BGIOSGA013920

From RiceWiki
Revision as of 10:09, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013920| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013920, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA013920

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013920, complete gene.

LocusTag

OSJNBA0032G11.9

Ensembl Transcript ID

BGIOSGA013920-TA

Ensembl Protein ID

BGIOSGA013920-PA

Length

3765

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:39842917..39846681

Sequence Coding Region

39842917..39844962,39845040..39845150,39845244..39845348,39846592..39846681

Genome Context

<gbrowseImage1> name=IndicaChromosome03:39842917..39846681 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:39842917..39846681 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGGACGCGGCGGCGGCGGCGGCGGAGTGCGGCGAGCTGGACGGGACGGACGCCATGGCCTACGGCGACGACCGGACGCCGCGGGACGGGATGGTGTTCAAGTCGTACGAGGAGGTGCTCAACTTCTACAAGCGCTACGCCCTCCGCACCGGGTTCGGGGTCTGCGTCAAGAAGTCGTCCTTCACCAAGGCCGGCCTCTGCCGCCGCCTGGTGCTCGTCTGCAACAAGTGGGGGGACGGGAAGGAGGACGCGTGCTACCAGGCGAGGCCGACGGCCAAGACCAACTGCCAGGCCACCGTCGTCGCGAGGCTCTGGAGCGATGGCCTGCTGCACCTCATGGATGTCAATCTGGAGCACAACCACGCGCTGAATCCCTCCGCGGCGCGGTTCCTGAGGTGCTACAAGACGTTGCCTAGTGGGATGAGTAAAGATCTGGTGGTGAGGGCTGCCAGAGGGGAATGCTCGACCTCCGGCGACATCGAGGTCCCGATATTCGATGATTGGGGGAGGCTCAAGATTGGGGAAGATGATGTAGCGGCCATCAATGGCTTTTTCGCGGATATGCAGGCGAAGCAGGCGAACTTCTTCTATCTCATGGATTTCTACGGGGAAGGCCATCTGAGGAGTGTTTTTTGGGCCGATTCGAGGTCCAGGGCAGCGTACCAATATTTCAACGACGCTGTTTGGATTGATACAACCTGCTTAAGAAATAGGTTTGATACACCCCTTGTTTTGTTCCTAGGGGTGAACCATCATGGTGAGCTTGTTCTGTTAGGCTGTGGCTTGTTTTCGGATGAGAGTACGGAAAGCTTCTTATGGCTGCTGAAGTCGTGGTTGACTTGTATGAAAGGATGGCCTCCGAATGCCATAGTTACGGATGATTGTGCCGCGATAAAAGCCGCAGTTCGTGAAGTATTTCCAAATGCACGCCATCGAATAAGTGATTGGCATGTGTTAAGAAGTATCTCTGAAAAGTTAGGAGAATCAGCACAATTTGAAGGAATGAAGACCGAATTGGAAACTGTAATATATGATTCCTTGAAGGATGACGAGTTTGAGGCAAGGTGGAATAACTTGATCAGTAGATTTGGCCTTCAGGATAATGAATGGATCACTTTTCTGTATGAAAATCGCCATTTCTGGGTCCCCGCCTTTCTGAAAGATACCTTCTGGGCTGGGTTATCTACTGTTAACCACCATGAGAGTCCAAATGCCTTCTTTGAAGATTCAATCAACCCAGAGACCAAATTGGTGACATTCCTTAGCAGCTATGTGAATCTTTTACAGAACAAATACAAAATGGAGGAAGATGATGATCTTGAGTCATTGAGTAGAAGCAGGGTGCTAGTATCGAAGTTTCCTATGGAAGAACAGCTATCTAGACTATACACCTTTAAAATGTTCACTAAACTCCAGAATGAGCTGAACGCAACCATGAATTGTGAAGTTCAGTTGGATGATTCAACATCCTCCATTGTAGTTATTGATCTAGCTGAGTCAAGCGGAGAAATGGTGAATAAAAAATATGAAGTCGTTCACTGTATGGAGACCGACAGGATGGAATGCAACTGTGGCCTGTTCCAGTTCAGTGGCATTGTTTGTCGGCATACATTATCGGTGCTTAAATGTCAGCATGTTTTTGATATACCCCCCTGTTATGTGCTTAACAGGTGGCGGAATGACTTTAAGCAGCTTCACGCCTTAGATAATCCATGGAAGGATTTGGTAACAAGTAATCATATTGAGCGCTATGATTATGTTTCTTTGCAGTGCCTCCGTCTTGTTGAGATTGGAGCATCATCAGATGAGAAGCATCAGCATGCATTAAAATTAATAAGAGACATACGACGGACCCTTCTTGATGATAATTTGTGCCGGGAATTGGAGCAGAAACTTACACCATCTGAACGTGCTATTAATGGTGACAGCCACATGCAAGCTGGCTCATCTGAGGGAGGGCCAGCAAAAAAGCGCCGTGGCCGTCCTCCCAAAAAGAGTAAAGATACAAATGTGGAGTCCGTGTCAAATCAATATGCCCATAAGGATTCTTTACTGGTATCATCGGACGTTAGTCAGAAGGATGCTTTTCATTCTTCTTCTACTGCCTCAAATCTTGGTACTCATGTCAGGACAAATGGTGTTGTTGACCTTATGGAAGAAGTTAATCCAAATGAGCTATCTTTTGATAGCCGTTATGGGGTGCAGTCTAGCCACCCACACCATTATGGCAATCAGCTGCATCCAAGCAACACTATGCAGGTTTTCATCAGACATACAGAAGGAAAGAACTCTTTCTCAAGAAAACAAACTCAAGGGAGGCATTCCCCTCTGGATGTAGAGCAGATCTAA</cdnaseq>

