BGIOSGA013980

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Revision as of 10:10, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013980| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013980, complete gene.| tag = OsI_143...")
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Gene Name

BGIOSGA013980

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013980, complete gene.

LocusTag

OsI_14396

Ensembl Transcript ID

BGIOSGA013980-TA

Ensembl Protein ID

BGIOSGA013980-PA

Length

4892

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:40534156..40539047

Sequence Coding Region

40534156..40534170,40534655..40534747,40534877..40534928,40535294..40535419,40535950..40536260
,40536392..40536635,40537373..40537623,40537718..40537924,40538193..40538360
,40538445..40538774,40538913..40539047

Genome Context

<gbrowseImage1> name=IndicaChromosome03:40534156..40539047 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:40534156..40539047 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCGCAACAAGGAAGCATTGGTTTTGCTATTGGATGTTGGCCCATCCATGCATGGCGTTCTGCAAGAAGTTGAGAATATCTGCTCCACCCTTGTGCATAAGAAGCTAGTTTATAATAGGAGTGATGAGATCGGTGTTGTCCTTTTTGGAACTAAAGAAACAAGCAACGAACTCGCCAAGGAGCTTGGGGGCTATAAGCATGTGGTGGTTGCTCGTGATATTAAAGTTGTTGATGAAGAAACAACAAATGCTCTGCAAAACCTTCCAAGGGGAACTTCCCCTGGAAAACAGCGTATGTGTCTAGTCACTGATGCACAACATCCATTAAGAGATCCACCCCAAGGGACAAAAAAGGATCAGGTGGACACTATTGCAGACCAGATGAAAAGACACGAAATCAAGATGGACTGCATTATTTTCAGAGAATCTGGAGTTCGTCACAATGCTGTAATGGATGAAAACGACCAATTATTATACCACTTCAGAGAGAGGTCAGTAACAAAGGTAGTTCATGTTGACAGCCCAACGTCACTCTTAGGTGCTCTCAGGACTAGAAATGTACTTCCAGTTACTGTCTTCAGGGGAGACTTGGAAGTGTGGGTCTATAAGAAAACATCTGAGGAGAAATTCCCCACTTTGAAGAAGTATTCTGATAAGGCTCCTGCAAGTGATAAATTTGCATCTCATGAAGTCAAAGTGGATTATGAGTACAAAAGTGTTCTAGAACCAGACACAGTCGTTCCACCAGATCAAAGAATTAAAGGATATCTTTATGGTCCACAAGTTGTTCCTATATCATCCGCTGAATGGGAAGCTGTCAAGTTCAAACCTGAGAAAGTTTTAAGACCAGATGTTAGTAACGGTGACACAGTCCACCTTTTTTACTTTAACAGGCACTATTTTATGAAAGATGTGTTCTCTTTTGTTCCGGAACCAGGAAACACAAAAGCAGTTGCTGCCGTTTCTGCCTTAGCTAGAGCAATGAGTGAAATGAACAAGGTTGCAATTTTACGATGCGTGTGGAGGCAAGGTCAAGGGAATGTTGCTTTGGGTGTATTGACACCAAACATATCATCAGCAAAAAATGTTCTGGATTCCTTTTACTTCAATATACTTCCATTTGCTGAGGACATCAGAGAGTTTCAGTTTCGGTCCTTCAGCAGCCTGCCATCATCATCTCAGCCTACCAAGGAACAGCAGGAAGCTGCAGATAACCTGGTAAAGATGTTAGATCTTGCACCACCTGGAAGGGAAGAGATCCTTAAGCCTGATTTCACTCCGAATCCCATGTTGGAGAGATTCTACAGGTACCTTGATCTCAAGTCAAAGCAGCCGGATGCAAATGTCCCACCCCTCGACAAATGTCTAAAGAAGATAACTGAACCTGATCCTGATGTCATTGATTATCAAGCACCGCTAATAAAAAAATTAGGCAATGTATTTGAGCTGAAGGAGAACCCCAAGAAAAAGAAAGCACGGACACAGGACAGATTGACTTATACTGGCGCAGACGATCAGGCTAAATTATTAGAAGAACCTTCTGCAGAGAAGGTTGGGGTTTCGGAAGCTTTATATCCTCCAAAAAAGAAGGCTGGGGAGATTGGCGATCATAATCCTGTTCAAGATTTTGAAGCCATGCTGACACAGAGATCTAGCTCAACGTGGGTTCAGACGGCAATTGAAGAGATGCAGAAGTACATAACCGCTTTAATACAGGATTCCTGTGATCGGGATAATCACCAAAAGGCACTGGAGTGCCTTGTTGCTTTACGGAAGGCCTGCATTATTGAACAGGAACCAAACGAATACAATGGATTCGTAACAAAGCTCTGTCAGAAATTTAGGCCGGCTGGTGATAAAATTTTTTTGCAGCTTCTTTCGTCCAAGAATGCTTCGCTTATAAGCAAAGAAGAAGCACCTGATAGGTAA</cdnaseq>

