BGIOSGA013923

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Gene Name

BGIOSGA013923

Description

Pentatricopeptide repeat protein ppr1106-17

Definition

Oryza sativa Indica Group BGIOSGA013923, complete gene.

LocusTag

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Ensembl Transcript ID

BGIOSGA013923-TA

Ensembl Protein ID

BGIOSGA013923-PA

Length

3605

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:39857098..39860702

Sequence Coding Region

39857098..39857197,39857297..39857398,39857492..39857625,39857706..39857975,39858156..39858334
,39859277..39859400,39859485..39859760,39859851..39859984,39860064..39860150
,39860256..39860369,39860573..39860702

Genome Context

<gbrowseImage1> name=IndicaChromosome03:39857098..39860702 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:39857098..39860702 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAAAGATGCGGAAATCTAAGAGGACGGCTGATCATAATCTCACAAGAAGCTCCAAGAACGAAGGAGAGATAAGCAGTACTAAGTCATTGATCTCAGGCGACTTAAATTCGGGCTCTAATCAAGATGTCTGGGCTATTCTCAGTGTTGAAGTTGCATCAAATTTGTCTAAAAGCGTTGTCTCACTCACCTTGTCTGATGGAAACACACTGATATATGCATGCTCGGGCATAGCTATCGAGTGCCAGGAGGGGTCTGGTACAATTTTCCTGACCTCGGCTAGTTTGGTAACAGCTTTCTATGATACTGAAGAAGTCTATGATAACTTAAAGGTGATTGAAGTGCGCCATGAAGGCAATGAAGTGCTCAAGGGTTATTTGGCAAAATATGATTTAGACAAGAACTTTGCTGTTGTCTACACCATGGAATCTCTTGATGTTCATATTGTACTTACCGAAAATTCGAGGGATAGGTATATCAACAAAAAGTTAGTAGCTGTAGGGCGTGACAAACATGGCGTATTAATGGCCAAAAGTGTGATGGTGGCTGGTTGTCGTGATTCAAACAGATCTGAAGATAGCAAAGAAATTAGGTTGATCTCTGAGGACTGGGAAGGTGGACCGCTTTTTGATTTTGATGGGAAATTTGTTGGCATGAATCGTTTTTCGGTTATGGATAGAACATCTGTCCTGTCATGGGTCTCAATTCTCATTATTTTGAAGCATTATTTGCCATCCCTGCAAAACAGGATTCTTAAACGGTTACAAAATGTCAAAAGAGTCAGGAAAAAGGAGGTCTTTTGCATGCACGGTTTCTTTATTGAATGGAAGGGATGTACAACTATTCTGACATCTGCGAGCTTGGTTAGAGAGTCTGATGATGGAAACAAGATTGATGAAAACTTGAGGATTGAAGTGTTGCTTCCAAACAAACAACTTAGAGAAGGAACACTACAGCATTATAGTTTACACTACAATGTTGCTCTAGTGAGTGTTAAGGACAAGGATTTCCATGCTCGTCCAGCAAATATTCAGCTTGATCATAATCATGGACCTGGAGTAGCAGCCGTAGGGCGTTGCTTCGAATCAGGCAAATTAATGGCTGCACGGACGGATGTTGTTGATTGGTCGGGCACACTTGATTGTGAGATGTTCCTTATACGTTCCTCATGCAAAATCACTAAGGCAGGGATTGGAGGACCTCTTGTTGACTTAGAAGGGAAAGTTATTGGCATGAACTTCTATGATAAGAAGATAGGAACCCCTTGCCTGCCATGGAATGTGATTCTTATGGTTCTGGCATGTTTTGAGAAAGAAAGTAGCGGTGGTGAAGTTGGCAGTGGTAGTGATCCATGTGGTGCGCCTGGCTGGAAAATCCCTCGAGATGAGAGTGTCAGGCTAAACAGGTGGCCTGTGCCCCTGACATATTGGCGTCCTCATGACGATGTGGATGAACAAGAACCCCCAGAAGGCTGTGAGCACATCTACACATACATAAATGGTGAAAGATATTGTTACAGAATTTCCTGGTATTTCGGGATTCCTAATTGGATGTGGAAAACGATCAGGAACCCTAATTCTTGCCGGCCCATGGTCATGGAGCCTGAATCTGAAACGCATAAGATGTGGATGCGTTATATGTGGAGTTAA</cdnaseq>

