Os12g0509200

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Revision as of 10:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0509200| Description = Conserved hypothetical protein| Version = NM_001073386.1 GI:115488733 GeneID:4352311| Length = 2869 bp| Definition ...")
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Gene Name

Os12g0509200

Description

Conserved hypothetical protein

Version

NM_001073386.1 GI:115488733 GeneID:4352311

Length

2869 bp

Definition

Oryza sativa Japonica Group Os12g0509200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19753716..19756584

Sequence Coding Region

19753813..19754006,19754120..19754233,19754856..19755891

Expression

GEO Profiles:Os12g0509200

Genome Context

<gbrowseImage1> name=NC_008405:19753716..19756584 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:19753716..19756584 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaacatgaacataccttgcaagtgtgccacacggcatgtcctaatcacaactttccgaattgaatgtcagctcgataaggatgattttgaacctaaagtcctcgaggtcctacactccacctgccgtagaattggtatgcttcgaagcaaagcacccgggcatgagtcctatgacagattgtgtttcatacaggaatatctggacgattcatctgagattgatccttcgatagctttgatgatgggagcaaggtccagctactccgaagctgatgaagttgacccaaagatgctgctttgttgtagggagtttttgagcataagagaacttagttcatgtgtagttcttgaagaatgtagggtaatggtcaaatcagaattctatttcatttgtcagtcgggtcaacacacatatttatataagatctctactgcaagaggaaagttgacatgccatgaaaccattctagaagcagaacactctttagagacaattaggaatggggatgtcggaatagatgatccgcctgcatggcattttgtgaactatggagtgaagctttatgtgatcccctctgttccacagtacaatcactattatgaggtggatgtctacagaaactcctctctcatcttggaaagcaaacggcctagtatttgtttctctgcagtttgtcgagttgggcaacggattgtggcattgggtgatactttggaggccgtgtatattcttgatctccaaaatgtggagtgggtcttttgcaagacatcgtcgacgtttttagacttaagaaaggaaatcaagatttctggatttgtagaccttggtaatgattcaatgatgatttcagaagttgatgcatgtgagtgttttattctagatcttaagaagaagcaatggtttgttgtagagccgcctaatggtgacatctggcagtactgtgttggtctgttgagcggaacatgtatgttcattgagggctttatatatacctgctcagatggggaaatggttgcatatgagttgatcgagaaagatggtttataccattgggatgcacctgtcataatgaggttaccatggaagaagttctctaacaggaaatttatggcgttctgtccaatttgtaaagatgtcatacatgatgacattgcattcagtattgtggaggcgcgtccgtttggttcaagtcatacagtagctactacaatagtacaagtgaagcttcaggaaacgacacgaggatccaaaagaccagttggaattgctcatgcagatatttcaacgtcatcgattgaacaaaatggatggatcttatccaactacgcatttactttataa</cdnaseq>

Protein Sequence

<aaseq>MNMNIPCKCATRHVLITTFRIECQLDKDDFEPKVLEVLHSTCRR IGMLRSKAPGHESYDRLCFIQEYLDDSSEIDPSIALMMGARSSYSEADEVDPKMLLCC REFLSIRELSSCVVLEECRVMVKSEFYFICQSGQHTYLYKISTARGKLTCHETILEAE HSLETIRNGDVGIDDPPAWHFVNYGVKLYVIPSVPQYNHYYEVDVYRNSSLILESKRP SICFSAVCRVGQRIVALGDTLEAVYILDLQNVEWVFCKTSSTFLDLRKEIKISGFVDL GNDSMMISEVDACECFILDLKKKQWFVVEPPNGDIWQYCVGLLSGTCMFIEGFIYTCS DGEMVAYELIEKDGLYHWDAPVIMRLPWKKFSNRKFMAFCPICKDVIHDDIAFSIVEA RPFGSSHTVATTIVQVKLQETTRGSKRPVGIAHADISTSSIEQNGWILSNYAFTL</aaseq>

