BGIOSGA013953

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Revision as of 10:10, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013953| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013953, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA013953

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013953, complete gene.

LocusTag

OSJNBA0015N08.12

Ensembl Transcript ID

BGIOSGA013953-TA

Ensembl Protein ID

BGIOSGA013953-PA

Length

6055

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:40251546..40257600

Sequence Coding Region

40251546..40252109,40252323..40252460,40256054..40256121,40256222..40256370,40256468..40256524
,40256905..40256943,40257437..40257600

Genome Context

<gbrowseImage1> name=IndicaChromosome03:40251546..40257600 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:40251546..40257600 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCAGAGAACATTGAGCTTATTACTCCTTCAGAGATCACCACTCTTTTAGAGAGTACCCTGCTCACCACTCCTTTACAAAGAACTTCATCAACACCAAATGACTGCAACACTATCATGCCTATATCTCTATCTGTGTACTCAAGTCAGCACATTCTTGGCTTGGTCAAAGAGATTATGTCCGATGTAAAATTGAGACCCTATATCGTTGGAGCAGTCTGCGTTGTGGGAGTCATAGTAGCCTATATTCTTTACAAGAAAAGAACAGCTGCTCTCAACAATAGAAATCCCAATGGAGGGGACGACATTGCTGATGATTTTTGGGGCAATTGGCATGATGGGAACCTGGAGATGTTTGATGATAGCAATGACCATGGTTCTTCAGACGATGAAGGAGCCATTCACGATATTGTTGCCACTTCCTGGAGAAGGTTTTCAATTCAATATTATTGCTATTACTGGAGGAGGGTTCCAATTCCTGTTGAGGTATTTGGCAGTGATTCTTCAAACGATGAAATTCAGAATGTTGCTATTCCTGGAAGAGGGTTCCAATTCCTTGTTCAGGTTGCCATACCAGTCGCCCCCACATTCAAGGTGTTCATGGCATTGACAAAGTTTGAAGGGTTCACTGCACCCCCTTACAGCCCTAACAATAGCAAGAACCTTCCCCTAACAGCAGCCCTCCTCAAGTTTATTGATGCGATGAACAAGGAGAGGCTTATGAAGATGGCCGGCGCCGTCCGCACCGGCGGGAAAGGCACCGTGCGCAGGAAGAAGAAGGCCGTCCACAAGACGGGGACCACTGACGACAAGAGGCTGCAGAGCACGCTCAAGAGAGTAGGTGTCAACACCATCCCCGCGATCGAGGAGGTCAACATCTTCAAGGATGATCTCGTCATCCAGTTCGTCAATCCCAAAGTGCAAGCTTCCATCGCCGCAAACACATGGGTGGTCAGTGGCTCCCCACAGACCAAGAAGCTTCAAGATGTTCTTCCTGGGATCATTAACCAATTGGGTCCTGACAACATGGAGCACCTAAAGAGGATTGCTGAAGAGATGCAGAAGCAGGTAGCTGCTGCAGGTGCCACTGCCCAGGCAAAGGAAGAGAACGATGATGATGTTCCAGAGCTTGTTCCGGGAGAGAATTTCGAAGAGGTAGCTCAGGAGACAAAAGCCTGA</cdnaseq>

Protein Sequence

<aaseq>MSENIELITPSEITTLLESTLLTTPLQRTSSTPNDCNTIMPISLSVYSSQHILGLVKEIMSDVKLRPYIVGAVCVVGVIVAYILYKKRTAALNNRNPNGGDDIADDFWGNWHDGNLEMFDDSNDHGSSDDEGAIHDIVATSWRRFSIQYYCYYWRRVPIPVEVFGSDSSNDEIQNVAIPGRGFQFLVQVAIPVAPTFKVFMALTKFEGFTAPPYSPNNSKNLPLTAALLKFIDAMNKERLMKMAGAVRTGGKGTVRRKKKAVHKTGTTDDKRLQSTLKRVGVNTIPAIEEVNIFKDDLVIQFVNPKVQASIAANTWVVSGSPQTKKLQDVLPGIINQLGPDNMEHLKRIAEEMQKQVAAAGATAQAKEENDDDVPELVPGENFEEVAQETKA</aaseq>

