Os12g0508266

From RiceWiki
Revision as of 10:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0508266| Description = Histone deacetylase superfamily protein| Version = NM_001190042.1 GI:297729214 GeneID:9268136| Length = 2848 bp| De...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0508266

Description

Histone deacetylase superfamily protein

Version

NM_001190042.1 GI:297729214 GeneID:9268136

Length

2848 bp

Definition

Oryza sativa Japonica Group Os12g0508266, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19676732..19679579

Sequence Coding Region

19676867..19677047,19677569..19677694,19679193..19679383,19679472..19679537

Expression

GEO Profiles:Os12g0508266

Genome Context

<gbrowseImage1> name=NC_008405:19676732..19679579 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:19676732..19679579 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtcatcctcctccgccgccgcaggtgctggctccggcgagccctcgtcgacgtcccggccggggaaggagagggaggacggcggcgatggcggcggccgtaaggagggggagggaggcgcggattttgatctggccggagccgcggctgggtgggtggaggcgcggaccagctgccctcacctccccgccatgcccgcggccagcgccgacgacctcgcgcgcgtgccgccgcccgactcgccgtgctctagatgtcatcaccctgctgaaaactggttgtgcttgatctgtaaagatgtcctgtgcagccgttttatcaacaaacatatgttgtaccattatcaagatacaggacattgtcttgccctgagcttcagtgatctgtcaatctggtgttttgcctgcgactcctacctagacgttcaatccatcttagaactgcgtccagtttatgaagttgcacatctgatgaaatttggacagcggcctccatttcgatcacttgatgtactggatttgagcagtggacagaacggaggttcaccatcacagtcctaa</cdnaseq>

Protein Sequence

<aaseq>MSSSSSAAAGAGSGEPSSTSRPGKEREDGGDGGGRKEGEGGADF DLAGAAAGWVEARTSCPHLPAMPAASADDLARVPPPDSPCSRCHHPAENWLCLICKDV LCSRFINKHMLYHYQDTGHCLALSFSDLSIWCFACDSYLDVQSILELRPVYEVAHLMK FGQRPPFRSLDVLDLSSGQNGGSPSQS</aaseq>

Gene Sequence

<dnaseqindica>2533..2713#1886..2011#197..387#43..108#ttcagatcgtatctcctgcaccgccaaccaccgcctccgacgatgtcgtcatcctcctccgccgccgcaggtgctggctccggcgagccctcgtcgacgtcccggccggtaacactgcactgtgcctcactctctctctctctctctgtcggtggggtttcctcgtgttcatcggatgcatattgtgtcgtcgcaggggaaggagagggaggacggcggcgatggcggcggccgtaaggagggggagggaggcgcggattttgatctggccggagccgcggctgggtgggtggaggcgcggaccagctgccctcacctccccgccatgcccgcggccagcgccgacgacctcgcgcgcgtgccgccgcccgactcgccgtgctctaggttttggccctaacctaacctacctctcgaaaaccaactctgttttttagtattcggattgtttgtgttctttacgtggatagaatgttagtagtcgcctcgcagtatatcactaattcaacttttgcaaattgcaatgaatggtgagacggtttggttcaccaagtaaagaggaaagtttaatgctgcatgatcaagatgattatattgatcgtagacatacagtaggttgtggctctcaaaatctcaagatgttttgtaagacatatgcaacatttagtgtttggcggtagcagttgtttcttcttgggtttagcgctggaagaaattgtgacatacatgtgagtttctctcaccagcacaagagcacaactggatcaagtccagaacttggcattttgctcactgaatgaatagacactggcgatttgattggtcacgaggggtgggtgggaacatgctctgtgttgtgataacaatttttgcagtactttgagcctggaaatgtactcctggtgcctggggatgaagttttcttcacctacttatcaactggagtaattgataattgatgacaagattatttctcattgggtggtttttatgcaaatttgttagattagcagccaaaggtccttttttatgttaactggacatcatgttataattataaggtataaacttgttgagaggtgtctaagaggccaggcatgaggtcacatgtgtaccctaagaaatattgttgaaattaatcctaagagtatgcttgtagattagagtggctcattattctcctcaagttcaggatgtgacgaaggtaaaattaatcccaagtgccgatttgcagactagaaaggcttattattctcctcgagttcaggatgtgacaaaagtaccttaagagttccaaccgagagttgttgagatttctaaccaaagttccacctgatgattttcctttcctttatctgccactatattttcttgtttcaacatctggctcacactatcatgttgagctaattatgcatgcaaacctcatctatgataattggcccacaaaccagactgacctagttagtaggattaatgtttgctaaggttaggtgggttaattaagttgccagtacaaaaggtggtgcattaacttactccactggttgaccggatcacccctatagtgggttaactttttcatgggtttagagggttaaaaggctttggctgggttaacttagccctccttacccatgcgttggcagataaacttctaactaacccttattcccaaaagagattcaactttagtattgacgtctcccagtcatttaagttagcctgagtcaccctgtattttgcatgattcccaactgaaatatctgttattatgaatcttcgcttagtaactgaggacatatttgcatgattcccaatgaatgcatgtgctctgagtaaaatccaaggtattatcttcatttgtgagcgtttgtccgtgcagatgtcatcaccctgctgaaaactggttgtgcttgatctgtaaagatgtcctgtgcagccgttttatcaacaaacatatgttgtaccattatcaagatacaggacattgtcttgccctgagcttcaggtaatcatcaaaattgcatttgattaatttcctctttgatcacagtgattttttggtgatacgatcatgcatctgcactgtcagtagtcagtacagcgggtttaaagtgtcacctgaatttcaagtgttataacaatgaataattttacccgttactagactcttgaactgttccaatttattcctacatacatcatctttaaagaaaaccaaatttacagaaccagccaatagcccattactaagttataagttgtacatttgttctgtttaatgtctctagtagtaaacctagttatataattatacaaaaaaacaaagataattaaaatatgttttaaatatcagattgttatgttcatattaattcctatccattaagttcacttccagtcatatgctgcctctctcttgtatctcagctttcattgtgaacctgtacaatgtacatcttcctatgttatttcatttctacatgatctggttaatattacttagtacatgtatataacccattgcagtgatctgtcaatctggtgttttgcctgcgactcctacctagacgttcaatccatcttagaactgcgtccagtttatgaagttgcacatctgatgaaatttggacagcggcctccatttcgatcacttgatgtactggatttgagcagtggacagaacggaggttcaccatcacagtcctaatgctccatattctgttagatttcttttcattatggaagactagttaaacaatatgaacaaacagtagtctactatgtaaggtgtcacttgttaaacttcagtacgatatgccagatgaatgatcctgcttctcct</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0508266, RefSeq:Os12g0508266