BGIOSGA013991

From RiceWiki
Revision as of 10:11, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA013991| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA013991, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA013991

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA013991, complete gene.

LocusTag

OSJNBA0059G06.8

Ensembl Transcript ID

BGIOSGA013991-TA

Ensembl Protein ID

BGIOSGA013991-PA

Length

3812

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:40660952..40664763

Sequence Coding Region

40660952..40661194,40661718..40661823,40662070..40662130,40662215..40662510,40662591..40662730
,40662817..40662891,40662982..40663072,40663615..40663818,40664347..40664391
,40664678..40664763

Genome Context

<gbrowseImage1> name=IndicaChromosome03:40660952..40664763 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:40660952..40664763 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGACGGCGGCGGCGGCGGCGAGTCTGGTGTCCCTGCCCCTCCTCTCGGCCATCTTCGGCGCCGCCATCGCCCTCCTCTTCCTCTCCGGATACCTCCGCCGCAAGCGCGCCGCCATCGCCCATCTCCCCCCTTCCGCCACCGCCGCCGCCCCGGACCAGCCCAAGCAAGTTCGACCATCCAACCAGAACCAGCCTAAGAAGGGACACCAGCGATCTCACCACGCCGTCGATAAGGACGCTGCAAAAAAGCACCACCATCTTGATGTCAACACTTTGAGGGGGCATACTGATTCAGTCACAGCACTTCATTTCTCCGATGATGCCTGCAACCTGGCCACCGTATGTGCGGATGGAGCTGTCAGAGTATTCAGGGTTGATGATGTCTCAAGCAAGAGCTTTAAAATTCTGAGGATCAACTTGCCCGCTGGGGCACATCCTACAGCTATTGCTTTCTCACAAGGGGCATCATCAGTTGTTGTGGCAGCGCAAGCACTTTTAGGCTCATCTCTCTACATGTATGCGGATGTTGGTGCTCCTCCAGCTGGCGGAAACAAACAGCAGGGCAAGCTTTCTCCCCCTGAGATAAAGTGGGAACACCGTAAGATTCACGGCAAGGAGTCAGTGCTGAATCTTGCGGCAGCTCGTGCAACCTATGGGACTGGTGATGGCAGCACAATATTGATTTCTTGCTCTGAAGCAACTGATATCAAAATTTGGCATGGGAAAAGTGGAAAGGAGTTGGGAACAGTCGACACCAATCAATTGAAAAATAATATGGCTGATATATCCCCAAATGGCCGTTTCATAGCTGCTGCAGCTTTTACAGCTGATGTCAAGGTGTGGGAGATTGTTTATTCAAAGGATAGCTCTGTGAAGGAGGTCAATAAAGTTATGCAACTTAAGGGTCACAAAAGCGCTGTTACTTGCCTGTGTTTCGCTCTGAATTCTGAGCAGATTATTACAGCTTCCAAAGATGGTACAATTCGAGTATGGAACATTAATGTAAGGTACCATCTTGATGAAGACCCTAAAACCTTGAGAGTTTTGCCAATTCCTCTCCATGATTCAAAAGGTTCTGTTTGCCAGTATGATCACATGAGTGTATCTCCTGATGAGAAAGTTCTGGCCACGACAAGTGGATCAACGCTGCAATGGTTATGTGTGGAAACTGGTGCAGTTCTTGATACAGCTGAGAAAGCACATGAAGGTGATATAACTGGCATTGCCTGGGCTCCACGAACAATTCCAAATGGTGGAACTCCTGCTTTTGTTTTAGCGACTGCTGGAGTGGACAAAAAGGTGAAGCTGTGGTTAGCTCCTAAGGCTATTTCAACCTGA</cdnaseq>

Protein Sequence

<aaseq>MAAATAAAAASLVSLPLLSAIFGAAIALLFLSGYLRRKRAAIAHLPPSATAAAPDQPKQVRPSNQNQPKKGHQRSHHAVDKDAAKKHHHLDVNTLRGHTDSVTALHFSDDACNLATVCADGAVRVFRVDDVSSKSFKILRINLPAGAHPTAIAFSQGASSVVVAAQALLGSSLYMYADVGAPPAGGNKQQGKLSPPEIKWEHRKIHGKESVLNLAAARATYGTGDGSTILISCSEATDIKIWHGKSGKELGTVDTNQLKNNMADISPNGRFIAAAAFTADVKVWEIVYSKDSSVKEVNKVMQLKGHKSAVTCLCFALNSEQIITASKDGTIRVWNINVRYHLDEDPKTLRVLPIPLHDSKGSVCQYDHMSVSPDEKVLATTSGSTLQWLCVETGAVLDTAEKAHEGDITGIAWAPRTIPNGGTPAFVLATAGVDKKVKLWLAPKAIST</aaseq>

