BGIOSGA014013

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Revision as of 10:11, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014013| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014013, complete gene.| tag = OS04G02...")
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Gene Name

BGIOSGA014013

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014013, complete gene.

LocusTag

OS04G0226800

Ensembl Transcript ID

BGIOSGA014013-TA

Ensembl Protein ID

BGIOSGA014013-PA

Length

3954

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:41400006..41403959

Sequence Coding Region

41400006..41400247,41400773..41403504,41403595..41403959

Genome Context

<gbrowseImage1> name=IndicaChromosome03:41400006..41403959 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:41400006..41403959 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGGCTAGGCGCGGGCGGCGACTGGCGGCGTTGCGGCTCCACAGGGCGGCACTGGCTTGGGAGAAGCACAGGGAGATGTCTGGCGGCGCGGGGGTGTCTCATCCGCCGCGACCGGCAGCGGCAGGGAAGGGAGGCGCGTGGGTGGAGGATGCCAGGAGGGCAGGCGGGAGGCTGGTGGTGCGGCGACCAGGGCGGCTGCGTGCGGCGTCCGCGACGAACTGGAGGCTGGCGCCGACGAGCCTCCTCATCTTTCTATCCTGCAACACAATAACACCCTCATCAGCACAGCCCAGCAACAGATCAGAGACCGATTTACAAGCTCTACTCTGCTTCAAGCAAAGCATAACCAACGACCCCACCGGTGCTTTCAGCTCATGGAGCATATCCCTACACTTCTGCAGATGGAATGGTGTCACATGTGGCAGGACATCTCCAGCTCATGTTGTCTCCATAAACCTTACCTCCATGAAGCTCAGTGGAGTTCTGCCAGCTTGCATGGGCAACCTCACCTCGTTGCAAACTCTGGTTCTTGACAGAAACAATCTTGAAGGTACCATCCCTGAATCCTTAGCAAGAAGTTTATCACTCATTGAGCTAAATCTTTCGCGTAACTTCCTATCTGGACAGATCCCTGCTAGTTTGTTCAATGGCTCATCCAAACTTGTCACTGTTGATCTCCAAATGAATTCTTTTTCTGGCATAATTCCCCCTCCCCATAAGATGGCCACTCTTCGATTTCTTGGTCTTACTGGAAACTTGCTTTCTGGAAGAATACCAGTATCCCTAGCAAATATTTCATCTCTAAGTTCCATACTGCTAGGACAAAACAATTTATCAGGACCAATTCCAGAATCCTTGAGTCAAATCGCAAACCTGAATAAGCTAGATCTGAGTGGAAACAGATTATCAGGGTTTGTCCCAGTCACACTGTACAATAAGTCGTCGCTTGAATTTTTTGGTATAGGAAACAACAGTCTTATTGGAAAGATACCTCCTGACATTGGTCACACACTTCCAAATCTCAAATCGTTGGTCATGTCTCTGAATAGGTTTGATGGATCAATTCCAACTTCCCTGGCCAATGCATCAAACCTACAAATGCTTGATCTCTCTAGCAATTTGCTAAGTGGGCTTGTACCAGCATTAGGATCCTTGATAAACTTGAATAAACTTTTCCTAGGAAATAACAGGCTAGAAGCTGAAGACTGGTCATTCTTTACTGCTCTGACAAATTGTACACAACTGTTACAATTGTCGATGGAAGGGAATAACCTGAATGGTAGCCTGCCGAAATCAGTTGGCAACCTTTCAACGAATTTTGAGTGGTTTAAATTTGGGGGCAACCAAATTTCCGGAAGAATTCCAGATGAGTTAGGGAACCTCGTTAATCTAACTTTACTCGACATTAACTCGAACATGCTGTCAGGAGAAATTCCCTTGACTATTGGGAACTTGAGGAAATTGTTTATACTGAATCTATCCATGAATAAATTGTCTGGACAAATCCCATCTACAATTGGTAATCTTTCTCAACTTGGCAAGCTTTATCTCGATAATAATAATTTATCTGGTAAAATACCAGCAAGAATAGGGCAGTGCAAAATGCTAAATATGCTAAACTTATCAGTGAACAGCCTAGATGGATCCATACCAGATGAACTTGTCAGTATGTCTTCTCTTTCCTTGGGTTTGGATCTGTCCAACAACAAACTTTCAGGCTCAATACCACAAGAAGTTGGTACTCTGAGCAATCTTGCCCTCCTAAATTTTTCCAACAACCAGTTGTCAGGCCAAATTCCTTCTTCACTCGGCCAGTGTGTTGTTCTTTTGTCCCTAAACATGGAAGGCAACAATCTCATTGGGAATATACCACCGGCATTAACTTCACTGCATGCCATTCAACGAATTGATCTCTCTGAGAACAACTTATCCAGTGAAGTTCCTGTGTTCTTCGAGAACTTTATCAGCCTAGCCCACCTAAATTTATCATACAACTATTTTGAAGGGCCAATTCCCATCAGCGGTATCTTTCAAAGACCAAATTCTGTAAGCCTGGAAGGAAATAAAGGGTTATGTGCGAATATTCACATATTGAACTTGCCGATATGCCCCAGCTCACCAGCTAAAACGAAGAACAATAAACGACTGCTACTGAAAGTTATTCCCTCCATTACTATTGCTTTATTCTCAGCTCTATGCTTAATTTTCGCTCTTGTCACTCTATGGAAGAGAAGGATGATTTCGTTCTCATGGTTCAATTATGGGCATAGACAGTGCACTGATGTGCTCAGACAATTCAGTGGCATGCTCAACATGCTTTGTTCGTCCAATCCAAAGAGAAGGGAAGTGCCAACAACTCCAATCAACAATGAGACGCTGAAGAAGGTCTCATATGGTGACATTCTTAAAGCTACTAATTGGTTTTCTTCAGTCCATACAATAAGTTCAACCCATACTGGATCAGTTTATGTTGGTAGGTTTAAGTCTGACAAAAGCCTAGTTGCTATCAAAGTATTCAACTTGAATCAGCCTGGTGCATATGAGAGTTACTTTATTGAGTGTGAAGTGCTAAGAAGCACCCGCCATAGGAATCTAATGAGACCTTTGACCCTATGTTCAACATTGGACAAAGAAAACCATGAATTCAAAGCGCTAATCTTCAAGTTCATGGTTAATGGTAGCCTTGAAAGATGGTTGTACTCTGAGCAGCATTATGGAATCAAAGATAGAGTGCTATGCTTAGGTCAGAGAATATGCATAGCAACTGAGGTGGCTTCTGCTCTGGATTATATCCACAACCATCTAACACCCCCTTTGGTCCATTGTGATGTGAAGCCGAGCAATATCCTCTTAGACGATGACATGACCGCGCGTCTAGGTGATTTTGGGTCAGCAAAGTTTCTATTTCCAGATCTGGTCAGTCTGGAAAGCTTAGCTGATATAGGAGGAACTATTGGGTACATTGCACCAGAGTATGGAATGGGCTGTCAAATCTCAACAGGAGGCGATGTGTATAGTTTTGGAGTGCTACTTCTGGAGATGCTTACAGGAAAGCAGCCAACTGATGATACATTTGCGGATGGAGTTAGCATTCATAACTTTATTGACTCCATGTTCCCAGATAGAGTTGCAGAGATTCTAGATCCCTATATGATGCACGAGGAGCACCAAGTGTATCCAGCAGAATGGTTTGAGGCCTGTATTAAGCCGTTAGTTGCACTTGGCCTGTCATGTTCCATGGTATCTCCGAAAGACAGACCTGGAATGCAAGATGTCTGTGCAAAACTTTGTGCTGTCAAAGAAACTTTTCTGCAGTTCGGTGATTTCAGTTTATGA</cdnaseq>