Protein Sequence

<aaseq>MVDAAAAAAECGELDGTDAMAYGDDRTPRDGMVFKSYEEVLNFYKRYALRTGFGVCVKKSSFTKAGLCRRLVLVCNKWGDGKEDACYQARPTAKTNCQATVVARLWSDGLLHLMDVNLEHNHALNPSAARFLRCYKTLPSGMSKDLVVRAARGECSTSGDIEVPIFDDWGRLKIGEDDVAAINGFFADMQAKQANFFYLMDFYGEGHLRSVFWADSRSRAAYQYFNDAVWIDTTCLRNRFDTPLVLFLGVNHHGELVLLGCGLFSDESTESFLWLLKSWLTCMKGWPPNAIVTDDCAAIKAAVREVFPNARHRISDWHVLRSISEKLGESAQFEGMKTELETVIYDSLKDDEFEARWNNLISRFGLQDNEWITFLYENRHFWVPAFLKDTFWAGLSTVNHHESPNAFFEDSINPETKLVTFLSSYVNLLQNKYKMEEDDDLESLSRSRVLVSKFPMEEQLSRLYTFKMFTKLQNELNATMNCEVQLDDSTSSIVVIDLAESSGEMVNKKYEVVHCMETDRMECNCGLFQFSGIVCRHTLSVLKCQHVFDIPPCYVLNRWRNDFKQLHALDNPWKDLVTSNHIERYDYVSLQCLRLVEIGASSDEKHQHALKLIRDIRRTLLDDNLCRELEQKLTPSERAINGDSHMQAGSSEGGPAKKRRGRPPKKSKDTNVESVSNQYAHKDSLLVSSDVSQKDAFHSSSTASNLGTHVRTNGVVDLMEEVNPNELSFDSRYGVQSSHPHHYGNQLHPSNTMQVFIRHTEGKNSFSRKQTQGRHSPLDVEQI</aaseq>