Gene Sequence

<dnaseqindica>98..291#405..518#1141..2176#gaagcctcctgaggtgatcgacgctatctgtccctaccggaaggaagggtatggattcgtcattcacctcaggaatgacatactctgtgccgtttggatgaacatgaacataccttgcaagtgtgccacacggcatgtcctaatcacaactttccgaattgaatgtcagctcgataaggatgattttgaacctaaagtcctcgaggtcctacactccacctgccgtagaattggtatgcttcgaagcaaagcacccgggcatgagtcctatgacagattgtgtttcatacagtaagtcactaatatgttgttttgttttgctcttatgtttcttacgctctattcctttcaatggcataaatcattttttatgttgttcaactaaaattgttttggtaaattagggaatatctggacgattcatctgagattgatccttcgatagctttgatgatgggagcaaggtccagctactccgaagctgatgaagttgacccaaagatgctgctttgttgtaggtacagtttcgttcaatgattctattttgtttttgtttttggtagtgaaatgaaattgtttcctaagccattttgttttatcaaacaattcttctataagtaagaaatttattcatcaatgctcttgctgtctttctgttaacacatttataataatgccatcataggaacttagttcattataagctacaataatgccatcataggaacctagtttattactcccaccgtccccaaatataagggattttggtttgatgggacacatcctgtccagattggtagtactaggatgtgtctcatccaaccaaaatcccttatatttcgggatggagggagtataaactctaaaagtcagatgtgatccaccgcgacaactacgatatattttcactgcattggtgtcatatttttaaattattgtttactgtccctaaaacataagaaaccactatgtggatgtcataaatttatttgtcgttccaatttctcgaagttttaaatatgacttgtgttgcaattattccattaatccttctaatttccaaagctttaatcactttgtggtcattatataatcataatcatttatatcctaaacaatagcaacctttaaatgcagggagtttttgagcataagagaacttagttcatgtgtagttcttgaagaatgtagggtaatggtcaaatcagaattctatttcatttgtcagtcgggtcaacacacatatttatataagatctctactgcaagaggaaagttgacatgccatgaaaccattctagaagcagaacactctttagagacaattaggaatggggatgtcggaatagatgatccgcctgcatggcattttgtgaactatggagtgaagctttatgtgatcccctctgttccacagtacaatcactattatgaggtggatgtctacagaaactcctctctcatcttggaaagcaaacggcctagtatttgtttctctgcagtttgtcgagttgggcaacggattgtggcattgggtgatactttggaggccgtgtatattcttgatctccaaaatgtggagtgggtcttttgcaagacatcgtcgacgtttttagacttaagaaaggaaatcaagatttctggatttgtagaccttggtaatgattcaatgatgatttcagaagttgatgcatgtgagtgttttattctagatcttaagaagaagcaatggtttgttgtagagccgcctaatggtgacatctggcagtactgtgttggtctgttgagcggaacatgtatgttcattgagggctttatatatacctgctcagatggggaaatggttgcatatgagttgatcgagaaagatggtttataccattgggatgcacctgtcataatgaggttaccatggaagaagttctctaacaggaaatttatggcgttctgtccaatttgtaaagatgtcatacatgatgacattgcattcagtattgtggaggcgcgtccgtttggttcaagtcatacagtagctactacaatagtacaagtgaagcttcaggaaacgacacgaggatccaaaagaccagttggaattgctcatgcagatatttcaacgtcatcgattgaacaaaatggatggatcttatccaactacgcatttactttataagcaactgtaaggtttttgcaacagtgaaatctatgatacttgattgcttttctattctgttttatctgatttaacatatgcattaatatatttgcagttagaagtctctcctgctgggactctcctgctcgagcatggagacgggatgctgctgacgacgacggtggacatgtctggggtgacggtacacgtgagcccatccagcttgagacgacgaggaaggggactgatgagtggtgtcacggcgccggctagagggtcgatgaagcaggcctcgtgggaggcgccgacggcgaggaggcggccgctggcgccgatcaccatggtctgcgcggggccggcggcgaggctcggcggccaggggcagtcgcgggtggtgccggagaagacgaagcgactgtgaaggagcgggtcgtggcggtggtgcggggccagaagccatggcaggaacgcgttcggcttcgtcgccgctggtgacgaagcccctgtctcccgccatgtgcggcacacgcccaggaaccgcacgaaatcgaccacgtcgtcgagctgcgctgcgatcatgccgagcaagtcgtccggcacgctgatggaccacatccccgtcgccgcggaggcgtcgtcgtcgtcgtcgtcgccgccgcggcctgcaattgcaacggttgaattctcgcacgcgcgcgggatgaatggatg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0509200, RefSeq:Os12g0509200