Protein Sequence

<aaseq>MARNKEALVLLLDVGPSMHGVLQEVENICSTLVHKKLVYNRSDEIGVVLFGTKETSNELAKELGGYKHVVVARDIKVVDEETTNALQNLPRGTSPGKQRMCLVTDAQHPLRDPPQGTKKDQVDTIADQMKRHEIKMDCIIFRESGVRHNAVMDENDQLLYHFRERSVTKVVHVDSPTSLLGALRTRNVLPVTVFRGDLEVWVYKKTSEEKFPTLKKYSDKAPASDKFASHEVKVDYEYKSVLEPDTVVPPDQRIKGYLYGPQVVPISSAEWEAVKFKPEKVLRPDVSNGDTVHLFYFNRHYFMKDVFSFVPEPGNTKAVAAVSALARAMSEMNKVAILRCVWRQGQGNVALGVLTPNISSAKNVLDSFYFNILPFAEDIREFQFRSFSSLPSSSQPTKEQQEAADNLVKMLDLAPPGREEILKPDFTPNPMLERFYRYLDLKSKQPDANVPPLDKCLKKITEPDPDVIDYQAPLIKKLGNVFELKENPKKKKARTQDRLTYTGADDQAKLLEEPSAEKVGVSEALYPPKKKAGEIGDHNPVQDFEAMLTQRSSSTWVQTAIEEMQKYITALIQDSCDRDNHQKALECLVALRKACIIEQEPNEYNGFVTKLCQKFRPAGDKIFLQLLSSKNASLISKEEAPDR</aaseq>

