BGIOSGA013926

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Revision as of 10:10, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013926| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013926, complete gene.| tag = OsI_142...")
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Gene Name

BGIOSGA013926

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013926, complete gene.

LocusTag

OsI_14293

Ensembl Transcript ID

BGIOSGA013926-TA

Ensembl Protein ID

BGIOSGA013926-PA

Length

5548

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:39891908..39897455

Sequence Coding Region

39891908..39892243,39893230..39893340,39894059..39894133,39894554..39894614,39894795..39894868
,39894953..39895057,39895489..39895596,39895994..39896097,39896395..39896612
,39896717..39896747,39896894..39897035,39897083..39897214,39897351..39897455

Genome Context

<gbrowseImage1> name=IndicaChromosome03:39891908..39897455 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:39891908..39897455 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGCCCACCTCCTCCTCCTCGCGCGCCCGCGAGCCCTAGCCCTCGCCGCCGCGCGAGCCCCCGGTGGCGTCGCCGGCTTCAGGCGGCCCGCCTCGGCGCGCCGGGTGGCCCCGCGCCGCGTCGTACTTCGACCGGTGGCGGCGCTGGGGGGTGGTGGTGGATTTGCGGAGGTGGGGGAGCTGTTCGGGCGCGTCGAGGCGTTCCTCTACACGGTCGCGGATGCGGCCGTCTCGGCGTCCCCGGAGGTGGTGCAGGGAGGCGGCGGGGGGACCAAGGAGGCGGCCGGGGACTGGCTCTCCGGCATCACCAACTCCATGGAGACCGTGCTCAAGGTTTTAAAAGATGGTCTGTCAGCTCTCCATGTTCCTTATCCGTATGGATTTGCAATCATCCTTCTAACAGTTCTCGTCAAGGCAGCTACATTTCCTCTTACAAAGAAGCAGGTTGAGTCTGCAATTGCAATGAGGTCACTGCAACCTCAAGTTAAGGCTATTCAAGAACGTTATGCTGGTGATCAGGAAAGGATACAGCTTGAAACTGCTCGTTTATATAAGTTGTCAGGTGTTGACCCGCTCGCAGGGTGCTTGCCTACTCTTGTGACAATACCGGTTTGGATTGGTCTATACAGAGCTCTCTCCAATGTAGCTAATGAGGGACTTCTTACCGAAGGCTTTTTCTGGATACCTTCTTTGGCTGGCCCTACAACAATTGCTGCACGGCAAAGTGGCCAGGGAATATCATGGCTATTTCCCTTTACGGATGGTCATCCACCTCTTGGCTGGTCGGACACTCTGGCATACCTTGTTTTACCAGTTCTTCTTGTTATTTCCCAATATGTATCTTCTCAAGTAATGCAGCCACCACAGAACAATGATCCTAGCCAACAAGGTGCTCAAGCTGTAGTGAAGTTCCTGCCTTTGCTAATTGGTTATTTTGCTCTCTCTGTTCCTTCTGGACTAAGTCTATATTGGCTTACGAATAATATCCTTAGCACTGCACAACAAGTATGGCTTCAAAAGCTTGGAGGTGCCAAAAATCCCGTCAAAGAATACATGATAAGCTCGCTAAAGAAGAATCAACTAATCTTGGAAAGCCCGAGCCTGCTATTAAGAGTGATCCTCTCCCTAAAGTTGGTAAACCCCCGGCCAGTCAAGAGCCAGAACCAAGTGGACCACAACGTGGTGAAAGAGATTTTGGTTGGTATCTTGGTAAATGAAAAATTTAGAAAACTAAAGGAAGAAGAGTCAAGGAGAAAAGTGTTTTTGGAAAAAGCGGAACAGACAGAACAGGCAGGCACACAAGCTGGCATCGTCGATGGAAAACAGAATTCAGATGCATCTGGAGACAACATAGATGAACAGAAACTGAAGTTCTCTGTGCTGTTGACAAACTCAAAACAGGAATCTCATGAAAATGAACCAATTATAGCTAACGGCAATGGTGGACTTAGCCATAGTACAAATGAAATGATACCAAATGGAAGCATGAAAGAGGATATAATTCAGGAATCAACTGACAGCCATTCTTCAGTTATCGACCCTACGTCACATGACGCTCATAAATCGAGGGACGAAGAGAACGAACAAGATGCAGTGTAG</cdnaseq>

