BGIOSGA014015

From RiceWiki
Revision as of 10:11, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014015| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014015, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA014015

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014015, complete gene.

LocusTag

OSJNBB0071D01.4

Ensembl Transcript ID

BGIOSGA014015-TA

Ensembl Protein ID

BGIOSGA014015-PA

Length

6268

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:41462701..41468968

Sequence Coding Region

41462701..41463041,41463135..41463270,41465767..41465990,41466068..41466292,41466716..41466851
,41466928..41467001,41467094..41467193,41467276..41467336,41468591..41468662
,41468745..41468968

Genome Context

<gbrowseImage1> name=IndicaChromosome03:41462701..41468968 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:41462701..41468968 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCATCCTTCCAGCTTCTCCTCCACCCCTTGCTCTTGCTTCTCGTCGTTGGCGGCGTCGCGGGCGGCGGCGGCGGAGGTGGTCGCCTGAGGGCGCCTTCGCTGGAATTCCACCACCGGTTCTCTTCTCCGGTGCAGCGGTGGGCGGAGGCGCGCGGGCACGTGCTCCCCGGAGGCTGGCCGGAGCACGGCAGCGCCGATTACGTTGCGGCCCTGAACGGGCACGACCGCCGCCGCGCGCTCTCAGCAGCCGGCGGCGACGGCGGAGGAGGAGGAGACAAGCCCCCGCCGCTCACGTTTTCTGAGGGAAACGCCACCCTCAAGGTCAGCAACCTCGGATTCTTGCACTATGCGCTTGTGACGGTCGGCACGCCGGGCCAGACGTTCATGGTGGCGCTGGACACCGGGAGTGACCTCTTCTGGCTGCCGTGCCAGTGTGATGGGTGTACGCCGCCGGCTTCGGCCGCTTCTGGATCGGCTTCCTTTTACATCCCTAGTATGTCGTCAACAAGCCAAGCAGTTCCTTGCAACAGCCAATTTTGTGAGCTGAGAAAGGAATGCTCTACAACATCACAGTGTCCATACAAGATGGTTTATGTTTCTGCAGACACATCTTCTTCTGGTTTTCTAGTAGAGGATGTGCTCTACTTGTCAACAGAGGATGCCATTCCTCAAATTCTCAAGGCGCAAATACTATTTGGATGTGGACAGGTTCAGACAGGATCATTTCTGGATGCTGCTGCTCCAAACGGTCTATTTGGACTTGGGATAGATATGATATCAATTCCTAGCATTCTAGCACAAAAAGGTCTGACATCTAATTCCTTCGCAATGTGCTTTAGCCGTGATGGTATTGGGAGAATTAGCTTTGGAGATCAAGGCAGCTCAGATCAAGAGGAGACACCACTAGATGTTAACCCACAACATCCTACATATACGATCAGCATCAGTGAGATGACAGTTGGAAATAGCCTCACGGACTTGGAATTTAGTACTATTTTCGACACAGGAACGTCGTTCACATACTTGGCAGACCCAGCTTATACATATATAACACAGAGTTTCCACGCACAAGTTCATGCAAATCGCCATGCCGCTGACTCAAGAATTCCTTTTGAATATTGCTATGATCTGAGCTCCAGTGAAGATAGGATTCAAACTCCTAGTATAAGTTTGAGAACAGTGGGTGGAAGTGTATTTCCCGTTATTGATGAAGGGCAGGTTATCTCCATTCAGCAACATGAGTATGTTTATTGCTTGGCGATTGTCAAGAGTGCAAAACTCAATATAATTGGGCAAAATTTCATGACTGGTCTTCGTGTTGTGTTCGATCGAGAAAGGAAAATTCTTGGTTGGAAGAAATTCAATTGTTATGACACTGATAGTTCAAATCCTCTTTCTATCAATTCACGGAATTCTTCAGGTTTCTCCCCTTCAGCACCTGAGAATTACGCCCCCGAGGAAACAAAGGGTGGGAACCCAGCAAGCGTTACACAGTTGAGACCCCTTAGTAATTCCAACCCAGTAATGTGGTATGATAGTTTAGTCTTCAGGTTTCTTTTGGTCAATTTGGCCGCTCTGATCCTCTTCTAA</cdnaseq>