Protein Sequence

<aaseq>MPARRGRRLAALRLHRAALAWEKHREMSGGAGVSHPPRPAAAGKGGAWVEDARRAGGRLVVRRPGRLRAASATNWRLAPTSLLIFLSCNTITPSSAQPSNRSETDLQALLCFKQSITNDPTGAFSSWSISLHFCRWNGVTCGRTSPAHVVSINLTSMKLSGVLPACMGNLTSLQTLVLDRNNLEGTIPESLARSLSLIELNLSRNFLSGQIPASLFNGSSKLVTVDLQMNSFSGIIPPPHKMATLRFLGLTGNLLSGRIPVSLANISSLSSILLGQNNLSGPIPESLSQIANLNKLDLSGNRLSGFVPVTLYNKSSLEFFGIGNNSLIGKIPPDIGHTLPNLKSLVMSLNRFDGSIPTSLANASNLQMLDLSSNLLSGLVPALGSLINLNKLFLGNNRLEAEDWSFFTALTNCTQLLQLSMEGNNLNGSLPKSVGNLSTNFEWFKFGGNQISGRIPDELGNLVNLTLLDINSNMLSGEIPLTIGNLRKLFILNLSMNKLSGQIPSTIGNLSQLGKLYLDNNNLSGKIPARIGQCKMLNMLNLSVNSLDGSIPDELVSMSSLSLGLDLSNNKLSGSIPQEVGTLSNLALLNFSNNQLSGQIPSSLGQCVVLLSLNMEGNNLIGNIPPALTSLHAIQRIDLSENNLSSEVPVFFENFISLAHLNLSYNYFEGPIPISGIFQRPNSVSLEGNKGLCANIHILNLPICPSSPAKTKNNKRLLLKVIPSITIALFSALCLIFALVTLWKRRMISFSWFNYGHRQCTDVLRQFSGMLNMLCSSNPKRREVPTTPINNETLKKVSYGDILKATNWFSSVHTISSTHTGSVYVGRFKSDKSLVAIKVFNLNQPGAYESYFIECEVLRSTRHRNLMRPLTLCSTLDKENHEFKALIFKFMVNGSLERWLYSEQHYGIKDRVLCLGQRICIATEVASALDYIHNHLTPPLVHCDVKPSNILLDDDMTARLGDFGSAKFLFPDLVSLESLADIGGTIGYIAPEYGMGCQISTGGDVYSFGVLLLEMLTGKQPTDDTFADGVSIHNFIDSMFPDRVAEILDPYMMHEEHQVYPAEWFEACIKPLVALGLSCSMVSPKDRPGMQDVCAKLCAVKETFLQFGDFSL</aaseq>