Gene Sequence

<dnaseqindica>1..2046#2124..2234#2328..2432#3676..3765#ATGGTGGACGCGGCGGCGGCGGCGGCGGAGTGCGGCGAGCTGGACGGGACGGACGCCATGGCCTACGGCGACGACCGGACGCCGCGGGACGGGATGGTGTTCAAGTCGTACGAGGAGGTGCTCAACTTCTACAAGCGCTACGCCCTCCGCACCGGGTTCGGGGTCTGCGTCAAGAAGTCGTCCTTCACCAAGGCCGGCCTCTGCCGCCGCCTGGTGCTCGTCTGCAACAAGTGGGGGGACGGGAAGGAGGACGCGTGCTACCAGGCGAGGCCGACGGCCAAGACCAACTGCCAGGCCACCGTCGTCGCGAGGCTCTGGAGCGATGGCCTGCTGCACCTCATGGATGTCAATCTGGAGCACAACCACGCGCTGAATCCCTCCGCGGCGCGGTTCCTGAGGTGCTACAAGACGTTGCCTAGTGGGATGAGTAAAGATCTGGTGGTGAGGGCTGCCAGAGGGGAATGCTCGACCTCCGGCGACATCGAGGTCCCGATATTCGATGATTGGGGGAGGCTCAAGATTGGGGAAGATGATGTAGCGGCCATCAATGGCTTTTTCGCGGATATGCAGGCGAAGCAGGCGAACTTCTTCTATCTCATGGATTTCTACGGGGAAGGCCATCTGAGGAGTGTTTTTTGGGCCGATTCGAGGTCCAGGGCAGCGTACCAATATTTCAACGACGCTGTTTGGATTGATACAACCTGCTTAAGAAATAGGTTTGATACACCCCTTGTTTTGTTCCTAGGGGTGAACCATCATGGTGAGCTTGTTCTGTTAGGCTGTGGCTTGTTTTCGGATGAGAGTACGGAAAGCTTCTTATGGCTGCTGAAGTCGTGGTTGACTTGTATGAAAGGATGGCCTCCGAATGCCATAGTTACGGATGATTGTGCCGCGATAAAAGCCGCAGTTCGTGAAGTATTTCCAAATGCACGCCATCGAATAAGTGATTGGCATGTGTTAAGAAGTATCTCTGAAAAGTTAGGAGAATCAGCACAATTTGAAGGAATGAAGACCGAATTGGAAACTGTAATATATGATTCCTTGAAGGATGACGAGTTTGAGGCAAGGTGGAATAACTTGATCAGTAGATTTGGCCTTCAGGATAATGAATGGATCACTTTTCTGTATGAAAATCGCCATTTCTGGGTCCCCGCCTTTCTGAAAGATACCTTCTGGGCTGGGTTATCTACTGTTAACCACCATGAGAGTCCAAATGCCTTCTTTGAAGATTCAATCAACCCAGAGACCAAATTGGTGACATTCCTTAGCAGCTATGTGAATCTTTTACAGAACAAATACAAAATGGAGGAAGATGATGATCTTGAGTCATTGAGTAGAAGCAGGGTGCTAGTATCGAAGTTTCCTATGGAAGAACAGCTATCTAGACTATACACCTTTAAAATGTTCACTAAACTCCAGAATGAGCTGAACGCAACCATGAATTGTGAAGTTCAGTTGGATGATTCAACATCCTCCATTGTAGTTATTGATCTAGCTGAGTCAAGCGGAGAAATGGTGAATAAAAAATATGAAGTCGTTCACTGTATGGAGACCGACAGGATGGAATGCAACTGTGGCCTGTTCCAGTTCAGTGGCATTGTTTGTCGGCATACATTATCGGTGCTTAAATGTCAGCATGTTTTTGATATACCCCCCTGTTATGTGCTTAACAGGTGGCGGAATGACTTTAAGCAGCTTCACGCCTTAGATAATCCATGGAAGGATTTGGTAACAAGTAATCATATTGAGCGCTATGATTATGTTTCTTTGCAGTGCCTCCGTCTTGTTGAGATTGGAGCATCATCAGATGAGAAGCATCAGCATGCATTAAAATTAATAAGAGACATACGACGGACCCTTCTTGATGATAATTTGTGCCGGGAATTGGAGCAGAAACTTACACCATCTGAACGTGCTATTAATGGTGACAGCCACATGCAAGCTGGCTCATCTGAGGGAGGGCCAGCAAAAAAGCGCCGTGGCCGTCCTCCCAAAAAGAGTAAAGATACAAATGTGGAGTCCGTGTCAAATCAATATGCCCATAAGGTATCTCCTTACGTCGACTATGTGTACTTTACGCTAGTTTGTTATTTGTACTAATCGAGTTCATTCTTGTATTGAAGGATTCTTTACTGGTATCATCGGACGTTAGTCAGAAGGATGCTTTTCATTCTTCTTCTACTGCCTCAAATCTTGGTACTCATGTCAGGACAAATGGTGTTGTTGACCTTATGGTAGTAATTATGATCGATGCTGGGTTTTGTTCCGTACATTGTTTGGTATGATAGTCTTGACTATGTAGTTACTTTTTATTGTGTACCTTCCAGGAAGAAGTTAATCCAAATGAGCTATCTTTTGATAGCCGTTATGGGGTGCAGTCTAGCCACCCACACCATTATGGCAATCAGCTGCATCCAAGCAACACTATGCAGGTTTTTTTTTTCTTTTCAACAACAAGCTTGCATTTCCATTTATGATTTTTCTCCCACATGTGCAACTGACAAAAAGAAGTAAATAATTTCTTAAAATTGGATAGTTTGGCCAAACTACATCAACAGCAGAGCACTCTAGAGTCCAGTGGATGTACCAGAATATATTTCAGGTGGATGCTTACTTTGCATTTCTAGTACTTTTGTAGAGTTTGCCAGAATCAACATTTTACTGTAGTAATGTGATTTGTATATGCACTTATGTGTTATAATAAATGTAGGACGATCAAGTGCCTTATGGCAGACGGACATGACAGCAATCAAATACTGGGTTCAGATGGTGCCATTTCAGGTTTCTTTCTCATTTTAGTTACTGTACCATTTTAGGGTTCTGACTTCTGAGCTCTAACTCCGAAGCAGTCCCACCATCAGCTCATCAGTCATCACGATTGAATGTTGCAATTTTTGATGAGCAGAGCATGGAAACAAACAGATACACTCAAAATTGTACGATATGTAGGCAAGTCTTCTACACTGTAAATTCAGGAACCCTGTATTTTGTAGTTAGATACCCCCAAACTCAATGGTAATGATACTTCACAGTTCACATTCACACTCTTGGGCACACAAACATTGATGGATAAAATTGAGATGTTGTAGGGGCAGAAATATTTCATAAACCCAGGAAATTCTGAATTTAATTAGTCCCTGTGACTACGGCATCATGTTCTCTACTAATATATGATTCACCATAACTTGGCACTGACCATAACATATATCAAGTGTTAATAGATCTGCGTCATGTGCAGTCATCTGTTGAATGGCTGTACATCTTTTTTTTTTTATATGTTGTGTCCATTCCTACCTTTTCTATTTATCAGCATAATAATTACTTACGGAGTTCACTTATATGCATGTATAGGAAAATTACTTAAGGCACCTGCAACCGCACCGTCTGAATCAATGTGAATTTTGGAGTTCCTGTATTTGATAGTGTGTAACATATATTGAAATTATAGCCTTTTGTTTTGCAATTCAACACATTAACTGTTGCCTCGCTAGAGAAGATACAGAGAAACACCTTCCAACTAGTTTGGCTATCTGGAAATTTCAGCATTTCAAATACTAAGCTCATTGCATATACTGGATAAGGAAGCTATGTTGTTTCTAATCAGGAGATAGCATTCCTTCTGGGACATTTCCAAATTCTGAGACTAATTTCTAATGATTATCTTTCACGCCGCAGGTTTTCATCAGACATACAGAAGGAAAGAACTCTTTCTCAAGAAAACAAACTCAAGGGAGGCATTCCCCTCTGGATGTAGAGCAGATCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013920