTCTGATTCTAGCTGACTTGAAAAAGGTCTCAGTTTCTAAAGCGCGTGCAATTGTGGTTTTAGCTGAAGAAGGAAATGCTGACCAGAGTGACGCACGCGCATTGCGAACAGTCTTGAGTTTAACTGGGGTCAAAGAAGGGCTAAGAGGTCACATAGTTGTTGAGCTTAGCGACCTTGACAATGAGGTTCTAGTCAAACTTGTTGGTGGAGACCTTGTGGAAACTGTTGTTGCACATGATGTGATAGGTCGTTTGATGATACAATGTGCACGTCAGCCAGGCCTTGCTCAGATATGGGAAGATATCCTTGGCTTCGAAAACTGTGAGTTCTATATTAAAAGATGGCCTCAGTTGGATGGTATGCAATTTGAAGATGTGCTCATTAGCTTTCCTGATGCCATTCCATGTGGCATAAAGGTGGCATCTTATGGTGGCAAGATTATTTTAAATCCGGATGACTTTTATGTCTTGCAAGAGGGTGATGAGGTGCTAGTAATTGCAGAAGATGATGACACATATGCCCCAGCGCCATTACCCAAGGTTAAAGAAGCTGTTTACATAGACATTGTTCACCCCGAAAGAAATCCTCAGAAGATTCTTCTTTGTGGATGGCGACGGGATATAGATGATATGATTGTGGTTATGAGAGGTTACCTACCTAAAGATTTTGTTGTTCCCAAGTCTCCTGAAAGAATATTGTTTTGTGGTTGGCGGCGTGATATGGAAGATATGATAATGGCCTGTCCATTTGAAAATGTACTCGATGCTTTTCTAGCGCCAGGGTCAGAGTTGTGGATGTTCAATGACGTTCCTGAGATGGACAGAGAAAGAAAGCTGATAGACGGAGGCCTGGACTTCAGTCGTCTAGAAAATATTACTTTGGTTCACCGTGAAGGAAATGCTGTTATTCGCCGTCACTTGGAGAGCCTCCCTTTAGAATCATTTGATTCTATACTGATTCTGGCAGATGAATCTGTTGAGGATTCAGCAATCCAAGCTGATTCAAGGTCGCTTGCAACACTACTGCTGATCAGGGATATCCAGGCAAAGCGACTTCCATTCAGGGAGGCGATGGTTTCACATGTTACTCGAGGAAGCTTCTGTGAAGGTTCTTGGATTGGGGAGATGCAACAAGCATCTGATAAATCTGTCATAATCAGTGAGATTCTGGATCCTAGGACAAAAAATTTATTGTCAGTGTCAAAAATCAGTGACTATGTTCTATCAAATGAACTAGTGAGCATGGCATTGGCAATGGTTGCTGAAGATAGACAAATAAATGATGTCTTGGAGGAGCTATTTGCGGAGCAGGGGAACGAGATGCAAATACGACCAGCTGATCTCTACCTTCGAGAAGATGAGGAGTTAAATTTCTTTGAGGTCATGCTACGTGGTAGGCAGAGAAAAGAGATTGTCATTGGCTACCGTCTTGTGGATGCTGAACGCGCCATAATCAATCCACCAGACAAAGTTTCAAGGCGGAGATGGTCGGCCAAAGATGTTTTTGTTGTAATTACCGAGAAAGAATGA</cdnaseq>

Protein Sequence

<aaseq>MPLDPDSSPAPPHRDWFFPPAPPFLPSSRARTPRAPFPSTSRSSNPYSFPDRRPPPTPRSRSRSPLPPPEQQKQQQPPPTTPPPAPRRRDPRYAGVRRGDVRTLTAEKAAAAAAVPTAAQVHGSKSAASATTLRWSGMVSVAAIVLCFSSLVRSNSSLHDQVHHLKAQLAEATTKLQSCITESSMDMSSILSYQSNNSTSQNRGLKNFSLLLSLSTLYAPLLILKYMDLFLKLRSSQDSEEEVPINKRLAYRVDIFLSLQPYAKPLVLLVATLLLIGLGGLALYGVNDDSLLDCLWLSWTFVADSGNHANAEGFGPKLVSVSISIGGMLVFAMMLGLVTDSISEKFDSLRKGRSEVIEQSHTLVLGWSDKLGSLLNQIAIANESLGGGTIVVMAEKDKEEMEADIAKMEFDLKGTAIICRSGSPLILADLKKVSVSKARAIVVLAEEGNADQSDARALRTVLSLTGVKEGLRGHIVVELSDLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFENCEFYIKRWPQLDGMQFEDVLISFPDAIPCGIKVASYGGKIILNPDDFYVLQEGDEVLVIAEDDDTYAPAPLPKVKEAVYIDIVHPERNPQKILLCGWRRDIDDMIVVMRGYLPKDFVVPKSPERILFCGWRRDMEDMIMACPFENVLDAFLAPGSELWMFNDVPEMDRERKLIDGGLDFSRLENITLVHREGNAVIRRHLESLPLESFDSILILADESVEDSAIQADSRSLATLLLIRDIQAKRLPFREAMVSHVTRGSFCEGSWIGEMQQASDKSVIISEILDPRTKNLLSVSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEQGNEMQIRPADLYLREDEELNFFEVMLRGRQRKEIVIGYRLVDAERAIINPPDKVSRRRWSAKDVFVVITEKE</aaseq>

Gene Sequence

<dnaseqindica>1..426#510..581#648..1262#1596..1778#1947..2006#2076..2279#2840..3088#3952..4050#4103..4201#4806..4823#5011..5205#5324..5416#5608..5874#6227..6445#ATGCCCCTGGACCCCGACTCCTCGCCGGCGCCGCCGCACCGGGACTGGTTCTTCCCGCCGGCGCCGCCCTTCCTCCCGTCCTCCAGAGCCCGAACGCCGAGGGCCCCCTTCCCCTCCACCTCCCGCTCCTCCAATCCATACTCCTTCCCGGACCGCCGGCCGCCTCCTACCCCGCGCTCCCGCTCCCGCTCCCCCCTCCCGCCGCCGGAGCAGCAGAAGCAGCAGCAGCCGCCCCCGACGACGCCTCCTCCCGCCCCGCGCCGTCGCGACCCCCGGTATGCTGGCGTCCGCCGTGGCGATGTCCGAACGCTCACCGCCGAGAAAGCGGCGGCGGCGGCGGCGGTTCCTACGGCCGCGCAGGTGCACGGGAGCAAGTCAGCGGCGTCGGCGACCACCCTCCGATGGTCAGGGATGGTATCCGTGGCGGTAAGAAATGGGTGAGCTCGCGGGGTTTTCGCGTTTGACTTTTGTTGACTGACGGTTTAACCGCGTAAACCTGATGCTTGCAGGCTATTGTGCTCTGCTTCTCTTCCCTTGTCCGCAGTAACTCCTCGCTACATGATCAGGTCCACCATTTGAAGGTAAAATTCCAACTGATTCCAATGCACATTCTGCATAACTGCGCACTTATACGCGGATTCTATCAGGCTCAGCTTGCGGAAGCTACTACAAAATTGCAGTCTTGTATTACAGAGTCCTCGATGGATATGAGTAGCATATTATCATATCAGAGCAATAACAGTACTTCGCAGAACAGAGGTCTTAAGAATTTCTCATTGCTGCTCTCGCTTTCTACACTGTACGCCCCATTACTCATTCTTAAGTACATGGACCTTTTCTTAAAGCTGAGGAGTTCGCAAGACTCCGAAGAAGAAGTTCCCATAAACAAGCGGTTGGCATACCGAGTTGATATATTTTTATCACTTCAACCATATGCTAAACCCTTGGTTCTACTTGTTGCTACATTGTTACTTATTGGTCTTGGTGGCCTGGCTCTTTATGGTGTAAATGATGATAGCCTTTTAGATTGCCTCTGGCTGTCCTGGACCTTTGTTGCTGATTCGGGCAACCATGCAAACGCAGAAGGCTTTGGACCAAAGTTAGTTTCAGTTTCAATTAGTATCGGTGGGATGCTGGTTTTTGCCATGATGCTTGGGCTTGTAACAGATTCGATCTCTGAGAAGTTTGATTCACTGAGGAAAGGAAGAAGTGAGGTCATAGAGCAAAGCCACACGCTGGTCCTTGGGTGGAGTGACAAACTGGTAATCCTGCATTCAATCCTGCTAATCTTTATCGCAAAATTCCATATTTCTACCTACCTGTCCTGTTATGTTCCTTGTTGTTTGGGAATGATGTTATACCAATAGCTATTAAATATAGCTCTAACTAGGGACGTCATTGCAACTGTTACATTGCTTTTTATTGCATAGCAGTCTCGCTACAAAAGTAAAGTAGTTAGTGAATTCTGGTATTTAGTTTAAATATGCAAATTTCTTATATATCTGTTTCTGCAGATCAACTGATCTGAGCACAAGCTGTTCCTCTCCAGATTACTGTAGTCTAAGTGTCTAACCTATTTCCTTTTGTGGCAACAGGGATCATTGCTGAACCAAATTGCTATTGCTAATGAAAGTTTGGGAGGAGGAACCATTGTAGTGATGGCTGAGAAAGACAAAGAGGAAATGGAAGCAGACATTGCTAAAATGGAGTTTGACTTGAAAGGAACAGCTATAATTTGTAGAAGTGGAAGCCCTCTGATTCTAGCTGACTTGAAAAAGGTAAACATTGTGATGTAGTGATTCTGCTAACCCGCATTATGATCTGTTGGCACTTGGCAGTAATCAATAGACAATTGGATGGTTGTTATGTTAATTTAATGACTCACTATTACTTTACTAAATCTATATGCAACTCTTTGTTGAACTGAATCTGCCTTCATGTACAAGGTCTCAGTTTCTAAAGCGCGTGCAATTGTGGTTTTAGCTGAAGAAGGAAATGCTGACCAGGTACATTGTGCTAGTTAATTTGTATTATTATACATGACGCTTTAGCTTACACCATTGCCTCTTTTCTAGAGTGACGCACGCGCATTGCGAACAGTCTTGAGTTTAACTGGGGTCAAAGAAGGGCTAAGAGGTCACATAGTTGTTGAGCTTAGCGACCTTGACAATGAGGTTCTAGTCAAACTTGTTGGTGGAGACCTTGTGGAAACTGTTGTTGCACATGATGTGATAGGTCGTTTGATGATACAATGTGCACGTCAGCCAGGCCTTGCTCAGGTTTCTTTCTAATCAACAGTAATTTCTGAATAAAGTTATTTTTTGATGACACAAGTTCTTTCTGGATAATAGATACTTCTTCAAGGGAAACTCATACTGAACATCCTGATTTGATTCCACTTATTGTCTGTATTATGGAATCTCATGTCATGTGCATCCAGAAAACCTATTTTAGTACAAAGTCTGATTACTTTTTGAAACTTTTTACACACTTGTATTTTTCGCTTGATTGTGGATGTAAATATGCTACTATGTTGACCACTTGACCCAATTTAAATCACTTTATAGTTATGCTCTTGTTTGCACTGCCACTAATTGACTTAGTATTTTATCTACTTATGTGGTTCTTTTTAGCCTGGCACGGCATAATTCTTAAGAAACTAGCCTATCTTCTTGTTCTACATGCGCAATAATTCACTCTTAAATATTTCCTGCATGTACATAATGCTTACTATAATTACCTGGCTGTTTGAGTATTGCATATAGTCTACTACATGCACAGCCTTCCTATTTACTAATTTAATGTGTCCCTTTAAATACTAATGGAGTTGCATAAACAGATATGGGAAGATATCCTTGGCTTCGAAAACTGTGAGTTCTATATTAAAAGATGGCCTCAGTTGGATGGTATGCAATTTGAAGATGTGCTCATTAGCTTTCCTGATGCCATTCCATGTGGCATAAAGGTGGCATCTTATGGTGGCAAGATTATTTTAAATCCGGATGACTTTTATGTCTTGCAAGAGGGTGATGAGGTGCTAGTAATTGCAGAAGATGATGACACATATGCCCCAGCGCCATTACCCAAGGTAACCATTAATCTGTAAGAACAAAATTATCTGAAACTTTCTGTTCTTTTTATATCATCTATCAGGACTTTTTTTTGTATCCCTTCTGGCTCTGTAACATTAATATTGAATTACTGTTGTTAGTCATGCCATGTTTACATATTTAACTATTTTCTGTACAGCTCCTTAGATATCTTATTATCGGTGCCTGTCAGCCTGTGCATTGCTAGTCTACTTGTTGCATTTCATGAAGTATACTCATCTTGGTTGACGTTGTTTTTAAGCTCATTGCTATTTCCTCTCATTTACCATTTGGCATCTTTTATTGATATATTTATCTGAATCACTAGCCATATCCTATTTACAACTTACTGCATCAACCTAATTGCTTCAAAACTCTGTAGTATTTCACACGAGTTCTTCCAATGGTGTCTTATGCGAATTCTTCTCCTTGTAATATTGTTAGGCTCTTGAGATCCATAAGTGCAGACAACCGCATGGTTGTCAATAGAATTTTAGCTTCTGCCCAACTGGAACTAGATTGCTTTTGCACAATTCAAAAGTAATTTCTCCTGCTTTGCTCATTAAGCACCGGAAAAGACAACTGCATGAGTCAATTTATGCCTTATAGATGGCAATTACTCCCTCCATTCCAGAATATAACAACTTTTAGCTATGAATCTGGACTAGTGCATGTCCAGATTTGTAGCTAAAAGTTGCTATATTTTGGGATGGTGGTAGTATTAGCCTTTGTTGTTACTTGCTAAAAGCCTAAAACTACAAAAGCTAGCTAACTTACTAGGAAAGTTCTAACATAGATACTGCACATATATAGAGCATCCTGTAACGAAGCTTACAAAAGCGAAGTCAATTTTATTATTCAGGTTAAAGAAGCTGTTTACATAGACATTGTTCACCCCGAAAGAAATCCTCAGAAGATTCTTCTTTGTGGATGGCGACGGGATATAGATGATATGATTGTGGTAAGCCTTTCGTTGAAGCTCCTAATATTCCTTTTTCTGTAAAACTCTGCAGGTTATGAGAGGTTACCTACCTAAAGATTTTGTTGTTCCCAAGTCTCCTGAAAGAATATTGTTTTGTGGTTGGCGGCGTGATATGGAAGATATGATAATGGTAACTTGATGATAGATCGAAAACAACATTTTGTGTCCTCTATTGGAATATAATATTCCTATTGCTATGGTAGTACTAAAGGTTTTGGAGCCAAAATTTGCCTGTGTCAAAACTATGAAAAGATATAATATCCCTTCCTGTTCTGAGCTTTGCTTATTTCTAATTACTGCCACGGCAGCATGGTTGATGGAACAAGCCAATGTGCCATTAAGTGCTTAGTGTTTTGGAAAACAGACCTGATATTTCTTATTTTTGCCCTGTGTTTTATCTTTCTCAGTGTTTTTATCCCACTGTGGTGCTGTCCAATTTTTGTAGTGACTAGTGAGTTTGTACTGGCATTTGGCCTTTTGTTTCTTCACATGATCAGATCCATGGTTAGCTCTAATATCATGAGCAACTATAGTGTGTTTTGCATGATTTCCCCATGAGTTAATACTGTAGTTTGATACATATGTTGAAATGGTTGCATTAACTTAAACATCTATAATCATATGCTGTGCTTGGCTTCTCCAATTGTCATACATTTCTTTTTATATTTTTGCATTTAGTATAATAAAAAATATATTCAAACCCTTTTGTACTGAATGTCCATCAAAAAATGCAGGCCTGTCCATTTGAAAATGTAAGTACTATGAGAATTTTGTTTATATATGCTCATTTTTTTTCTTAAAAAAAAGAGTTATGTTTATATAGCAACATATGATTACCAAATGATGTACGTTGCAGTGCATGATTTTTTGTTTTGATGAATGGATAATGCATTTAATTACGATCTAGAGCAACAGTGTGACTTGGTTTTAGGTATTCAGGTACTCGATGCTTTTCTAGCGCCAGGGTCAGAGTTGTGGATGTTCAATGACGTTCCTGAGATGGACAGAGAAAGAAAGCTGATAGACGGAGGCCTGGACTTCAGTCGTCTAGAAAATATTACTTTGGTTCACCGTGAAGGAAATGCTGTTATTCGCCGTCACTTGGAGAGCCTCCCTTTAGAATCATTTGATTCTGTAAGTTCTGAGAACATAGACTGTAGTTCCTTTAGGAAAAAAGCAGTACTGTTGAACCTTCCTATGAGTACAATTGCTTGCTTCTTTCCTCCGGCTGATGCTTATATGCAACACACAGATACTGATTCTGGCAGATGAATCTGTTGAGGATTCAGCAATCCAAGCTGATTCAAGGTCGCTTGCAACACTACTGCTGATCAGGGATATCCAGGTTCTCTCTAGCCATGGGGAACTAATTTAAACTGTTGTTCAATTTTGGATTTTACTTAGGATTGCTTTAGATCATATCTCTGATCACATGCAGTTGTCTTCGATCATGTACTATTTTTCATTTCTCAAGCCTACATTAGAATATTTTGCATTTAAACAAAGATAGTTGGCTCACACCTTTAACTACTGCAGGCAAAGCGACTTCCATTCAGGGAGGCGATGGTTTCACATGTTACTCGAGGAAGCTTCTGTGAAGGTTCTTGGATTGGGGAGATGCAACAAGCATCTGATAAATCTGTCATAATCAGTGAGATTCTGGATCCTAGGACAAAAAATTTATTGTCAGTGTCAAAAATCAGTGACTATGTTCTATCAAATGAACTAGTGAGCATGGCATTGGCAATGGTTGCTGAAGATAGACAAATAAATGATGTCTTGGAGGAGCTATTTGCGGAGCAGGTATGATTCTCAGAGCTGATGGCTCCATCGTCTATTGTATGAACTAGAGTTGCTCCTAAAAAGGCTATAACAATCTGATCACATGTTTCCTCACAAACATATATGCAAATGATGTTGAAGTTGTCATCATTTAATAATATTTTTTCGGAGCATCTGATTTTAAAATAAATACTAGGGGTCTGAACCTGGCACTACGATAGGGAATTCCATTGACTTTACCTGTTGGCTATAGAGACGTTATCGTGCAAAGATGTTGTGTTGGGTTTTCTCTCGTCCAAATGTCTGTTGTCAGACATGTTCTCTGGTTTCTGGCTGACCAATGTCCAAGTTGGCATCTGAACTTTCCTTGCAGGGGAACGAGATGCAAATACGACCAGCTGATCTCTACCTTCGAGAAGATGAGGAGTTAAATTTCTTTGAGGTCATGCTACGTGGTAGGCAGAGAAAAGAGATTGTCATTGGCTACCGTCTTGTGGATGCTGAACGCGCCATAATCAATCCACCAGACAAAGTTTCAAGGCGGAGATGGTCGGCCAAAGATGTTTTTGTTGTAATTACCGAGAAAGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013919