Gene Sequence

<dnaseqindica>1..243#767..872#1119..1179#1264..1559#1640..1779#1866..1940#2031..2121#2664..2867#3396..3440#3727..3812#ATGGCGGCGGCGACGGCGGCGGCGGCGGCGAGTCTGGTGTCCCTGCCCCTCCTCTCGGCCATCTTCGGCGCCGCCATCGCCCTCCTCTTCCTCTCCGGATACCTCCGCCGCAAGCGCGCCGCCATCGCCCATCTCCCCCCTTCCGCCACCGCCGCCGCCCCGGACCAGCCCAAGCAAGTTCGACCATCCAACCAGAACCAGCCTAAGAAGGGACACCAGCGATCTCACCACGCCGTCGATAAGGTCATTCCTCATGCCCTTATCTCAATCAAACTCAAAACTATTAGTGTATAACATTATCATATCATACTAGTAGTAGTAGTATTTAGCTCTCTCTTTCCGATATCAGATCCGATCCCTCCGTTCGTGCTGCCCTTGTCGAGTGTCGACCGTGCCAATTTGTTACTATTACTTACCACTACTAGTTAAGCTAGCTATTACCCGCTCCCAATCACTTGTAGCCTAGCCATATAACGTTTTATTACGCTCAATCTGCCACAATATTTCCTTTTTCTTTATTATAACTACCGCCTATATACTAGTACTATCTTCCACCCACGACTTTAAATGTAACCTCATTGCCGCTTGCAAATTCCGTAATCTGAGTTACCAAATTTGATATGTTTATCCATTATAAATTTTAGGCATTACACGCACAAGCCTCCTTACTATTTCATTCCTCTCCGAAAATGTCATATTACCGTATTTCTTTCTTGTCGGAAAATTTCATATAACCGTCATTGATCTCAACATGATTTTCTTTTAGGACGCTGCAAAAAAGCACCACCATCTTGATGTCAACACTTTGAGGGGGCATACTGATTCAGTCACAGCACTTCATTTCTCCGATGATGCCTGCAACCTGGCCACCGGTCAGCTTTTTTCCGCTCTACTTTCTCAACACCATATTACCACGAGGCAGGACCTCTCTTGTTTCGTGTCCTGCCTTTCTTATTTTCTCATCTTATATCATGCCACATGTTTTGTTGTTTCTCATTGCTAACAAATCAAAGTTGGCACCACACATACAGTTTACCATATTTCACTTCATCAACCAAGTGTGATTGCTACTCCAAATTCTAATGTCTACATCTATAACTTTCTGCTTCCTGTTGCAGTATGTGCGGATGGAGCTGTCAGAGTATTCAGGGTTGATGATGTCTCAAGCAAGAGCTTTAAGTAAGATTTTTTTTTAATTCTGCACGAATTATTCTTTCTTATTACTTCCTTATGCTGGAGTATGAGATTGTGGGGGTTTTGCAGAATTCTGAGGATCAACTTGCCCGCTGGGGCACATCCTACAGCTATTGCTTTCTCACAAGGGGCATCATCAGTTGTTGTGGCAGCGCAAGCACTTTTAGGCTCATCTCTCTACATGTATGCGGATGTTGGTGCTCCTCCAGCTGGCGGAAACAAACAGCAGGGCAAGCTTTCTCCCCCTGAGATAAAGTGGGAACACCGTAAGATTCACGGCAAGGAGTCAGTGCTGAATCTTGCGGCAGCTCGTGCAACCTATGGGACTGGTGATGGCAGCACAATATTGATTTCTTGCTCTGAAGGTATATGCCATTAAGTTGTGCACGCTACATGGATTTCCTTTTATCTCACACTAAGGTTGATATTTTGAGTTGTCATGCAGCAACTGATATCAAAATTTGGCATGGGAAAAGTGGAAAGGAGTTGGGAACAGTCGACACCAATCAATTGAAAAATAATATGGCTGATATATCCCCAAATGGCCGTTTCATAGCTGCTGCAGCTTTTACAGCTGATGTCAAGGTTAGTTTTGCTGTTATTTTGAAGAACTATAGCATATCCTTGCCAGGATATCCGGGCAATATAACTTTTCCCATTTATTTGAGTAGGTGTGGGAGATTGTTTATTCAAAGGATAGCTCTGTGAAGGAGGTCAATAAAGTTATGCAACTTAAGGGTCACAAAGTAAGACCCCCCCCTTGTCTTGTTGGACGTGTTACGAATTTATTTGCATGTTCTGAATCATATGAGAAGCTGACGATCTCCTTTTTTCAGAGCGCTGTTACTTGCCTGTGTTTCGCTCTGAATTCTGAGCAGATTATTACAGCTTCCAAAGATGGTACAATTCGAGTATGGAACATTAATGGTATGTTCTATTATTTTAATCAAAATGTTATGTTCTATGCCGCTTACCACCATATCCTTGATGGCTTGAAGCAATAAGTTGGGATTGGGTTCATAAATTGTAACAGTAAAAACTTGTTTACTTGAATTCTGAAAGTGATCACGGCAACAACTCCTATACTTTTGATTTTTTTTTTCATTTCCACTTATTGAATGCTCAGTATGCCAAAGTGCATCTATAGTTGTCTTTGTGCCTGACTTCACAAAAGTTGAGAGGACCTATCATTTTTTTTAAGTATCAAACCTGGTTACGCAATCCTCTGTAATCAAGTATTCAAGTTGCTTCCCAGCCATTCTCATGCCGTTCCTTTCTGTTAGATGCTGTGCTGATTGATCACTACCAAATGTTTATACAGAATGCACTTATGAATTTATACAAATGTCCTGATGAAAATAAATTTGTTCTTGGTATTGCCATTATAGAAGTCTATGCACACCTTGTACTGTTCTCTTTTTCTCAGATACTCTCCTTCCTCACAAGTTGATATTCTGTCAATTTTGTAGTAAGGTACCATCTTGATGAAGACCCTAAAACCTTGAGAGTTTTGCCAATTCCTCTCCATGATTCAAAAGGTTCTGTTTGCCAGTATGATCACATGAGTGTATCTCCTGATGAGAAAGTTCTGGCCACGACAAGTGGATCAACGCTGCAATGGTTATGTGTGGAAACTGGTGCAGTTCTTGATACAGCTGAGAAAGCACATGAAGGTATGTGCCCTCTTCTTTCTTGATTTGCCAGATTGGACACTGTTTTTACTACTAAATGGACCTAATAAATTGTTAAGGAGACGGCAGTAATTAAGATCTGAATCACAGAAGATTTGACACTGTTTATTTTTCTTGTGAACCTTTTTGTGTTTGAGTCACAACCTATCCTTTTCAACAATAGTCCCGAGTTGTTAAGAACTGACTACCATGGGCCAATACATCATACTCTGTACTCTGTGGTCAATGTTCATGTGTTATTTTCCTTTTCAATGATCCTGCAGACTACTTGTAGATCATGGCCATGAAGTCCATGGATTATACCAATACTTACTTGCATAACAGATGGTCTCAACTTTGTGCTGTCTTCAGAAATTTGATCGTAATTTAGTATTTAGAATTCAACTACTTTTCACTCGATAAAGTTATGCAGTGCTGATACATTAGGCTATAATTTACACCTTTTCCTGTTATGATCTTTGCTAGATATATGCTGCAATCTTACAGTGATATGTTTCTTTATGTAATCAGGTGATATAACTGGCATTGCCTGGGCTCCACGAACAATTCCAAATGGTAAGAAGTATGCAAACCGCGCGAACGAAATGTACATGTGAAATTCTTTGAAATCCAAAACGTTTTTCTTTGAAGCTTGTCCTTTTTAGCCATATGCAAATGTAATTTTTAGAGCTGGTGCACTTCATGTCTCATGTCAACGCATCACTTGTCGCCATTTACAAATATGTGTGTTGCTTTTTGCTGGAAGATTTCCAGGCTGAGGATACTAGGATAAAGCTATTGTTGGTCCGAGGGAGAAGTGTTTACAGATTCTAAACTGATCACTGATAATATTTTCTTTTAGGTGGAACTCCTGCTTTTGTTTTAGCGACTGCTGGAGTGGACAAAAAGGTGAAGCTGTGGTTAGCTCCTAAGGCTATTTCAACCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA013991

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA013991&oldid=58814"