Gene Sequence

<dnaseqindica>1..15#500..592#722..773#1139..1264#1795..2105#2237..2480#3218..3468#3563..3769#4038..4205#4290..4619#4758..4892#ATGGCTCGCAACAAGGTAACCTCGCTCGCTCGTTCGCACCTCCTCGTCCTCCATGATTTGCACTCCAACTCCAACGCCACCCTTCCTAAACCCTATCTATACCCTCCTCCTCCGTCCCCTTCAAATAAAATAAAGGTTTTATCCCCCCATTCCTAGGGTTTTTGGGACAGTAATAATTTACTTCGCATTCGATTGTTGTGATTTAGTATCTATTTACATCCATCTTCACATTAACCTATCTGCATTCCTCTCCTTCCGCTGCACCATGCACTTGTTGTTAGGAAGTATCCTGATTTTACATTTTCGACTTGCACACCGTGATACCAAAATCTAATGAAAAAAAAAATAAAAACCAGAAATCAAACCCATGATACTGATCCCCCCCCCGTCCCTGTGATTCTGCGTGTTTGACAAAAATAAAAAGAGAAGAAAACCNATATGCCAGACCATTTCTGGTAGCACTTTTTATTGCCAATCAATTATATTTTTTTTAATGTAGGAAGCATTGGTTTTGCTATTGGATGTTGGCCCATCCATGCATGGCGTTCTGCAAGAAGTTGAGAATATCTGCTCCACCCTTGTGCATAAGAAGGCAAGCACACACTATTTCCATTTTAACTTCCCAGATGCAAATGCTACTACCTGGCCACCTGCAATTCATCATAACTTGTAACCAATCAGCCTCAAGCTAACCCCCCTGCCTTTTCCCCCCTCTCTGCAGCTAGTTTATAATAGGAGTGATGAGATCGGTGTTGTCCTTTTTGGAACTAAAGGTATTGTTGCAAGCAAATGTTTAACTAAAATTTTGTTTGCACTTCAAATGTTCTGTGTTGTTTTTTATTAGCTTCATTGAACAAGCATATATGATTCACAATGGAAAAGGATAAAGACATAGTTATATTAAACAAGTATGTGATTAACAACAGTGAAGGATCAGACAAGTTAATGTTTCTTCTCTCACACATCTAGTCTAGTTAAACACTTCTTCTCAAGTTGCTATGAACGATAGATCTACTTAGACACCAACGTTTGCATTGTTTTGCTGCAAATTTGAGAACCATGCATGAACATTGTTTGGGTCACATATTTCTTGCTTCAAAAGTTCCTTGGGCTGCTTGATTTATGTTTATATGTGCAGAAACAAGCAACGAACTCGCCAAGGAGCTTGGGGGCTATAAGCATGTGGTGGTTGCTCGTGATATTAAAGTTGTTGATGAAGAAACAACAAATGCTCTGCAAAACCTTCCAAGGGGAACTTCCCCTGGTGACTGTATCCACAAGTAGCACTGTATGCTGATGTTTGGTTTATAGTTATTGTTAACTAGACATCCGTTACTAGATTTGCCATAACTACTACTATCAGCACACGACACCTATTTGATCTTTCATTTTATGAGGCATTTTTTTTGTCTTGCCCTGCTGCCTGCATTTGCATGTTGCTAGATCATATCTATGGTGTAGGAGCTCAAATTAGTATTTCTCAGTCCATTATCCTTAAGTGTTTGCATTTTGGGGGACTTCTTTGTTGTGATACTGCCATCCATATTCAGCATCCGGCTCTTCATATAGTAGCTCCTGCTTATGGATTTGTGCTTGTTTCATCTTCTTTTTTTTCCCTGTCTTTAAGTCATATAGTTTCTTTGTTTTACATCATAATAGCGTTGTTTGAACTTGCTCTGTACTCTTCTCGAGTTTGATCGGAATCAGATACTGGAATTCCTTGACTAAGGCAAGTTTTGGATGCTATTGTTGTTGGTTTGGATATGCTGATAAGAAAATTTGGAAATATCAAAGGAAAACAGCGTATGTGTCTAGTCACTGATGCACAACATCCATTAAGAGATCCACCCCAAGGGACAAAAAAGGATCAGGTGGACACTATTGCAGACCAGATGAAAAGACACGAAATCAAGATGGACTGCATTATTTTCAGAGAATCTGGAGTTCGTCACAATGCTGTAATGGATGAAAACGACCAATTATTATACCACTTCAGAGAGAGGTCAGTAACAAAGGTAGTTCATGTTGACAGCCCAACGTCACTCTTAGGTGCTCTCAGGACTAGAAATGTACTTCCAGTTACTGTCTTCAGGGGAGACTTGGAAGTGAGCTCTAGCTTTAAAATAAAGGTGGGGTGTTGTTTTCTTAAATTCATGTAATGTTTTTTTTTTCAGTTAGAGAAATTTATATTAATTCTGGTTCAGTTTGCAATTTGGTCTGACGTCTTTGTGAACAGGTGTGGGTCTATAAGAAAACATCTGAGGAGAAATTCCCCACTTTGAAGAAGTATTCTGATAAGGCTCCTGCAAGTGATAAATTTGCATCTCATGAAGTCAAAGTGGATTATGAGTACAAAAGTGTTCTAGAACCAGACACAGTCGTTCCACCAGATCAAAGAATTAAAGGATATCTTTATGGTCCACAAGTTGTTCCTATATCATCCGCTGAATGGGAAGCTGTCAAGTTCAAACCTGAGAAAGGTGTGAAGCTTCTAGGTTTTACAGATAGATCCAGCATATCTCGGTAACCCATATCCTTCAACCTTTTATTTGGAATAAGATTATGTTCTTTGGACCTTGTGGTCTTGTATTCACTGATGCCATTTCTACATTTAATTTCATGATTATTTCAAGTTGTTTGAGGTAACTTGTTTGAAGACATAGCAAACCAATCCATGTGAACATTCAAGCATGAATAGTTAGTTTATGTACTTTATATCATTGGAGATTGAGCTGATACTATGAAACAAAACATTATAAAATAAATTCTTGCTCTAGCTGATTACCTGATCCTTGCAATTATGCCTAATATAAATGTTTAAAGAGTACATGTTTCGTGTTATGTGGTGTTGCATTTGAGTTTAAGCTGTAGGTTATCATTTATCATGTTATAAAACCCCTTGGGATGAATATGTTGCAAGCTGGAATTGGTGAATGGTTTATGCATGAAAACAATACATGAATGCAGTGCTCTGATTCGATCAATCAATCATAAATCCTTGCACGTAAAGTTTATGTTTTTATGTATAGATTACAGAACTCAGATCTGTACTGGGTCAAACTTCTGTTTATCCCTAAGGACTGCCAGGGGGTTCAGCTTATACAAAAGCTAATATAAAATTTCTTTTCTGAAAGTATCTCATTTCCAAAATTTGTAAAGATAAATTGCTGTAAACATGTTTATAAGTTTAATATTAAATGTCTTTACTATATTGCAGTTTTAAGACCAGATGTTAGTAACGGTGACACAGTCCACCTTTTTTACTTTAACAGGCACTATTTTATGAAAGATGTGTTCTCTTTTGTTCCGGAACCAGGAAACACAAAAGCAGTTGCTGCCGTTTCTGCCTTAGCTAGAGCAATGAGTGAAATGAACAAGGTTGCAATTTTACGATGCGTGTGGAGGCAAGGTCAAGGGAATGTTGCTTTGGGTGTATTGACACCAAACATATCATCAGCAAAAAATGTTGTATGTACTTTATTTACTCACACCTTATACCTGTAGGATTCGTCTGATGATTGCATATGTTCAAGCAATTCTTTTTTTTTCCTTTTCCCTGCAGCTGGATTCCTTTTACTTCAATATACTTCCATTTGCTGAGGACATCAGAGAGTTTCAGTTTCGGTCCTTCAGCAGCCTGCCATCATCATCTCAGCCTACCAAGGAACAGCAGGAAGCTGCAGATAACCTGGTAAAGATGTTAGATCTTGCACCACCTGGAAGGGAAGAGATCCTTAAGCCTGATTTCACTCCGAATCCCATGTTGGAGGTGCTATTCTTCCTTCAGAATATTGCTATTTATCAAAACCAATTTAGATATTCTGATATTTTTTTCTCATATTATATACCTTAAGCTATTTTTCCTCTTCTTTTCACTTTTTCATTGGAGTATGCTCTGCAAAGGTTCTTGTATGTATTTGTTTTGCTTCTAAGTTTACTAATAGGTTCTAGATCACTTGACATTTTTCTTTTAATGCTCCTTTTGTGCATATTCTTTATTCTGTTGACTAAGGTTCACTTGCCACTTCCCCCTTTAGAGATTCTACAGGTACCTTGATCTCAAGTCAAAGCAGCCGGATGCAAATGTCCCACCCCTCGACAAATGTCTAAAGAAGATAACTGAACCTGATCCTGATGTCATTGATTATCAAGCACCGCTAATAAAAAAATTAGGCAATGTATTTGAGCTGAAGGAGAACCCCAAGGTTAGAAATATTGCTAACGTATTTGTGTTATTGACTTGATACTGTAATTTTGGGGAACCATAAATCTGTTTGGACTGATCACAGAAAAAGAAAGCACGGACACAGGACAGATTGACTTATACTGGCGCAGACGATCAGGCTAAATTATTAGAAGAACCTTCTGCAGAGAAGGTTGGGGTTTCGGAAGCTTTATATCCTCCAAAAAAGAAGGCTGGGGAGATTGGCGATCATAATCCTGTTCAAGATTTTGAAGCCATGCTGACACAGAGATCTAGCTCAACGTGGGTTCAGACGGCAATTGAAGAGATGCAGAAGTACATAACCGCTTTAATACAGGATTCCTGTGATCGGGATAATCACCAAAAGGCACTGGAGTGCCTTGTTGCTTTACGGAAGGCCTGCATTATTGAACAGGTAATCTCTCCTATGGTTATTTTCATTTGATTGCATGGTAGTTAGATGTAATCCATGCCCCTTATTTTGCTGCGAGACCTCATGTATAGTTTAAACATGCTTGCTCAGTTGTAACTTAGGTGTTGTTTTCCATTATAGGAACCAAACGAATACAATGGATTCGTAACAAAGCTCTGTCAGAAATTTAGGCCGGCTGGTGATAAAATTTTTTTGCAGCTTCTTTCGTCCAAGAATGCTTCGCTTATAAGCAAAGAAGAAGCACCTGATAGGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013980

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA013980&oldid=58803"