Protein Sequence

<aaseq>MSSFQLLLHPLLLLLVVGGVAGGGGGGGRLRAPSLEFHHRFSSPVQRWAEARGHVLPGGWPEHGSADYVAALNGHDRRRALSAAGGDGGGGGDKPPPLTFSEGNATLKVSNLGFLHYALVTVGTPGQTFMVALDTGSDLFWLPCQCDGCTPPASAASGSASFYIPSMSSTSQAVPCNSQFCELRKECSTTSQCPYKMVYVSADTSSSGFLVEDVLYLSTEDAIPQILKAQILFGCGQVQTGSFLDAAAPNGLFGLGIDMISIPSILAQKGLTSNSFAMCFSRDGIGRISFGDQGSSDQEETPLDVNPQHPTYTISISEMTVGNSLTDLEFSTIFDTGTSFTYLADPAYTYITQSFHAQVHANRHAADSRIPFEYCYDLSSSEDRIQTPSISLRTVGGSVFPVIDEGQVISIQQHEYVYCLAIVKSAKLNIIGQNFMTGLRVVFDRERKILGWKKFNCYDTDSSNPLSINSRNSSGFSPSAPENYAPEETKGGNPASVTQLRPLSNSNPVMWYDSLVFRFLLVNLAALILF</aaseq>