Protein Sequence

<aaseq>MGKMRKSKRTADHNLTRSSKNEGEISSTKSLISGDLNSGSNQDVWAILSVEVASNLSKSVVSLTLSDGNTLIYACSGIAIECQEGSGTIFLTSASLVTAFYDTEEVYDNLKVIEVRHEGNEVLKGYLAKYDLDKNFAVVYTMESLDVHIVLTENSRDRYINKKLVAVGRDKHGVLMAKSVMVAGCRDSNRSEDSKEIRLISEDWEGGPLFDFDGKFVGMNRFSVMDRTSVLSWVSILIILKHYLPSLQNRILKRLQNVKRVRKKEVFCMHGFFIEWKGCTTILTSASLVRESDDGNKIDENLRIEVLLPNKQLREGTLQHYSLHYNVALVSVKDKDFHARPANIQLDHNHGPGVAAVGRCFESGKLMAARTDVVDWSGTLDCEMFLIRSSCKITKAGIGGPLVDLEGKVIGMNFYDKKIGTPCLPWNVILMVLACFEKESSGGEVGSGSDPCGAPGWKIPRDESVRLNRWPVPLTYWRPHDDVDEQEPPEGCEHIYTYINGERYCYRISWYFGIPNWMWKTIRNPNSCRPMVMEPESETHKMWMRYMWS</aaseq>

