BGIOSGA013933

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Revision as of 10:10, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013933| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013933, complete gene.| tag = OS03G08...")
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Gene Name

BGIOSGA013933

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013933, complete gene.

LocusTag

OS03G0846400

Ensembl Transcript ID

BGIOSGA013933-TA

Ensembl Protein ID

BGIOSGA013933-PA

Length

5676

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:39997416..40003091

Sequence Coding Region

39997416..39997461,39999008..39999130,39999213..39999314,39999406..39999536,39999620..39999889
,40000061..40000239,40001339..40001382,40001567..40001650,40001738..40001854
,40001945..40002069,40002149..40002421,40002519..40002650,40002782..40002870
,40002974..40003091

Genome Context

<gbrowseImage1> name=IndicaChromosome03:39997416..40003091 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:39997416..40003091 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTGCAGCTACCTTTCTCCCCCAAAGAGAGTTGGAGTTCACCAGTCAATTCAGCCATTGGGCACGTGCGGAAAATTAGGAGGAGGGCTGGTCATTTTCTCTCAAGAAGCTCCAAGAATAAGGCTGCTCACAGTAAGGGGGGACAGACAACCAAGTCATTGATCTCAGGCGACTTACATTCGGGCTCTATTCAAGATGTCTGGGCTACTCTCAGCGCTGAAGTTGCATCAAAATTGTCTAAAAGCGTTGTTTCTCTGGCTTTGTCTGATGGAAACATACCGATATATGCATGCTCAGGCACAGCTATCAGTTGCCAGGAGGGGTCTGGTACAATTTTTCTGACTTCGGCTAGTTTGGTTAGAGCTTTCTATGATACTGAAGAAATTTATGATAACTTAAAGATTGAAGTGCGCCATGAAGGCAATGAAGTGTACAAGGGTTATTTGGCAAAATATGATTTAGACAAGAACTTTGCTGTTGTCTACACCATGGAGTCTCTTGATGTTCATGTTGTACTTTCCGAACATTTGAAGGATAGGTATGCCAAAAAGAAGCTAGTAGCTGTATCGCGTAACAAGTATGGCGGATTAATTACCAAAAGTGTGATGGTGGGTAGTCATCATAATTCAAACAGATCTGAAGTTTGCCATGACATTTCGGTGATGGCTGAGGACTGGGAAGGTGGACCTCTCTTTGACTTTGATGGGAAATTTGTTGGCATGAATAAGTTTTTGGCTATGGATACAACCTTTATCCTGTCATGGATGTCAATTCTCATTATCTTTAAGCATTATTTGCCAACCCTGCAAAACAGGATTCTTAAACGGTTACAAAATTTGAAAAGAGTCAGGGATGGAGAGGGACCGGGTGAGCTATCTGACTGTCATCCAGAAGTTCATAGAGGTGGTCTCGATAAGGAACACGTTGAGTATCTAAACTCCTTGGGTTATCCCAAGCCACCAGTAAACGTGTTAGATGATGGCTTGATATTGGCTTATTCTTTTGAGGAGAATTTTGGCTTTGTATATGGTGAAGTCATTAAAAAGTTTCCTTGTGACATACATCAAAGTGTTGTTGCACTTGCTTCATTCAAAGGAGAAAGGAGATTTTTCGCATGCACGGGTTTTTTTATAGAATGGAAGGGATGTACAATTATTCTGACATCAGCGAGCTTGGTTGCAGAGTCTGGTGACAGAAACAAGATTGATGAAAACTTGAGGATTGAAGTGTTGCTTCCAAACGAACAACGCAGACAAGGAACATTACAGCATTATAGTTTACACTACAATGTTGCTCTAGTCAGTGTCAACGACATGGATTTCCATGCTCGTCCAGCAAATATGAAGCTTGACAATGAGTGTCCACCTCAAGTAGCAGCTCTAGGGCGTTGCTTCGAATCAGGCAAAATAATGGCTGTATGTGGGGATTTGGTTGACTGGACTGGCACACTTGATTGCAATTTCCTTATACGTTCCTCATGCAAAACTACTAAGGCTGGAATCGGAGGACCTCTTATTGGTTTGGATGGGAAAGTTATTGGCATGAACTTTTATGATAAAAAAATAGGAACCCCTTACATGCCATGGGATGTAATTCTTAAAATTCTGGCATGTTTTGAGAATGAAAGTAGTGCTGCTGAAGTTGGCAATGGTAGTGATCCATCTGATGCGCCTGGCTGGAAAATCCCTGGAGATGGCAGTGTCAAGCTAAACAGGTGGCCTGTGCCCTTGCCATATTGGCGTCCTCATGACGATGTGGAAGAGCAAGAACCCCCAGAGGGCTGTGAATACCAGTGCACATACAGAAATGGTGAAAGATGGTGCTACCGGTAG</cdnaseq>