Gene Sequence

<dnaseqindica>1..341#435..570#3067..3290#3368..3592#4016..4151#4228..4301#4394..4493#4576..4636#5891..5962#6045..6268#ATGTCATCCTTCCAGCTTCTCCTCCACCCCTTGCTCTTGCTTCTCGTCGTTGGCGGCGTCGCGGGCGGCGGCGGCGGAGGTGGTCGCCTGAGGGCGCCTTCGCTGGAATTCCACCACCGGTTCTCTTCTCCGGTGCAGCGGTGGGCGGAGGCGCGCGGGCACGTGCTCCCCGGAGGCTGGCCGGAGCACGGCAGCGCCGATTACGTTGCGGCCCTGAACGGGCACGACCGCCGCCGCGCGCTCTCAGCAGCCGGCGGCGACGGCGGAGGAGGAGGAGACAAGCCCCCGCCGCTCACGTTTTCTGAGGGAAACGCCACCCTCAAGGTCAGCAACCTCGGATTGTAAGGCCTCTCCCCGTCTCTCACTCCCTCTTCGTAGTGGTTTGGTGCTTGAGAGTTTTAGTGAAGAGTCGCATTTTTGTGGATATGTAAAAGCTTGCACTATGCGCTTGTGACGGTCGGCACGCCGGGCCAGACGTTCATGGTGGCGCTGGACACCGGGAGTGACCTCTTCTGGCTGCCGTGCCAGTGTGATGGGTGTACGCCGCCGGCTTCGGCCGCTTCTGGATCGGTAAGAGCACTATTCTCTTGACAATTCGATAGATCCTTTGTTCATTTAGGTGTTGGTGCATAATTCAGAGCTATACAACGATCCATGCTGCAAGAATTTTCATGTTGCTTCAGTGGCTTTTAAACTGTGCAATGCTTTTTAGGATTTTTGCTGATATACGGTATGATTTGGTGATATGCTGCATGTGGGAATGGACTTATGGTGCCAGAAGATGGTTGCTACTAATTACACAGCTTAGTAAAAATTGAATGAGATGTCGATTCGCTACGATGTCTGGCATTATGCCGTTCAGTTGGATGAAAATATCTGATCTTTCTGGCCTTTAATTTGCTCTTGATTTATTTGTCAAAAACGCATGGGCTTGGTCATAATCTATAACTAGTGTCGAATGTTGTGGGAAATTGTGTAACCTTTCATAATGAAGTCCTAATTAGGTGTTTAAATGGTATGTATTGTCCTGTAAAATTGTAAATTGAAGTACAATATCTGAGTGATCATCTAATCTTATGAATCGACAGGTCTCAATAACGCATAAAACAACATTGACTGCATAGATCAGCCGTTCTGAAATCTTGTTGACTTCAGTTCAATCTTCAATGTTGTTTCTTGCTGCTGTTTTATTTTCTTCTTCCCACTGTTCTAAACAATGACCCATTTAAAGCCTTGTTGGCCGTTCTCATAGATCCTAAATGTGGTCACCTTACTGCTATGCTTTTCACATAAACAGTAATATAGAGATTTACCAAGGAAACATGACATTTATTGTTTTAGGCTGTAAACCATTTTTTCTATCCTTTCGGTAGCATCAAGAGTCAAGTTTGCAGAGTATATAGCGGGCATGAAGGTTGCCAAATATGTCCGCTATAACTACAATGCCATAGACCTTCATTTCTTTTTCTATTCTTTTGAGTGAATTGCACAAATTGCAAGCATTTTTACACATGTTTCACAAAATACAAGTTCAGTGGATATTCTCACACACCTACATGTTTTGTGCGGTATTAGCTTGATTTCTGTATCACCCCCATCAACTGGCCCTTGAATGGGGCATCTACAATGAGATATATGTGTCTCATTGTACATGTTTGTGATGACTATGATGCAAGGGCTGACGCAGCAAGTGGGTACAGAATACTTAATCACAAGGCCTCTCTTTAATCCTGCAAGGGTGAGTCAACTTAGCAAGACAGAAATCAGACTAAGTGGAACGCAAGGCATGAAACATGTTGGTTTGTGAGAATGCCATCGAACTTGTACATTTGTGCAACATATGTCAGTACCTGTACATTTGTTGCAGCTGTTGCCTTCTAGATTAAAAGCCTGTGTTGTGTGTGTACTTTCACGATTTCAAATTTTCCAGTAAATGAATACTTGTTTAGTTGTTTTAGCTTCCAAGAGTAGAAATGCTTTAATATTACATCAGGAAAAATTTGAAGGTATACATTATATCTCTTAAACCATATCATTCAAGGGTCCTTGATGTTATTTGCTGTAACTTGTGGTGGGTTACTATAGCTGGTGTGCATGGGCCACTATTCTGTCATATAACAAATAAACACAATGATAATATGCTCATTATTTGGATGTTACTCTAGTGTGTTTGTTGTAGCCAATGAGTATAAATACTGATAGTCTGTCCTTGATGTTATGAATAAACACTGTATAGGGCCTAAAGTCTTATCCTGGACCAGTTTTCTACATCCTTCCATCACCAAACCGGTGCATTCTTTCACCTCAAACCATTCTACTTCAGGCCTTCCTCTGATGGATTTAATACCTCTATAGTAGGGCTGGTTCGTAATCCTCCAGCCAGACAGCAGCCATGAAGCTTCGTTGCTGCCTGGCATAATTAAGTCATGAGAATAAGCTTGGTTGGCTACCAAGTTATTTTTATGATTGTACTTTGAAATTTAGAAATTAGGGCAATCATTCTTATCAGTTGCCTATTTGGAAATATTAGATTGAGCTTTTAGGGAGTGGCTCTATATAGTATGACATTGTCATCCTTGGCTAGATGTAACAAAGTTGCTAGTCTCACTTTCTTCTTATGATCTGAAGACTTCCTACCGTGTTGGAAGGAGCTCTGCCGGAAGCTAGTAGAGGCCGAGACTCAAGTGCTTGAGCCTTATCCAACCATAACTGTACCACTTGATATAATTGTTGTGCATATATGTAGCTTGAGTGTACCTGATTGTCTTTTTCTATGATTTTTTTTTGTTTTTATTTCCTTTGTTTCTGTTCTCAACTTCTCATACATACCTTAGTCTATCTCCTTTTTGGACAAAAGTTTTGCCTGCTTGTTTTTTTATTTCTCACACTTAAAACTTCTATAGCAAAGTAATATTTTCTATTGTCATATTGACTGTGTTGGTACTCTGAAAAATTACAATTTATTTTTCTTCCAAGTGGCACTTTTGCTACATGTATGTTCTCTCTTAAGATAAGATTTGGGTAACTATATTGCTCAGTTACTCACTGGCTGCCCCTGGGTTTCAGGCTTCCTTTTACATCCCTAGTATGTCGTCAACAAGCCAAGCAGTTCCTTGCAACAGCCAATTTTGTGAGCTGAGAAAGGAATGCTCTACAACATCACAGTGTCCATACAAGATGGTTTATGTTTCTGCAGACACATCTTCTTCTGGTTTTCTAGTAGAGGATGTGCTCTACTTGTCAACAGAGGATGCCATTCCTCAAATTCTCAAGGCGCAAATACTATTTGGGTAATTTTTACATTTCATATAATGGGTGAAGGAGACTGTGTTCAGCATTTTGATAAAATCTTCTCTACATTTATCAGATGTGGACAGGTTCAGACAGGATCATTTCTGGATGCTGCTGCTCCAAACGGTCTATTTGGACTTGGGATAGATATGATATCAATTCCTAGCATTCTAGCACAAAAAGGTCTGACATCTAATTCCTTCGCAATGTGCTTTAGCCGTGATGGTATTGGGAGAATTAGCTTTGGAGATCAAGGCAGCTCAGATCAAGAGGAGACACCACTAGATGTTAACCCACAACAGTGAGCAATTTCTTTTTTTTACTAGAGTAAATTTCAAGTTGCTCGAAACCATAGGGATTTTGGCATGTGGCAGTGGCAGATAACCTCTAGTGTTATGGTCCTAGAGTTTCAAAAAACCACACCCATGACCAATCTTAAGCAATCTAACTTCGATTGATGCAGCTCCTATATGGCGGGATCAAAGAACATGTTACTTTGGATATGTGATTCCAGAACTCATATATACAAATCAAAGAATTAACAGGTCACTATTGGTTTTCTAAAGCATTTTTAACCATAGTACATGGNTGTTATGTGCCACATGCTAAAACTCGTATGGTTTGTGCAATTTGGACTATAATACCTGGGTTTTGTTTACTCTATGTACTATGTTATCTTCTTGTCCATTATTATCTCACGTCTGGATAAAATCTTTTTCTCCAGTCCTACATATACGATCAGCATCAGTGAGATGACAGTTGGAAATAGCCTCACGGACTTGGAATTTAGTACTATTTTCGACACAGGAACGTCGTTCACATACTTGGCAGACCCAGCTTATACATATATAACACAGAGTGTAAGTAAATAATCTGTGAGGGTCTGATCTTTCATTGAGATGGGAGTGATTCACATAACTTTTTTCTCATTTTCAGTTCCACGCACAAGTTCATGCAAATCGCCATGCCGCTGACTCAAGAATTCCTTTTGAATATTGCTATGATCTGAGGTTTTATTCTATACAAAAATATTTTCAGACCTTTTGATTTGTACACTTGCCATTCTGTGTTAAATGACAAATCCCGACTTTAACTTATACAGCTCCAGTGAAGATAGGATTCAAACTCCTAGTATAAGTTTGAGAACAGTGGGTGGAAGTGTATTTCCCGTTATTGATGAAGGGCAGGTTATCTCCATTCAGGTACGATGAGCCCCATATACCTGTATTTATGTAAGTTTGTATACCCTATATGTAACCATATGGTTTTGTTTGAAATTTGCAGCAACATGAGTATGTTTATTGCTTGGCGATTGTCAAGAGTGCAAAACTCAATATAATTGGGCGTAAGTTTGCGACCAAACTATTCAGTCATTTTTTTGTTGTTGAAAAATCAAATTTCACAATATTAGTACTTATTTGAACATATCCTCTGCGAGAATGAAACATAAAAATGTTATGTTTCATCCTAAAATCAATTCAGTTGTTCCTTTTTGAGTAGGACATGTGAAAAACTGAAAATTGCCTAGAACCAAATTTCTCATGCTTTTGAATACCATACTGAATGATGTTCCTGTTCATTAGTTAAGGACACCCAAGGGTCATCTTTTCACTGATGACTACCTTTTTTTTTCTGTGGAATACTGCTCTACAAATGTTGGCATTCTATGTTCTCAATGCACACATCTAAATCTCTTCTCTGTTTCATGTAAGGCATAATAATTCATGAGCACGTTATTAGTTGGCAACTTGGCATAACACCTCTTATGGTAATTAGTATACCACTATTCCATTTGTTAAAGCAGCCTCTAGTCTGCTGCAGACTTGCTAATGTCTAAACCTGGTTAGCTCCTAGTCCAAATTTGACTAACCAAGAAGGTTCAAATTTCCATTTGAGATTTCTTATAAAAACATAACAATTTTAAAAATTACACTTTTAAGAATCAGTTTCATAAGCTACACTTCTGTATCACAAAAAAAATAAACTGGAACATGCAGGAGTATAGTTTTCCAACAGTTTTCTAAGGACTAGTCCGCTTATCCACTAAGGCACTAAAGGCAGCATATAGCTAGAACATACGGGCCAACACTTCAGTAAGATGCCGCCAGCATCAACTATCGTGTGACTCTGATTGACTCATTGCAATTGGTTCTTCATTGACTTCATGCCTTGCCACCACTTTGTTGAAAAGATTATGGCTGAGGAATTGGTTCAATACATAAGAGCTATTTCCTACCATGCACAACAGTACGGTGATATATTATTTCTTAGCATTGCCACCACATATGGTTTTTAACTGCTAATATGTATATTCTTCAATCGTTGGATAGCCATGTAGTCATGTAAATGTGTTAATCAACTGTACTTTTTGAACCGCATGGGGGTTCTTCTGGATGTAATCTGGAATGGGAAGGTCTGGCCTCCCCACTCATTTGTCCAATATCTTCTTCCCCCAAGTACATTGACATTCAGCAGTCTGTAGCTTGCAGAACATGATTATTTCTAAAATTGAAGTACTTTTCCATTATGTTTTCATTGGACCACTTTTCATGTTTAATTGTGTTCATACAGTACAACTAATTGTATAACTATCGTGCAGAAAATTTCATGACTGGTCTTCGTGTTGTGTTCGATCGAGAAAGGAAAATTCTTGGTTGGAAGAAATTCAATTGTGAGTAAAATGATCATTATATTGTTTTTGTCACTTTGAAGGCTTACTCATAATTTGGTGTTGATATGTTTTATCAACACAGGTTATGACACTGATAGTTCAAATCCTCTTTCTATCAATTCACGGAATTCTTCAGGTTTCTCCCCTTCAGCACCTGAGAATTACGCCCCCGAGGAAACAAAGGGTGGGAACCCAGCAAGCGTTACACAGTTGAGACCCCTTAGTAATTCCAACCCAGTAATGTGGTATGATAGTTTAGTCTTCAGGTTTCTTTTGGTCAATTTGGCCGCTCTGATCCTCTTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014015