Gene Sequence

<dnaseqindica>1..100#200..301#395..528#609..878#1059..1237#2180..2303#2388..2663#2754..2887#2967..3053#3159..3272#3476..3605#ATGGGAAAGATGCGGAAATCTAAGAGGACGGCTGATCATAATCTCACAAGAAGCTCCAAGAACGAAGGAGAGATAAGCAGTACTAAGTCATTGATCTCAGGTCCGCTGGTTTTCCTATTTTCTGCATATCTTCTTGTATCGTATAACCCTATTTGAGTACTAACACTTGTGTTGTATGTATATATGGCGTTTTAACCAGGCGACTTAAATTCGGGCTCTAATCAAGATGTCTGGGCTATTCTCAGTGTTGAAGTTGCATCAAATTTGTCTAAAAGCGTTGTCTCACTCACCTTGTCTGATGGTAATTATATGTTTTGCTATTGTTATACATTGTCAAATTTATATTTGAACAATGTCCCCTGTTATAAATGGTTTAACCTGCGATCTTGTGTAGGAAACACACTGATATATGCATGCTCGGGCATAGCTATCGAGTGCCAGGAGGGGTCTGGTACAATTTTCCTGACCTCGGCTAGTTTGGTAACAGCTTTCTATGATACTGAAGAAGTCTATGATAACTTAAAGGTGGTGCTTGTTGTCATCCTTTACTAATTTTTGCTTGTTTGCTTAGGATATTTTGTGACTCCTTTCTTGCTTTGCCATTATAGATTGAAGTGCGCCATGAAGGCAATGAAGTGCTCAAGGGTTATTTGGCAAAATATGATTTAGACAAGAACTTTGCTGTTGTCTACACCATGGAATCTCTTGATGTTCATATTGTACTTACCGAAAATTCGAGGGATAGGTATATCAACAAAAAGTTAGTAGCTGTAGGGCGTGACAAACATGGCGTATTAATGGCCAAAAGTGTGATGGTGGCTGGTTGTCGTGATTCAAACAGATCTGAAGATAGCAAAGAAATTAGGTTGATCTCTGAGGTAAACTCGCATAATGATACAAGCACATCTTAACCTTTTTCTGTTACTATATCTATATGCACTAAACTTTATTATCAGGCCTGTAAAAGTGGAATTTTTTTTCTATGTGAATGTTGTTCAATATCACTTCCTTTTGTTCAAATGGAGTCCTTGTTGACCATCACTTTATATTTGTGTTAGGACTGGGAAGGTGGACCGCTTTTTGATTTTGATGGGAAATTTGTTGGCATGAATCGTTTTTCGGTTATGGATAGAACATCTGTCCTGTCATGGGTCTCAATTCTCATTATTTTGAAGCATTATTTGCCATCCCTGCAAAACAGGATTCTTAAACGGTTACAAAATGTCAAAAGAGTCAGGTATGTCTTTGCTTATGTTTGATCCTCATTGGTTCACCCACTTTATTACCCTGCATGTGTTCATACGGTAGGCTGGTTTGCATGTCAAACAACATATGAGCGAATTTGTTCTTCAATGATCTGGATTGTTAGCTGCTGTTCCTTTTTATAGGTCCTCAAAACTTCAGATCCTCTTTTTTATCTTTTTCCTTTTTCTCCTTGCCTATGATGCTACCCTGTAGGTGTTGGCATTGTGTTATGCACTGGTATGACCCGTTTTACCTTTGGGTTGGTGTTCTTCTGCAGGGATGGAGAGAGACCCACAGGTGAGCTACCTGACTATCATCAAGAAGGTGAGCACAGTGCCATAGTGCCATACCTTGGCACCACCAAACATGCATGCAAATTTTGGTTGTATGTAATGGTATCTATTTTTAATATTAGCTTTTACATTTGAACTTTCTAATTTTACATGAACTTATCGCATTTAGTTAGTGTATCTCAGCGCTAATCACTTGGCCTTGTGCAGCACCAGTACATAGATGTGGTCTCAACACAGAACAGTTTGGGTATCTAAACTCCATGGGTTATCCCAAGCCGCCAATAAATGTGTTAGACGGTGAGTCATTGTTTGTAAATTTGCTAACTTATCGCGCATCACATCTTTCTACAGTTTACTACTACGAATTAATGACTATTCTACCATGTATCTTCTACCAGATGGTATGATTTTGGCTAATTCTTTTGAAGAGACTTTTGGAGATTTATGTGGTGAAGATCTTTGGAGTGAAATCAATAAAAAGGTTCCTTGTGACATACATCAAAATGTTGTTGCACTTGCTTCATTCAAAGGTGATTTTACACTAATTAATGTGCTATATTGATTTTCCCATTTCATATTTGTATTCGGTTGTCACTAATAAATAATAATCAAATGTATGCATGATAATGCATGGTATGCAGGAAAAAGGAGGTCTTTTGCATGCACGGTTTCTTTATTGAATGGAAGGGATGTACAACTATTCTGACATCTGCGAGCTTGGTTAGAGAGTCTGATGATGGAAACAAGATTGATGAAAACTTGAGGGTGGGTGCTAATCATGTAGCTCCTCCTAATTATTTTGCTCTTTATTTTTAAGTCTCACTCACTTATTCATCAATTTATTTGCAGATTGAAGTGTTGCTTCCAAACAAACAACTTAGAGAAGGAACACTACAGCATTATAGTTTACACTACAATGTTGCTCTAGTGAGTGTTAAGGACAAGGATTTCCATGCTCGTCCAGCAAATATTCAGCTTGATCATAATCATGGACCTGGAGTAGCAGCCGTAGGGCGTTGCTTCGAATCAGGCAAATTAATGGCTGCACGGACGGATGTTGTTGATTGGTCGGGCACACTTGATTGTGAGATGTTCCTTATACGTTCCTCATGCAAAATCACTAAGGTACATACCGCTAGATAGCTGTTGATTTTAAATCTCTAGCATGTTTTTACATGCACGGTGAAAATTTATAACCATCGCGTTGGTTTGTAGGCAGGGATTGGAGGACCTCTTGTTGACTTAGAAGGGAAAGTTATTGGCATGAACTTCTATGATAAGAAGATAGGAACCCCTTGCCTGCCATGGAATGTGATTCTTATGGTTCTGGCATGTTTTGAGAAAGAAAGGTATTCGTAGATTTCTTTTCTTTTTTTTTTGGTTATTTAAGTGCTTGCAATAAAATCTATTCGATTGTGTGTTTGACAGTAGCGGTGGTGAAGTTGGCAGTGGTAGTGATCCATGTGGTGCGCCTGGCTGGAAAATCCCTCGAGATGAGAGTGTCAGGCTAAACAGGTTGGTTTTCTGATAAATCTCAACAGTTAACACTTAACACTACCAATTTACAGGGTCTCATATTATTTTCTGATCGCATTGCATATATTGGAACTAAACTAATAGGTGGCCTGTGCCCCTGACATATTGGCGTCCTCATGACGATGTGGATGAACAAGAACCCCCAGAAGGCTGTGAGCACATCTACACATACATAAATGGTGAAAGATATTGTTACAGGTAGAATCTGCTTCTTCTACTCTGTCTGTTGGATCTACTACGACGCCCGTTTGCTAGCGGAGCTTGCTGCCGTGATTCAAGATTTTGATGAGCTTGAACTGTTTGATGTACATATGCAGATTTAGACGCCAGATGTAATATATATTACTAAAGAAAGTTTATTCGAATCAAGAGATCTTTGTGTTGTGTGTTTGCTTCTGCAGAATTTCCTGGTATTTCGGGATTCCTAATTGGATGTGGAAAACGATCAGGAACCCTAATTCTTGCCGGCCCATGGTCATGGAGCCTGAATCTGAAACGCATAAGATGTGGATGCGTTATATGTGGAGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013923

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA013923&oldid=58746"