Gene Sequence

<dnaseqindica>1..564#778..915#4509..4576#4677..4825#4923..4979#5360..5398#5892..6055#ATGTCAGAGAACATTGAGCTTATTACTCCTTCAGAGATCACCACTCTTTTAGAGAGTACCCTGCTCACCACTCCTTTACAAAGAACTTCATCAACACCAAATGACTGCAACACTATCATGCCTATATCTCTATCTGTGTACTCAAGTCAGCACATTCTTGGCTTGGTCAAAGAGATTATGTCCGATGTAAAATTGAGACCCTATATCGTTGGAGCAGTCTGCGTTGTGGGAGTCATAGTAGCCTATATTCTTTACAAGAAAAGAACAGCTGCTCTCAACAATAGAAATCCCAATGGAGGGGACGACATTGCTGATGATTTTTGGGGCAATTGGCATGATGGGAACCTGGAGATGTTTGATGATAGCAATGACCATGGTTCTTCAGACGATGAAGGAGCCATTCACGATATTGTTGCCACTTCCTGGAGAAGGTTTTCAATTCAATATTATTGCTATTACTGGAGGAGGGTTCCAATTCCTGTTGAGGTATTTGGCAGTGATTCTTCAAACGATGAAATTCAGAATGTTGCTATTCCTGGAAGAGGGTTCCAATTCCTTGTTCAGGTATTTATCCCTGAATTATTTTCATAATGAGTTTTCAGATCATGTACTGAATTAATCATTTGGAGTTAGTGCTATTTCTGGCTTCGTGAAAGTATAGCCCTCTGTCCATGCTTATTACTATCTTAATTAATATCTTTAAAATTACATTGCTTTTACTCTCAGGTTGCCATACAGTCATTAATATCTTTAAAATTGCATTGCTTTTACTCTCAGGTTGCCATACCAGTCGCCCCCACATTCAAGGTGTTCATGGCATTGACAAAGTTTGAAGGGTTCACTGCACCCCCTTACAGCCCTAACAATAGCAAGAACCTTCCCCTAACAGCAGCCCTCCTCAAGTTTATTGATGCGGTGAATCAAGGCTCCTTAAAGCCATCAGTAGTCTTCCCCAGTTCTCAAATTTCTGGATTCAATAGATCAAGGCTCCTTACCACCAGTACCAGTCATCCTGCAGTGCATGAATCCAATGGATCAAGGCTCCTTTCACTCAGTGCTTAGACCCCAGAAGCTGCGGCATGCAGGATATATATAGCTAGGACCCGACCTATTTGTCATTCAAAGGAGAGGAAATGTAGCATAGATAGATAGCATTGTTGGTTCGAGAGTTCATACATATTTGCCGATACTTGCTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGTTTGTCCCAAGGCTGAAACTCACAGCTTCATCAGCTCCAAGAGCTAATGCTTCCACTTCGCTAATCCCCTCCCTGGATGAAAGAAAGATTACGAATAGTGCTGCAGGGAGTTTACTCTCTTCTCGTATGGTTTATGAATCGTCATTCCAAAGCCAACCTCTCTGTGCAAACTGGAAGTTTATCTGGAAAAGTAAAGCTCCACCGAAGATTCAATTCTTTGCCTGGTTACTTGTGAAAGAACGGCTCCCGACAAAACAAAACCTCCTCAAGAAGAAAATCGTGACCTCAGATATTTGTGAGCTTTGTAACAGTGAACAAGAAACAGCCTTCCATTTCTGCTTTCGCTGCCCTTTCGCTGCATCATTCTGGCAGAAAATGGGGATCCAGGCTGCTATTAACTCGATGTCGGAGCTCGCTCAACTTCAGAAGCCCCACTGTCTGCCGGCAAAGCATTTCCAAGTTTTCTTCCTACTCTGCTTCTAGGGATTGTGGAATCATCGTCATGATGTCGATATCTCTCCCACGCCTAGTTGCAAAGTGCTTAGAAGATGCTGCTCATTGGGCAGAGCGTCTGAAGATAGACGACAGGATTGTGGTTTCCGTTTGGAAGGAAATCATTTCTTCCTCCCTTCGTATCTCTCCCCCTATGTAAATGTAATCTGTGTACTTTTCCGCCCCTTTTAATGAAAACTAGCATGGTGGCCCGCGCAGATTGCGCGGCTAGCATCATTATGTTTTCTCTTATATAATAGCATATATGTTTTCTCATTATATTATTAAAATATATTACAATGACAACATAATTTTAAATTTTGTAATAACTCTACGAAACTACTAATGTGTAATATTAATATTGTATTTTATATACGTGTTAGTTATTAATTATTTTTAATATCAAATTTTAGTTATTTGTAAATTATATATATTCCTATATGGACTCTAGACTCGTATTTTAATATTTCTTTTTTTTAATTCTGAATTTTTATTATTTCTAATTGTATTTCTATGTGGACTCTAAACTCATCTTTCAATATTCTTTAATTTTTAATTTCAAATTTCAGTTACTTCTAAATTGTATTTCTATATTGACTTTAAACTCTTCTTCCCATGTTTTTCTTAATTTCAAATTTTAGTTATTTGTAAATTATATGTATATATGGACACTAAACATTATATTCATTTGATTATGTTTATTCCGAATTTTAGTTAGTTTTAAATTCCTATATGGACTCAATACTCTACTTCTAATATTCCTTATTTTTGAATTCCGAATTTCTATTTTTTTTCTTAATTGTATTTCTATATGGACTCTATACTCTATTTCTAATATTCCTGAGTTTTAATTCTGAATTTCTAGTATTTCCTAATTGTATTTATATATGAACTCTATACTCTACTTCTAATATTCTTTATTTTTAATTACAAATTTCAGTTATTTCCTATTTGTATTTTTATATGGACTCTAGTCTCCTCTTCTAATATTTCTTATTTTTTTAATTCTGAATTTCAACTATTTCTGAATTGTATTTCTATATGGACTCTAGTCTCCTCTTCTAATATTCCTTATTTTTTAATTCTGAATTTCAGCTATTTCTAAATTGTATTTCTATATGGACTCTGTTTTTTCTTTTTCTCCGATTAATGTGAGAATTTCTAGGCCATGAGAGCGAACGTGGAGGCTCCTTTTTCTATCCTTTTTATAATATAATAGATTCAGGTGAGGAGCCCCCCCCTCTGAACAGTACTACGTGGTTACGCTCAATTTTAACTTTCAATGGGACAATTTATTTTCATGAATTTTGTAACATTTGTCGACTCGTTTTTTCGTGTATTCATTTCAGATTGTCTTTGCTCACTCCTTGATTTTTGTGTATTCATTTAATATGGTCTTTGTTCACTCCTTGATTTTTGTCAACTACTCCATTATTATTAGCTTAGTAGTAACTACTAATATACTCCCCACGTTATATATAAGTATTTGACATTCAAACAATATTCGGTCGAACTTTTTGAAACTTTGACTCTTAAGTTAATTTATGTGAGAATAAATTTATGAAATCTAATATGCAACCGTAGCATATTTACAACACAAAACCAAATTATATATTTCCTTGGAAAAACATTTAATAGTTAGTATTGAAGATCATTTTTTAAAGAAAAAGACTGAATACTGATTTTAAATATTAAATATTTATGGCCGAACTGAGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGCAGCAAAAACCCAGCTCCATCCCCGTAGTACAAATTCGTGGAGCAGCTCTGCCAACTCCGCTCCAACATATTGAGAATCTATACCGTTTGGCACAGCTCCAGCTCTAGGTAAGTTGGAGTTGGGAGCTGGAGCTGTGCCAAACAGGGCTGGAGCTGAAACTGTTTGGCTGAGCTCCAGCTCCAGGAGGGGTGGAGCTGGAGCTAGAGCTGTGCCAAACATGCCCTTAGTCAGCTCCACAACTCCACTCCAAACTCAACTCATGAAGTTAAATTTAGAAGTTAGAGATCTACCAAACGGGCTATTCAGGCATAGAAATTCGGAATAAGTTCATCTGAGGTCCCTTAACTTTACACCGAATCCGATTTTCGTCCTTGAGTTCACCACCGAGGGATCTCGTTTGCACCGATTTTGACAGTTAAGGACTGGTTGATCTGGTTTTGGGGTTAAAGGACGAAAATCGGATTCGGTATAAAGTTAAGAGACATCGGATGAACTTACTCCTAGAAATTCCCACTCAAAACTTCCACACGAATACGACCGGGCCAGTTATTGTAGTACAGTAGTAGACGAGATGGTTGTGGGCCGGGCCCAAACCTTTGGGCCGGCCTGACCGTTCCATATATGGAAAGGCCCAGGAATTCGTTCACAAAACCCTATAATCCTCGCACCCCCCAACACCTCTCTTCTCCTGCGCCGCCGCCGCCTCCTCCTCCTCCCGCATCTCCCTCCTCGCCTCTCGCTGCCGGCCGCGCTTCGCCAAGGTGAGACTCCCCGCCTCTCCTCCGACTCATTCCACAACGCGTATTCGGCGGCCAGCGAATTGGCTTCTTTTTTTTATTTCCTTTCCCGACGCCCGATGATGGTTTATCCTAGTGTGGCTGTGCGCTTCGATTCGGATCCATCTGATCTCTTCCGGCCGCATTCTGGTTGCCCAGATCCATGCCACTTTCCTCGTTCATGTTAACGAGGAGATTTTCGGTTCGTTTTGCAGATGAACAAGGAGAGGCTTATGAAGATGGCCGGCGCCGTCCGCACCGGCGGGAAAGGCACCGTGCGCAGGTGGGTAAATCGCCTTTGTCGCGAAATGAAATGAATGTCTTGTTCTTTGCTTCTCGCCGTGTCGCGAAATGAAACAAATGTGCTTCATTTTGTTTGTTAGGAAGAAGAAGGCCGTCCACAAGACGGGGACCACTGACGACAAGAGGCTGCAGAGCACGCTCAAGAGAGTAGGTGTCAACACCATCCCCGCGATCGAGGAGGTCAACATCTTCAAGGATGATCTCGTCATCCAGTTCGTCAATCCCAAAGGTATAAGCATCCCTCCTGTTTTGCCTACCGTACCATGGAAATGCCAACTGCTTCTTGGTGTTAGATTACTTATCCATGTTCGATCCGACCTGTGCAGTGCAAGCTTCCATCGCCGCAAACACATGGGTGGTCAGTGGCTCCCCACAGACCAAGAGTATGTGACTTCTCCTTGTTACATTTGATCAGTTCGTTGTGCGAGTTCAATTCTTTTAAGATTAGCGGCTGTTCTGTTTCTCTTATACACTGCTGAGTTGCAGCAACCATCCCATGTAGAGCTCTGTATGACATCTGAATAATCCCATGTTCGTCTTTAGTTTTATCTCTGCACACTCTCTAGGAGATTTTATGCATTCAGCTGCAACATTGTAGGGTTTACTATATATGTTGATTGTGGGGTGGAGTGAATATTACGATGAACAAAACTAGCTTTTAGCAAGACTCAAATTGCCTTTTGATTACTTTATTTCAGTGATTGCCTGTTATTAGGGTGTTATTTTTATCTTCCTGACTTGTGATCACTGTTTGACTTGTCAGAGCTTCAAGATGTTCTTCCTGGGATCATTAACCAATTGGGTATGTCCTCTTCTTGGTTTGCTGTTATAAAAACTACTGTTGACTTGTGCTTCTGCACTTAATATTCAATTGATAGTTGTCTTAATTGGTCTGAATTGGCTTGTTTTTTCTGTTATAAGAACTATGTTATCAGTCTCATTTCATAGCTGCATGACTCCAATTTCTCTTTCCTGTCATGTATATATTCCAGAACCATGTTCACAAAATGTATATTCCAAACATGAGCTCTTTCGTATGGAGTATCTCCTAGCCTACCCATCATGTAAATCAGCGATGAAGCTATGCAAACATTAGTGTTTATCTATTTTTGATCTCCATAAAATGTAACTCTTATTTTTTTTTCTGGTTTTCTTGCTTTGTTTCCATTGCCAATTATCTGTTGGTTGCCATCAGCCTTTATTCCTGCTCATCACTGGACTTGTCTGATTATTGTCAAACTCATTCAGTTTATCTGCAGTTTGTCCAGTTACTGACAGTCAAATCTTTCTTGTAGGTCCTGACAACATGGAGCACCTAAAGAGGATTGCTGAAGAGATGCAGAAGCAGGTAGCTGCTGCAGGTGCCACTGCCCAGGCAAAGGAAGAGAACGATGATGATGTTCCAGAGCTTGTTCCGGGAGAGAATTTCGAAGAGGTAGCTCAGGAGACAAAAGCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013953