Protein Sequence

<aaseq>MDAHLLLLARPRALALAAARAPGGVAGFRRPASARRVAPRRVVLRPVAALGGGGGFAEVGELFGRVEAFLYTVADAAVSASPEVVQGGGGGTKEAAGDWLSGITNSMETVLKVLKDGLSALHVPYPYGFAIILLTVLVKAATFPLTKKQVESAIAMRSLQPQVKAIQERYAGDQERIQLETARLYKLSGVDPLAGCLPTLVTIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIAARQSGQGISWLFPFTDGHPPLGWSDTLAYLVLPVLLVISQYVSSQVMQPPQNNDPSQQGAQAVVKFLPLLIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVKEYMISSLKKNQLILESPSLLLRVILSLKLVNPRPVKSQNQVDHNVVKEILVGILVNEKFRKLKEEESRRKVFLEKAEQTEQAGTQAGIVDGKQNSDASGDNIDEQKLKFSVLLTNSKQESHENEPIIANGNGGLSHSTNEMIPNGSMKEDIIQESTDSHSSVIDPTSHDAHKSRDEENEQDAV</aaseq>

Gene Sequence

<dnaseqindica>1..336#1323..1433#2152..2226#2647..2707#2888..2961#3046..3150#3582..3689#4087..4190#4488..4705#4810..4840#4987..5128#5176..5307#5444..5548#ATGGACGCCCACCTCCTCCTCCTCGCGCGCCCGCGAGCCCTAGCCCTCGCCGCCGCGCGAGCCCCCGGTGGCGTCGCCGGCTTCAGGCGGCCCGCCTCGGCGCGCCGGGTGGCCCCGCGCCGCGTCGTACTTCGACCGGTGGCGGCGCTGGGGGGTGGTGGTGGATTTGCGGAGGTGGGGGAGCTGTTCGGGCGCGTCGAGGCGTTCCTCTACACGGTCGCGGATGCGGCCGTCTCGGCGTCCCCGGAGGTGGTGCAGGGAGGCGGCGGGGGGACCAAGGAGGCGGCCGGGGACTGGCTCTCCGGCATCACCAACTCCATGGAGACCGTGCTCAAGGTGAGCGTGACTCTTGACTTTGTTCTCATATCCAGCTGGTTCCAGCGTCTTGCCGTGTGCGCGCGCGCCTTCTCCATTCAGTGTTGTGCGATGCTGTCACCTATGAACCTTTCTGTGTTAAGAATGTAGCGGAGTAGTAGGTGAAAAATCTGCTTAACCTGGGTTAGATTGCTGTATTGCCCGAGAGCGACTCTCTGGGCAATGTAATCCATGTATCACTGTGTTGCTGTTAGTTGCACAGTAGTATTCTACTCTGCTGATGGGTAAAGCTTTCTCTATGAGGAATGGAGTAAATTTAATTAGCTTTCTGAGCATCCTTTTCAGATCAGGCAATTATTAGCATTCCCGTTGAAAGGAAGGGGTTTTGCCATAGAAGTGACCTTGTGACCTTGGTTCAGTCATGGGGAATTTCTTCAGCACTTTCATCCACTTAACAAAAAAAAAAGAAAGCAAAAACACGATTCCCTGATATCCATGCCCAAAGTAGTTTAGGTAAGATTTGGTTGTCATAGCTGTTGATGGACCATAAGGCAAAAAAGAACTGAAGGATATGTGTGGAGACCTCATAGGAAGAGGGAAATATGAAGTGATCACATTCATATTTGTTGTTTGGCTAATGGCCAACAATTATTACTCAATATTCTGTTTGTACTGTGCCTTATTACTAATTAGGGAATTAAATCACTTGCAACGGAAAAGTATGGCCGGAATTTCCATGCTATCTAATTTCAACTGTTTTCACTCTTTAACCGACAGTGGGCAAACGCTGTTTTACCACCAAATCTTCAAACAATTTATCTCCCTGTTCTCCTGCCACTACAATTTTTGTGCATGTGAGTGACCACCATTATGCATAATGAGTGGCCACCATTATGCATTGCATCTAGGATATCTTGTGGTTTGCATAAATTTTTATTACTCTTATAACATTATACCTTGCTTGCTACATATTTTCAGGTGATTTACATTTCTTTTTTCTATTGCAGGTTTTAAAAGATGGTCTGTCAGCTCTCCATGTTCCTTATCCGTATGGATTTGCAATCATCCTTCTAACAGTTCTCGTCAAGGCAGCTACATTTCCTCTTACAAAGAAGCAGGTTTTTTTTTTTTTTGCCATGTTGCTGCGTTAGAATAGATAGTGGTATAATTGGGTTGTGGTTATATATCATATCGTGAATTGTTCAGATTAAGGTGGTGAAGGATACTCTCTGATCTTTTTTTTTTCATAATTAAGATTACTTTTACGATCATATCACTCCATGAAAATGTTCATTTTGGCAGATCTTTCTGTGAGACATATTATAATTTGCCTGCACTTTTCACCCACATTTTTAGGAAGTAACAAGATTTACCATAACCCAACTTATGATACATTGTGATCCACAGATGAACGAATAATGTAGCTATTTTCAACACATTATTATAGATGATTTGGTACATATCTGTACTGTTCTATTTCTTATATATACCGGCTGTAGCTTCAAGCATATCCAATAAATTGGTGATTCCTTTCAGGACTTTCTTAGCGGAGCCAGTAATAAATGCATGCATGACTTAATCCATACTGACATTGTGACAGAGACTTCAATGCGGAAACCATTTGACTTCAAACATGTGTATCACATGGTTATTCACCCTGCAAGAATATTCTGTCACCTTCTGTCCCAAATCAATTGATGGCATTAGGTCTTTTCCCCTAAATATAACAGTCAAGGATTACATTGTAGTAATAAATGTTCATGCAAAGTAAAACTACACACATTCTATTCCTGCATAAATTTTTATTTTTGTTCATATTTGTTGTTTCTGGTGTAGGTTGAGTCTGCAATTGCAATGAGGTCACTGCAACCTCAAGTTAAGGCTATTCAAGAACGTTATGCTGGTGATCAGGTAGGTATATTTTACATATTGATCTGATTTACAATAATATAACATGCTCACATGTTGAATCTTCTGTGTGCACTGTGGGCTAATGGCAAGGTCTTGCATTTATTTTAGTTAGCAGTTCATTTGATTGGGGGTAAATTCCTTATTTATGTAGCAATAAACTGAAGCCCACATTAACTGGAAGATCTAAGTCCTTCCAAGACATGCAGCTAATGAGGTCATTTTGTTCAAAATGTTCTGTAGGAAAGGTACTTATTACGCAAGTGCATACTGCAAATAAACTCCATGTAAACAAACTACCATTTACCCATTTCACACGGGAGATTTAACACAATGGTGTACATTGTAGATCATATTAATGGATTTGAAATACTACCCGAGGCACTTCCATCTGTAGGTTAATTATTTATTCATATTTTCCAGGAAAGGATACAGCTTGAAACTGCTCGTTTATATAAGTTGTCAGGTGTTGACCCGCTCGCAGGTAGTACTATTTTTGATATATTTCCTATCAGTGTTTGCCCCTCAATGTTCAATGCATAGCAAGGCTTTGTAGAATAGTTTCACATTATATTGGTTTTCTGTTACCCTTTTTCTGGTAGCAACTTAGGTACATTCCTGCATTAGTTTTACTTGCAGTTGACTTAACATTTCTATACAACAGGGTGCTTGCCTACTCTTGTGACAATACCGGTTTGGATTGGTCTATACAGAGCTCTCTCCAATGTAGCTAATGAGGTTGATATGCTTGTGTTTTGTCATTTCTATTTTTGTTGAGTAAACATCCGCATCACCTGATGCATCCGTGTCTTTGTTCGAAAGGGACTTCTTACCGAAGGCTTTTTCTGGATACCTTCTTTGGCTGGCCCTACAACAATTGCTGCACGGCAAAGTGGCCAGGGAATATCATGGCTATTTCCCTTTACGGTAAGCACACAGAACTTGATAATTCCCTGGTATACCCAAGCAACTTTTGTTCATGTGCAACTTCAATTTTTTACCTAATTGTAAAATTTGACTTTTAGAATTGTGATCAGGTTGTTAAGGCCATTTGTAAGCCGGTGTTGTCTGCTTGCAGGCATTAGAAAACTGTGATTGCATGTGATTTAAATGTATGTGCACAATCTCTACTCCGTTGGTTGTTCTAGAATGTATTTGCAAAAATCAAGCACATGCACATCTAATTATTTCTGGAATTTTAACGGCGGACAGTTAATGCTGCTTGCTATTAACCTATATAAGTGCCTTGGATAGGACCATTTCTGAATGTTAGTTGACATTTATTTCATTGACCTTGGAGTCATTTCTTTTCTTCTCTTTTTTTTTTCTTGACTCCAGTGTAATTGATGATGTTGTAGGATGGTCATCCACCTCTTGGCTGGTCGGACACTCTGGCATACCTTGTTTTACCAGTTCTTCTTGTTATTTCCCAATATGTATCTTCTCAAGTAATGCAGCCACCACAGGTTTGTTCTACCAAAGTTTTCAGCATGTTTAGTCCATTGTATTCAATTCCTTTTGGTCCTCAACACTCCGATGGGAATTTTCTTATCAGTTGAATTATATCTGTATGGTGCTTCTAATGAATAAACACATAATTTCTATCGGGTTCAATTATTCTTGGTATAGAACTCAAGATTCTGAAAAGATCTCCAGAAGATTACCTGTAAAGATATGTAGTCTGTACAGTAATAATTTTGTTGAACTCTATAATTTGTTCCCTCTTCATGGGAAATAATCCGGACCACTGAAAAAGCACAAAAGATCAAGGCACACAATTTCTTTTTCTGTATCATGCCAACTTACACCAATAGCTGATTAAGTTTGTGTTCAAACTTACTGATTGCTATATTTGTCCTGCAGAACAATGATCCTAGCCAACAAGGTGCTCAAGCTGTAGTGAAGTTCCTGCCTTTGCTAATTGGTTATTTTGCTCTCTCTGTTCCTTCTGGACTAAGTCTATATTGGTGCGTGTGTTTTACAGATTTCAACCTCTCTTTATTCAGATTTTTTTCTTTTAATAATAAGAGCTTCATCATAACTTTCTTCATGGTCTATTTAGAATGAACAGAGCCAGATTTTCTACACTATTTAGAATGGCAAATATATGCAATTCGCTGTAAACCTGTTACTTTGGCTATTGAAGGAATGAAAAACTTGGTTTACATATGTGAAACTCTCATCAGGCCTAATCATTTTTCTTCTTCATTAACTGGTGAATTTTTCATAGTTTGTGGTTGTCATTAGCAATACTTTTCTTGCAGGCTTACGAATAATATCCTTAGCACTGCACAACAAGTATGGCTTCAAAAGCTTGGAGGTGCCAAAAATCCCGTCAAAGAATACATGATAAGCTCGCTAAAGAAGAATCAACTAATCTTGGAAAGCCCGAGCCTGCTATTAAGAGTGATCCTCTCCCTAAAGTTGGTAAACCCCCGGCCAGTCAAGAGCCAGAACCAAGTGGACCACAACGTGGTGAAAGGTACTGTCTAGTTTTCAGATATTGCTTGTTGAATGCCTGCATTATTTCAGCCGTGGTCACAAACCATTAGATCGATGAGCCTTACAATAATGGACATTCAACAGAGATTTTGGTTGGTATCTTGGTAAATGAAAAGTTAGTTAATTCCTAGAAGCTAATCTAGTTGTCCAGTTGTGATTGATATTTAAATGCAGGAAATGTCCAATTGTAGTTTCCTGAATCTCACAAGTTAGGGGAAAACATGAGTACTTAAAATATATTCTATTCATTTTGAGTTTCAGATTTAGAAAACTAAAGGAAGAAGAGTCAAGGAGAAAAGTGTTTTTGGAAAAAGCGGAACAGACAGAACAGGCAGGCACACAAGCTGGCATCGTCGATGGAAAACAGAATTCAGATGCATCTGGAGACAACATAGATGAACAGGTGAGGCATTTTTGTAATTTTGTTGATTGTTTTATCACTTATTTCAGAAACTGAAGTTCTCTGTGCTGTTGACAAACTCAAAACAGGAATCTCATGAAAATGAACCAATTATAGCTAACGGCAATGGTGGACTTAGCCATAGTACAAATGAAATGATACCAAATGGAAGCATGAAAGAGGTATGCTTTGTCCTTATCAAGGCAACAAACATCTTTAAGTAGGTAAAGTAGAGAAACAAATAGCAAAACTCTCTCAGACCCAAGTTTCAATCAATCAAAGGTATTTAGATTCTAATATAACCATTCTATATTGTAGGATATAATTCAGGAATCAACTGACAGCCATTCTTCAGTTATCGACCCTACGTCACATGACGCTCATAAATCGAGGGACGAAGAGAACGAACAAGATGCAGTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013926

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA013926&oldid=58749"