BGIOSGA014006

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Revision as of 10:11, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014006| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014006, complete gene.| tag = OSIGBA0...")
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Gene Name

BGIOSGA014006

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014006, complete gene.

LocusTag

OSIGBA0135L04.3

Ensembl Transcript ID

BGIOSGA014006-TA

Ensembl Protein ID

BGIOSGA014006-PA

Length

3088

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:41229410..41232497

Sequence Coding Region

41229410..41230733,41230844..41230945,41231034..41231215,41231316..41231526,41231620..41231857
,41231954..41232104,41232189..41232497

Genome Context

<gbrowseImage1> name=IndicaChromosome03:41229410..41232497 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:41229410..41232497 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCTTACCTTGCAGTGTTTGTGTTCCTGCTTCTTGTTTGTTCGTCATGCAGAGCTGATGACAGGCTTACACCTGCAAGGCCGCTCTCCCCCGGCGACGAGCTCATCTCCAGCGGCGGCGTCTTCGCTCTCGGCTTCTTCTCCCCGACGAGCTCAACTTCGGACTTGTACGTCGGCGTGTGGTACAACCAGATCCCCGTGCGCACCTACGTGTGGGTCGCCAACCGCAACACCCCGATCAAGAAGAGCTCCTCCGTGAAGCTGGTCTTGACCAACGATTCCGACCTCGTGCTGTCCGACTCCAGTGGCGGCGGTGGCGGCGCCGTCTGGACGACGGCGAACAACGTCACCGCCGCCGGTGGTGGTGCTGGAGCAACGGCTGTGCTGCTCGACTCCGGCAACTTCGTCGTGCGGCTGCCGAACGGGTCTGAGGTATGGCGGAGCTTCGATCACCCGACGGACACCATCGTGCCCAACGTGAGTTTCTCGCTGAGCTACATGGCCAACAGCTTAGACCGCATCGTCGCGTGGAGGGGGCCCAACGACCCGTCCGCCGGCGACTTCACCATGGGCGGCGACTCCAGCTCGGACCTCCAGATCGTCGTCTGGAACGGGACGAGGCCGTACTGGCGACGAGCGGCGTGGACCGGCGCGTCCATCTTCGGCGTGATCCAGACCAACACCAGCTTCAAGCTGTACCAGACGATCGACGGCGACATGGCCGACGGCTACTCCTTCAAGCTGACCGTCGCCGACGGCTCGCCGCCGATGCGCATGACGCTGGACTACACCGGCGAGCTCACCTTCCAGAGCTGGGACGGCAACACGTCGTCGTGGACCGTCTTCACCCGGTTCCCCACCGGCTGCGACAAGTACGCCTCGTGCGGGCCATTCGGCTACTGCGACGGCATCGGCGCCACGGCGACTCCGACGTGCAAGTGCCTCGACGGTTTCGTCCCCGTCGACAGCAGCCATGACGTCTCGAGAGGTTGCCGGAGGAAGGACGAGGAGGTGGGATGCGTCAGCGGCGGCGGCGGCGATGGCTTGTTGACCATGCCGAGCATGAGGACACCGGACAAGTTCTTGTACGTGAGGAACAGAAGCTTCGACCAGTGCACCGCAGAGTGCAGCCGCAACTGCTCCTGCACGGCTTATGCTTATGCAATCCTGAATAATGCCGATGCGACGGAGGACCGGTCCAGGTGCTTGGTTTGGATGGGGGAGCTCGTCGACACGGGCAAGTTCAGCGATGGTGCCGGCGGCGAGAACCTCTACCTCCGGATTCCTGGCTCACGAGGCATGTATTTCGATAACCTTTACGTTAATAACAAGATGAAAAGTACTGTGCTGAAGATTGTACTGCCGGTTGCGGCTGGTCTTCTGCTGATACTTGGAGGCATATGTCTTGTACGCAAATCAAGAGGCAATCAACCAAGCAAGAAAGTTCAGAGCAAATATCCATTTCAACACATGAATGATTCAAACGAAGTTGGGAGCGAAAATGTAGAACTTTCTTCTGTTGACTTGGATTCTGTCCTCACTGCAACAAACAATTTCTCCGATTACAACTTGCTTGGAAAAGGAGGTTTTGGAAAAGTTTACAAGGGAGTTTTGGAGGGTGGCATAGAAGTTGCTGTCAAGAGGCTTAGCAAGGGTTCAGGGCAAGGTGTTGAGGAGTTCAGAAATGAAGTGGTTCTGATTGCTAAATTACAACACAGAAACTTGGTTAGGCTTCTTGGTTGCTGCATTCATGAAGACGAAAAGTTACTCATCTACGAATACTTACCAAACAGAAGCTTGGATGCCTTCCTTTTTGATGCTAACAGAAAAAACACGCTTGACTGGCCGACAAGGTTCAAGATAATTAAAGGAGTAGCAAGAGGTCTTCTTTATCTTCACCAGGATTCAAGATTAACAATAATCCATAGAGATCTAAAGACAAGCAACATTTTGTTGGACACAGAAATGAGTCCTAAAATATCAGATTTCGGCATGGCAAGGATCTTTGGTGGAAATGAGCAACAAGCTAATACCACCAGGGTTGTCGGCACATATGGTTACATGTCTCCTGAATATGCTTTGGATGGCTATTTTTCCGTCAAGTCTGACACCTATAGTTTTGGTGTCATACTATTGGAAGTTGTGAGTGGCTTAAAGATGAGTTCAGCCCATCTCAAAGTGGACTGTTCAAACCTTATAGCCTATGCATGGAGCTTATGGAAAGATGGAAATGCAAGGGATTTCGTAGACTCATCCATTGTGTTGAGCTGTCCACTTCATGAAGTTCTACGATGTATACATTTAGGACTCCTTTGCATTCAAGATCAACCAAGTGATAGGCCACTGATGTCATCCATTGTGTTCATGCTGGAGAACGAAATTGCCGTGCTTCCTGCTCCAGAGGAGCCTATATATTTCACAAGGAGGGAGTACGGGACAGACGAAGACACGAGAGATAGCATGAGATCAAGATCTCTGAACCACATGAGTATAACAGCAGAAGATGGGCGTTAA</cdnaseq>

Protein Sequence

<aaseq>MAAYLAVFVFLLLVCSSCRADDRLTPARPLSPGDELISSGGVFALGFFSPTSSTSDLYVGVWYNQIPVRTYVWVANRNTPIKKSSSVKLVLTNDSDLVLSDSSGGGGGAVWTTANNVTAAGGGAGATAVLLDSGNFVVRLPNGSEVWRSFDHPTDTIVPNVSFSLSYMANSLDRIVAWRGPNDPSAGDFTMGGDSSSDLQIVVWNGTRPYWRRAAWTGASIFGVIQTNTSFKLYQTIDGDMADGYSFKLTVADGSPPMRMTLDYTGELTFQSWDGNTSSWTVFTRFPTGCDKYASCGPFGYCDGIGATATPTCKCLDGFVPVDSSHDVSRGCRRKDEEVGCVSGGGGDGLLTMPSMRTPDKFLYVRNRSFDQCTAECSRNCSCTAYAYAILNNADATEDRSRCLVWMGELVDTGKFSDGAGGENLYLRIPGSRGMYFDNLYVNNKMKSTVLKIVLPVAAGLLLILGGICLVRKSRGNQPSKKVQSKYPFQHMNDSNEVGSENVELSSVDLDSVLTATNNFSDYNLLGKGGFGKVYKGVLEGGIEVAVKRLSKGSGQGVEEFRNEVVLIAKLQHRNLVRLLGCCIHEDEKLLIYEYLPNRSLDAFLFDANRKNTLDWPTRFKIIKGVARGLLYLHQDSRLTIIHRDLKTSNILLDTEMSPKISDFGMARIFGGNEQQANTTRVVGTYGYMSPEYALDGYFSVKSDTYSFGVILLEVVSGLKMSSAHLKVDCSNLIAYAWSLWKDGNARDFVDSSIVLSCPLHEVLRCIHLGLLCIQDQPSDRPLMSSIVFMLENEIAVLPAPEEPIYFTRREYGTDEDTRDSMRSRSLNHMSITAEDGR</aaseq>