Protein Sequence

<aaseq>MLQLPFSPKESWSSPVNSAIGHVRKIRRRAGHFLSRSSKNKAAHSKGGQTTKSLISGDLHSGSIQDVWATLSAEVASKLSKSVVSLALSDGNIPIYACSGTAISCQEGSGTIFLTSASLVRAFYDTEEIYDNLKIEVRHEGNEVYKGYLAKYDLDKNFAVVYTMESLDVHVVLSEHLKDRYAKKKLVAVSRNKYGGLITKSVMVGSHHNSNRSEVCHDISVMAEDWEGGPLFDFDGKFVGMNKFLAMDTTFILSWMSILIIFKHYLPTLQNRILKRLQNLKRVRDGEGPGELSDCHPEVHRGGLDKEHVEYLNSLGYPKPPVNVLDDGLILAYSFEENFGFVYGEVIKKFPCDIHQSVVALASFKGERRFFACTGFFIEWKGCTIILTSASLVAESGDRNKIDENLRIEVLLPNEQRRQGTLQHYSLHYNVALVSVNDMDFHARPANMKLDNECPPQVAALGRCFESGKIMAVCGDLVDWTGTLDCNFLIRSSCKTTKAGIGGPLIGLDGKVIGMNFYDKKIGTPYMPWDVILKILACFENESSAAEVGNGSDPSDAPGWKIPGDGSVKLNRWPVPLPYWRPHDDVEEQEPPEGCEYQCTYRNGERWCYR</aaseq>