Gene Sequence

<dnaseqindica>1..242#768..3499#3590..3954#ATGCCGGCTAGGCGCGGGCGGCGACTGGCGGCGTTGCGGCTCCACAGGGCGGCACTGGCTTGGGAGAAGCACAGGGAGATGTCTGGCGGCGCGGGGGTGTCTCATCCGCCGCGACCGGCAGCGGCAGGGAAGGGAGGCGCGTGGGTGGAGGATGCCAGGAGGGCAGGCGGGAGGCTGGTGGTGCGGCGACCAGGGCGGCTGCGTGCGGCGTCCGCGACGAACTGGAGGCTGGCGCCGACGAGGTGAGCAATCGAGATTGGGCATTCGAGCACATTGCAAATTTTGAATTTCAATTACTACTATATTTGATACAAATTCGGGTGAATGATTGAGATTGGTTGCTTGTTAGTCGCATGGAAGACCGGAAGAGAAACCGTGTCGGTGTCAATTGCACGCCCAGGAGAAAGACTAATGAATATGGACACGTTTTCTTTATTCACATGCACTAGACTTGTTCAAAGTTCAAACAACAACTGAAGTCAACAAGTCTCAACTCTGCAGTTTCCAAGGCTTATATGATATCACCATAAGAAGTTCTCACAAGAAAAAGTAGGACTCCATTAGAGAATTTCTCACCTGCAGTAGCGAGCTCAAGTGGCAACTTAAGTCAAGTAAGCCTGCACATTCCAAGGCTATATAATATCACAAACAGTCCTCACTAGAAAAGAAAAACAAGAACTCCATCTTAGAAGAGATATGTTTCCATCAGTTCTTGGAGCCAAATCTCCCCCTGCTGCTTCTCATCCTGCATCATTTCTTCTCTGCAGCCTCCTCATCTTTCTATCCTGCAACACAATAACACCCTCATCAGCACAGCCCAGCAACAGATCAGAGACCGATTTACAAGCTCTACTCTGCTTCAAGCAAAGCATAACCAACGACCCCACCGGTGCTTTCAGCTCATGGAGCATATCCCTACACTTCTGCAGATGGAATGGTGTCACATGTGGCAGGACATCTCCAGCTCATGTTGTCTCCATAAACCTTACCTCCATGAAGCTCAGTGGAGTTCTGCCAGCTTGCATGGGCAACCTCACCTCGTTGCAAACTCTGGTTCTTGACAGAAACAATCTTGAAGGTACCATCCCTGAATCCTTAGCAAGAAGTTTATCACTCATTGAGCTAAATCTTTCGCGTAACTTCCTATCTGGACAGATCCCTGCTAGTTTGTTCAATGGCTCATCCAAACTTGTCACTGTTGATCTCCAAATGAATTCTTTTTCTGGCATAATTCCCCCTCCCCATAAGATGGCCACTCTTCGATTTCTTGGTCTTACTGGAAACTTGCTTTCTGGAAGAATACCAGTATCCCTAGCAAATATTTCATCTCTAAGTTCCATACTGCTAGGACAAAACAATTTATCAGGACCAATTCCAGAATCCTTGAGTCAAATCGCAAACCTGAATAAGCTAGATCTGAGTGGAAACAGATTATCAGGGTTTGTCCCAGTCACACTGTACAATAAGTCGTCGCTTGAATTTTTTGGTATAGGAAACAACAGTCTTATTGGAAAGATACCTCCTGACATTGGTCACACACTTCCAAATCTCAAATCGTTGGTCATGTCTCTGAATAGGTTTGATGGATCAATTCCAACTTCCCTGGCCAATGCATCAAACCTACAAATGCTTGATCTCTCTAGCAATTTGCTAAGTGGGCTTGTACCAGCATTAGGATCCTTGATAAACTTGAATAAACTTTTCCTAGGAAATAACAGGCTAGAAGCTGAAGACTGGTCATTCTTTACTGCTCTGACAAATTGTACACAACTGTTACAATTGTCGATGGAAGGGAATAACCTGAATGGTAGCCTGCCGAAATCAGTTGGCAACCTTTCAACGAATTTTGAGTGGTTTAAATTTGGGGGCAACCAAATTTCCGGAAGAATTCCAGATGAGTTAGGGAACCTCGTTAATCTAACTTTACTCGACATTAACTCGAACATGCTGTCAGGAGAAATTCCCTTGACTATTGGGAACTTGAGGAAATTGTTTATACTGAATCTATCCATGAATAAATTGTCTGGACAAATCCCATCTACAATTGGTAATCTTTCTCAACTTGGCAAGCTTTATCTCGATAATAATAATTTATCTGGTAAAATACCAGCAAGAATAGGGCAGTGCAAAATGCTAAATATGCTAAACTTATCAGTGAACAGCCTAGATGGATCCATACCAGATGAACTTGTCAGTATGTCTTCTCTTTCCTTGGGTTTGGATCTGTCCAACAACAAACTTTCAGGCTCAATACCACAAGAAGTTGGTACTCTGAGCAATCTTGCCCTCCTAAATTTTTCCAACAACCAGTTGTCAGGCCAAATTCCTTCTTCACTCGGCCAGTGTGTTGTTCTTTTGTCCCTAAACATGGAAGGCAACAATCTCATTGGGAATATACCACCGGCATTAACTTCACTGCATGCCATTCAACGAATTGATCTCTCTGAGAACAACTTATCCAGTGAAGTTCCTGTGTTCTTCGAGAACTTTATCAGCCTAGCCCACCTAAATTTATCATACAACTATTTTGAAGGGCCAATTCCCATCAGCGGTATCTTTCAAAGACCAAATTCTGTAAGCCTGGAAGGAAATAAAGGGTTATGTGCGAATATTCACATATTGAACTTGCCGATATGCCCCAGCTCACCAGCTAAAACGAAGAACAATAAACGACTGCTACTGAAAGTTATTCCCTCCATTACTATTGCTTTATTCTCAGCTCTATGCTTAATTTTCGCTCTTGTCACTCTATGGAAGAGAAGGATGATTTCGTTCTCATGGTTCAATTATGGGCATAGACAGTGCACTGATGTGCTCAGACAATTCAGTGGCATGCTCAACATGCTTTGTTCGTCCAATCCAAAGAGAAGGGAAGTGCCAACAACTCCAATCAACAATGAGACGCTGAAGAAGGTCTCATATGGTGACATTCTTAAAGCTACTAATTGGTTTTCTTCAGTCCATACAATAAGTTCAACCCATACTGGATCAGTTTATGTTGGTAGGTTTAAGTCTGACAAAAGCCTAGTTGCTATCAAAGTATTCAACTTGAATCAGCCTGGTGCATATGAGAGTTACTTTATTGAGTGTGAAGTGCTAAGAAGCACCCGCCATAGGAATCTAATGAGACCTTTGACCCTATGTTCAACATTGGACAAAGAAAACCATGAATTCAAAGCGCTAATCTTCAAGTTCATGGTTAATGGTAGCCTTGAAAGATGGTTGTACTCTGAGCAGCATTATGGAATCAAAGATAGAGTGCTATGCTTAGGTCAGAGAATATGCATAGCAACTGAGGTGGCTTCTGCTCTGGATTATATCCACAACCATCTAACACCCCCTTTGGTCCATTGTGATGTGAAGCCGAGCAATATCCTCTTAGACGATGACATGACCGCGCGTCTAGGTGATTTTGGGTCAGCAAAGTTTCTATTTCCAGATCTGGTCAGTCTGGAAAGCTTAGCTGATATAGGAGGAACTATTGGGTACATTGCACCAGGTGTGTTCCTTTTCTCTCTCTTCTTAACTAGTATGTTTTTTTTTTGTTGATATAACTGTAGTAATTCAATGTAGTTATTCACTTTTACAGAGTATGGAATGGGCTGTCAAATCTCAACAGGAGGCGATGTGTATAGTTTTGGAGTGCTACTTCTGGAGATGCTTACAGGAAAGCAGCCAACTGATGATACATTTGCGGATGGAGTTAGCATTCATAACTTTATTGACTCCATGTTCCCAGATAGAGTTGCAGAGATTCTAGATCCCTATATGATGCACGAGGAGCACCAAGTGTATCCAGCAGAATGGTTTGAGGCCTGTATTAAGCCGTTAGTTGCACTTGGCCTGTCATGTTCCATGGTATCTCCGAAAGACAGACCTGGAATGCAAGATGTCTGTGCAAAACTTTGTGCTGTCAAAGAAACTTTTCTGCAGTTCGGTGATTTCAGTTTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014013