Gene Sequence

<dnaseqindica>1..1324#1435..1536#1625..1806#1907..2117#2211..2448#2545..2695#2780..3088#ATGGCGGCTTACCTTGCAGTGTTTGTGTTCCTGCTTCTTGTTTGTTCGTCATGCAGAGCTGATGACAGGCTTACACCTGCAAGGCCGCTCTCCCCCGGCGACGAGCTCATCTCCAGCGGCGGCGTCTTCGCTCTCGGCTTCTTCTCCCCGACGAGCTCAACTTCGGACTTGTACGTCGGCGTGTGGTACAACCAGATCCCCGTGCGCACCTACGTGTGGGTCGCCAACCGCAACACCCCGATCAAGAAGAGCTCCTCCGTGAAGCTGGTCTTGACCAACGATTCCGACCTCGTGCTGTCCGACTCCAGTGGCGGCGGTGGCGGCGCCGTCTGGACGACGGCGAACAACGTCACCGCCGCCGGTGGTGGTGCTGGAGCAACGGCTGTGCTGCTCGACTCCGGCAACTTCGTCGTGCGGCTGCCGAACGGGTCTGAGGTATGGCGGAGCTTCGATCACCCGACGGACACCATCGTGCCCAACGTGAGTTTCTCGCTGAGCTACATGGCCAACAGCTTAGACCGCATCGTCGCGTGGAGGGGGCCCAACGACCCGTCCGCCGGCGACTTCACCATGGGCGGCGACTCCAGCTCGGACCTCCAGATCGTCGTCTGGAACGGGACGAGGCCGTACTGGCGACGAGCGGCGTGGACCGGCGCGTCCATCTTCGGCGTGATCCAGACCAACACCAGCTTCAAGCTGTACCAGACGATCGACGGCGACATGGCCGACGGCTACTCCTTCAAGCTGACCGTCGCCGACGGCTCGCCGCCGATGCGCATGACGCTGGACTACACCGGCGAGCTCACCTTCCAGAGCTGGGACGGCAACACGTCGTCGTGGACCGTCTTCACCCGGTTCCCCACCGGCTGCGACAAGTACGCCTCGTGCGGGCCATTCGGCTACTGCGACGGCATCGGCGCCACGGCGACTCCGACGTGCAAGTGCCTCGACGGTTTCGTCCCCGTCGACAGCAGCCATGACGTCTCGAGAGGTTGCCGGAGGAAGGACGAGGAGGTGGGATGCGTCAGCGGCGGCGGCGGCGATGGCTTGTTGACCATGCCGAGCATGAGGACACCGGACAAGTTCTTGTACGTGAGGAACAGAAGCTTCGACCAGTGCACCGCAGAGTGCAGCCGCAACTGCTCCTGCACGGCTTATGCTTATGCAATCCTGAATAATGCCGATGCGACGGAGGACCGGTCCAGGTGCTTGGTTTGGATGGGGGAGCTCGTCGACACGGGCAAGTTCAGCGATGGTGCCGGCGGCGAGAACCTCTACCTCCGGATTCCTGGCTCACGAGGCATGTATTTCGATAACCTTTACGGTGTTCTCTACTGGTTGTAGAAATGATTTCTTGGATATTTTCTTTATTCTGGACTGTATAATAATATGATTAATTCGCTTGATATGTAATGTGATTAATGATTTCTGCAGTTAATAACAAGATGAAAAGTACTGTGCTGAAGATTGTACTGCCGGTTGCGGCTGGTCTTCTGCTGATACTTGGAGGCATATGTCTTGTACGCAAATCAAGAGGTAGAGTGTAAAAAACATTACTTTGCTCTTTGATGAGATATTTCACTTGTATGAAACAATAATGATGATACAGAGGCGTTCCTTTCAGGCAATCAACCAAGCAAGAAAGTTCAGAGCAAATATCCATTTCAACACATGAATGATTCAAACGAAGTTGGGAGCGAAAATGTAGAACTTTCTTCTGTTGACTTGGATTCTGTCCTCACTGCAACAAACAATTTCTCCGATTACAACTTGCTTGGAAAAGGAGGTTTTGGAAAAGTTTACAAGGTAATAATGATAAGTCTTAGCTTGATTTTTGAGTTAAAGATATATGATATGTTATAGCTTATCTCTTGTTTAATCAAAGAATGGTGCAATATATATTTAGGGAGTTTTGGAGGGTGGCATAGAAGTTGCTGTCAAGAGGCTTAGCAAGGGTTCAGGGCAAGGTGTTGAGGAGTTCAGAAATGAAGTGGTTCTGATTGCTAAATTACAACACAGAAACTTGGTTAGGCTTCTTGGTTGCTGCATTCATGAAGACGAAAAGTTACTCATCTACGAATACTTACCAAACAGAAGCTTGGATGCCTTCCTTTTTGGTACGTTATTTCTGACTTATGATCTCTGACAATAAACTGAAGGGATATTGATGATGTCTGACAATAAATTTCATTCCACATTGATCTTGGAAGATGCTAACAGAAAAAACACGCTTGACTGGCCGACAAGGTTCAAGATAATTAAAGGAGTAGCAAGAGGTCTTCTTTATCTTCACCAGGATTCAAGATTAACAATAATCCATAGAGATCTAAAGACAAGCAACATTTTGTTGGACACAGAAATGAGTCCTAAAATATCAGATTTCGGCATGGCAAGGATCTTTGGTGGAAATGAGCAACAAGCTAATACCACCAGGGTTGTCGGCACATAGTAAGCAGTTCATACTTCATATATGAGCTAATGTTCAACGTGCAAACTATTTACCCTAATTCAAACTGCATATTGTTTCCTGAATTATTTAAACAGTGGTTACATGTCTCCTGAATATGCTTTGGATGGCTATTTTTCCGTCAAGTCTGACACCTATAGTTTTGGTGTCATACTATTGGAAGTTGTGAGTGGCTTAAAGATGAGTTCAGCCCATCTCAAAGTGGACTGTTCAAACCTTATAGCCTATGTAAGTATAGCACAACGCTCAAATTTCTGCAAGTCAAACTAAATGTAATGAGTTGAGATATCATAACTTGATTTGTTTCTTCAGGCATGGAGCTTATGGAAAGATGGAAATGCAAGGGATTTCGTAGACTCATCCATTGTGTTGAGCTGTCCACTTCATGAAGTTCTACGATGTATACATTTAGGACTCCTTTGCATTCAAGATCAACCAAGTGATAGGCCACTGATGTCATCCATTGTGTTCATGCTGGAGAACGAAATTGCCGTGCTTCCTGCTCCAGAGGAGCCTATATATTTCACAAGGAGGGAGTACGGGACAGACGAAGACACGAGAGATAGCATGAGATCAAGATCTCTGAACCACATGAGTATAACAGCAGAAGATGGGCGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014006

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