Gene Sequence

<dnaseqindica>1..46#1593..1715#1798..1899#1991..2121#2205..2474#2646..2824#3924..3967#4152..4235#4323..4439#4530..4654#4734..5006#5104..5235#5367..5455#5559..5676#ATGTTGCAGCTACCTTTCTCCCCCAAAGAGAGTTGGAGTTCACCAGGCAAGCTGTTCTTTTTTACTTTCGTCTCCCCTTGTTCCTCGATCGATCTAACAGTCGCCCATCGCCGCCTCCGCCTCGTCTCCCCTATCGCTTGTCCTCCACCTAACCCAGCCCGACGGTGAACCGGGGAAACTGGGGCTGGCCTTGGATGACGTCCTTCTTGGTGTAGTCGTCGTGCCTTGCCGGGGCGGGGCCAGCAGATGGGCAGGCCTAGGGCTGAATTCATCAATTTTAGTTATTATTAGGCATCATATGTTTCAAAATTTTCATAGAATTTGAAGCCAAGGCCTCTAAACTAATTACCCTATGTCTGGAGTTCTTGCATGTACGATTACGATTAGGAGGGTGGAGTGGGAGGGGAAAAGGATAAAGCGGGGTGGAGTGGGAGGGGAAAAGAATAAAGCCCCCAAAACTACAACTAAGCAATCTGCACCCATACAAGCATCCAGATCCATTCTAATGCTCAGATATAAAACTCACTACACAAGTGGATCTACCTTAATACTTATAAGCCACAGGCTGAACATTTAATTTACTTCATACTAGTTAGTTTCACGGATGAACATGAACCAGATGTATGTTCAGCTGTCGACCAGCCTTCTTTTCGCCACGGAATCTGCCTGGCACTTCCTTTGCTCTCCGCTGTGCTGCTCTGTACACTCCTATGTGACCACTGATTGCACGTCCTCCTGTTTCACTGCAAAGCCACAGGGATTAATGTCTGAAAAAGCTTGCTCAACTATGGGCATGGTGGAGTGCTAGCTTCAACTTTTTTTTTTAGAAATGAGATCATTATATATCGGAGAAAGCCTAACACAATCAGAAACCCAACTCACACACGCACCCGCACACTGGGGACACTCCAGCTTACAACCAAGTTCTGAAACATTTCACTAACATCTAAGGCCCTGTTTGTTTCAGCTTAAGATTATTGTAATCTAGATTATTAAATCAGATTACTCTAAGCTAGATTATAATAAGCTGACATAAAATAAGCTACGAGTTGTTTGTTTCTCTAGATTATTAGAGGCATCTAAGGGTAGTGGGTCTTTATCCACTCAATAATCTGGAAAAAGCTCCTCTAGAGGAGATTATTGGATTATAGTAATCTGGCTTATAGATTATAATAATCTAGCATAATAATCTACTTGTTTGTTTCAGCTTACTCCTAATAATCCAGATTATAATAATCCTAAGCTGAATCAAACAGGGCCTAACTCCAGCACCACTCCTGGAAACAGAGAGAGACAGCAAACTTCTAGCTCCTACAGACCACCCAAAGCTAGCCTGAAATAGCAGCCAACTGTTTTACCCTGGTTGCCTGGCCGATCCAAGTTTGTACCAACTAGCCTATTATTACCTCCGTCTTGTCCAACTATATGCAGGGACTAAGGAACTGGCAACTTCACTGGGCCATCAACCTTGACATTAATCCACCTGTATTATTACCCGCTACCATTCCTTTCGTTAGAGCTCTGATGCATGGTTTTGCAGTGTTTCTTTACTGTTTATGACACCACACTTTTTTTTATTTTGCTTAATTCAGTCAATTCAGCCATTGGGCACGTGCGGAAAATTAGGAGGAGGGCTGGTCATTTTCTCTCAAGAAGCTCCAAGAATAAGGCTGCTCACAGTAAGGGGGGACAGACAACCAAGTCATTGATCTCAGGTCCGCTGGCTTCCCTTATATGCATATCTTCTTTTCACCTCTATTTGAGAACTAAGACGTGTTTTATGGTGTTTTAAACCAGGCGACTTACATTCGGGCTCTATTCAAGATGTCTGGGCTACTCTCAGCGCTGAAGTTGCATCAAAATTGTCTAAAAGCGTTGTTTCTCTGGCTTTGTCTGATGGTGATATATGTTACCGTTATACATACATTCACAAATTTATATTTTAATAGTGTCCCCGGTTATAAATGGTTTAACCTGCAATCTTGTGTAGGAAACATACCGATATATGCATGCTCAGGCACAGCTATCAGTTGCCAGGAGGGGTCTGGTACAATTTTTCTGACTTCGGCTAGTTTGGTTAGAGCTTTCTATGATACTGAAGAAATTTATGATAACTTAAAGGTTGGTGCTGCTAATCATCCTTTACTAATTTTCGCTTGTTTGCTTAGGATATTTGTGACTTGTTTCTTGCTTTGTCATTATAGATTGAAGTGCGCCATGAAGGCAATGAAGTGTACAAGGGTTATTTGGCAAAATATGATTTAGACAAGAACTTTGCTGTTGTCTACACCATGGAGTCTCTTGATGTTCATGTTGTACTTTCCGAACATTTGAAGGATAGGTATGCCAAAAAGAAGCTAGTAGCTGTATCGCGTAACAAGTATGGCGGATTAATTACCAAAAGTGTGATGGTGGGTAGTCATCATAATTCAAACAGATCTGAAGTTTGCCATGACATTTCGGTGATGGCTGAGGTACACTCGCATTAATACAAGCACATTTTGACACATTTCTGTTACCATATGCGCTAAACTTTATCAGAGCCTATAAAAATGGTCTTTTTTTTTCTATGCAACTCTTGTTCAATATCACTTTGTTTTGTTGAAATGTAACCCTTGTTGACCATCACTTTATATTTGTGTTAGGACTGGGAAGGTGGACCTCTCTTTGACTTTGATGGGAAATTTGTTGGCATGAATAAGTTTTTGGCTATGGATACAACCTTTATCCTGTCATGGATGTCAATTCTCATTATCTTTAAGCATTATTTGCCAACCCTGCAAAACAGGATTCTTAAACGGTTACAAAATTTGAAAAGAGTCAGGTATGCCTTACTGATGTTTGCCTCTCGCTGGTTCACCCACTTTTTTCTATCCTCTTACCCTACATGAGTTTATATACAGTAGGCTGATTTGCATGCAAACACATATGAGCTCTTATATGTTCTGCAATGATCTGGATCAATAGCTGTTGGTTCTTAGCCACCTGTACCAAGGCAGTTGACGTCCATTTGTGTGTATCACAGTCAGTGCAGTCAAAAGTGTTAAACAAGCCCTCCTCCCCTTTTAGGTCTTAAGTGCAACTGTGCAAGGTGCTAGGGCACACAAGTGCTCACTCTAGAGGAAAAACAGTGAGGAAGAAAAAAAAAAGGATGAATAGGCTAAGCTGAGCTTCTCATCCTGCCTCCTTTGGCCACCTTCCTCGCCTGTCAGTGAGCTTGGTCCAAAAGCTACTGCTTTGCCCTCCTAGGAAGCACTGTGAGCTCGGTCTGGCAGCTGTGCGAGCTTGGTCTGGCTAGGTTAGAGGGAAAGGAGAAGGGATAGGGGCATGCATGGTTGTCATTATTGTGCTGAGGGAATAGTAGAGGGGCAATGTGTGGCACACAACGAGAGAACCGTGCTGCTGAACAGAGGATAACGCCTTGATGCGTCCTTGTCTGATTTATGGTTTTTGAAGAAGCAAACGGAGGTGAATGAGCACTGTGGGCTGTTTGGTTGATTGAGAGGTAGGACTAGTGGGCTAGTTCATATTTGTCAGATGCACGCCTGTTTTCCCCATTTGCTCTTTTCGCCTAAGGTGACAAGATGACAGCGTGCATTCGTTTTTCACTTGAACCAATAATAATTTTGCTGTATAAATTAGTCATATTTCTTGTTTCCATTGGTGAAGCCTGTTTTGTCTAATTTAAAGGAAATGTGCACACTAAAGGGATTATGATATTTCACAGTTCTGGTGATCTTTTGATGCTCAACTTACCCCTTGTTTTCTTGAAATGTGGGTACAAACCCACACAACTTGGGATCCTCTTTTCTCTCTCTGTTTTACCCTTGCCTATGATGCTACCGTGGTAGGTTTTTGTACTGTGTTGCATATTAATGCACTGGTATGACCTGTTTTACCTTTGGGTTGTTGTTCTTCTGCAGGGATGGAGAGGGACCGGGTGAGCTATCTGACTGTCATCCAGAAGGTGAGCATAGTGCCATACCTTGCATATATTGTGGTTATCTGTAATGTATCTATTTTTAAGGTTCTCACTGGTGGTGCGGGATTAGCTTTTACATTTGAAGTTTCTATTTTATATGAACTTATCACATCTAATAGTAGTGTATTTCAGTGCTAATCAGTAATCATTTGGCCTTGTGCAGCACCAGTTCATAGAGGTGGTCTCGATAAGGAACACGTTGAGTATCTAAACTCCTTGGGTTATCCCAAGCCACCAGTAAACGTGTTAGATGGTGAGTCGATGTTTGTAAATTTGCTAACTTATTGCGCACCACACCTTTTGTACACTATTGACTATTCTACCATGTATCTTCTTCCAGATGGCTTGATATTGGCTTATTCTTTTGAGGAGAATTTTGGCTTTGTATATGGTGAAGTCATTAAAAAGTTTCCTTGTGACATACATCAAAGTGTTGTTGCACTTGCTTCATTCAAAGGTGATTTTACACTAAATAATATAATGTGCTATTCATATTTGCATTTGGTCCTCACTAATAAACAATAATCAAAACTATGCATGTGTGCAGGAGAAAGGAGATTTTTCGCATGCACGGGTTTTTTTATAGAATGGAAGGGATGTACAATTATTCTGACATCAGCGAGCTTGGTTGCAGAGTCTGGTGACAGAAACAAGATTGATGAAAACTTGAGGGTGGGTGCTAATTAATTAGCTCCTCCTACTTATTCTGCTCTTTGTTTAAGTCTCACTCACTTCATTAATTTATTTGCAGATTGAAGTGTTGCTTCCAAACGAACAACGCAGACAAGGAACATTACAGCATTATAGTTTACACTACAATGTTGCTCTAGTCAGTGTCAACGACATGGATTTCCATGCTCGTCCAGCAAATATGAAGCTTGACAATGAGTGTCCACCTCAAGTAGCAGCTCTAGGGCGTTGCTTCGAATCAGGCAAAATAATGGCTGTATGTGGGGATTTGGTTGACTGGACTGGCACACTTGATTGCAATTTCCTTATACGTTCCTCATGCAAAACTACTAAGGTATGTACCGCTAGCTAGCTGTTGATTTAAAATTTCTTGTCTATTTATACACGGTGATTGATTACAAATGACAATTTGTCCATGTCACTCAACGTAGGCTGGAATCGGAGGACCTCTTATTGGTTTGGATGGGAAAGTTATTGGCATGAACTTTTATGATAAAAAAATAGGAACCCCTTACATGCCATGGGATGTAATTCTTAAAATTCTGGCATGTTTTGAGAATGAAACGTATTTGCGGATTTCTTCTCTCTTTTGGTTATTCAAGTGCTTGCCATCTGATGTCTTCATGTTATTTTTTTTTTAAAAAAAAGACTTGGCTGTAAGATTTGCTAAATATAATTCAATGGTGTGCTTGGCAGTAGTGCTGCTGAAGTTGGCAATGGTAGTGATCCATCTGATGCGCCTGGCTGGAAAATCCCTGGAGATGGCAGTGTCAAGCTAAACAGGTTTTCTGATATTTTATATATATATATATATATATATATATATAACAGTGACAAGTTACGTCTCAAAATCCTCATCACATTGCGTATATTGAACTACATACAGGTGGCCTGTGCCCTTGCCATATTGGCGTCCTCATGACGATGTGGAAGAGCAAGAACCCCCAGAGGGCTGTGAATACCAGTGCACATACAGAAATGGTGAAAGATGGTGCTACCGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013933