BGIOSGA005336

From RiceWiki
Revision as of 02:20, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005336| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005336, complete gene.| tag = OsI_095...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA005336

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005336, complete gene.

LocusTag

OsI_09501

Ensembl Transcript ID

BGIOSGA005336-TA

Ensembl Protein ID

BGIOSGA005336-PA

Length

1649

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:37539612..37541260

Sequence Coding Region

37541225..37541260,37540158..37541078,37539612..37540070

Genome Context

<gbrowseImage1> name=IndicaChromosome02:37539612..37541260 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:37539612..37541260 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGAATAACAAGGGCAGTCGCCGCAACCGCAATAAGAAATCTGCAGCTCACAATAACCCCCAACTATTGGTGGATAGGTTCACCAAGCTACCTGATGATCTGCTGCTCAACATCCTCGACCGTCTCAACACCCCCGATGCTGTCAGGACCTGCCTCCTTTCCAAGAGGACGATCCACCTCCGCCATTTGCTCTCAAATTTAGACATTTCGGTTGATTCCTTTGTGCCCCATTATTATGGTTATTATGCCACCTCCAAGGATGCAATTCAGATTCAGATGAACGCTGCTGTGTCTGATGCAACAGACAACATCCTCAATTTCAGAAACCAAGAGATTCCCCTTCGCCAACTCACCATATGCTTCTACCTCAAGTACTATGACTGTCTCACCATTGGCAAAGCTGTTGCCCGAGCAATGGCCACCCACAACCTCGACAGCGCCGAATTCATTATTCTGACTGGTAACCGGGCACAACATTGCTCTATCGACGATCTCCGCCACAATGGCAAGCAGCTCATGACATTTTTTGGTGCCTGTACTGATGCATTTGCCGGCCTTACGCGTCTCCACCTACGCAACTTAAGGCTTGCTGAAACTGACATTCTCAACATCATCGCCACATGCAAACGGCTAGAGTATCTGTGTTTGTCCATGTGTCAAACAGAGGATAGCGTGTTGCAGATGAAGTTTGAACATCCGCGGCTTGTTGAGCTTAATATCTCTAGTGCGGGCTTAGAACTAGTTGAGCTCAGCTCCCTACCAAACCTCAAACGCCTTGTTTTTAGTCTGTGGAACTGTCCCCAAGAACCCTTGTCTTTTGGCAACGTCCCGTTGCTTTCGAGCCTAAGCCTCACTGATGAAAGCATGAGATGGCAAAAGGTTATCAGGTTAAGTCAATTCCTTCCTAATGTCCTTTCCATAAGAGACCTGCACCTCAACTTCTCGAGCGAAAAGATTTGGGTTCAGCCAGAGTGCCCGAAACTGCTTGCACATGTTCTTCGGAATCTGCAAGTTCTGAATCTGGATGAACTCCCTGAAGGATGTGATATCGCTTGGACACGCTTCTTTATTGAAGCTGCACCTGTCCTGAAGGAGCTATGCATAACAGTTTGGGACCATTGGTGTGAGATGGAGACAGACAGTGTGGAACGGGAAGCACAGGGCTTCTGTGACAAAACAAACGTGGAGTGGGAGTCATCCGCGCCTGATGGTTTCAGGCATTACAACCTGACGAAGCTCACAATCTATGGTTTCCAACCAAATGACAACTTCCTTGGATACATCAGGCACATCATGGAAGCTGCTGTTAACCTAGAGGATGTATCCCTGTACGACAGGAAGGTGCTCGAGTGCTGCGAAGACTTGGATCCCAAGATCAAGGTTGCTCCGACAGGGTATCCGGAGACCATCTAG</cdnaseq>

Protein Sequence

<aaseq>MKNNKGSRRNRNKKSAAHNNPQLLVDRFTKLPDDLLLNILDRLNTPDAVRTCLLSKRTIHLRHLLSNLDISVDSFVPHYYGYYATSKDAIQIQMNAAVSDATDNILNFRNQEIPLRQLTICFYLKYYDCLTIGKAVARAMATHNLDSAEFIILTGNRAQHCSIDDLRHNGKQLMTFFGACTDAFAGLTRLHLRNLRLAETDILNIIATCKRLEYLCLSMCQTEDSVLQMKFEHPRLVELNISSAGLELVELSSLPNLKRLVFSLWNCPQEPLSFGNVPLLSSLSLTDESMRWQKVIRLSQFLPNVLSIRDLHLNFSSEKIWVQPECPKLLAHVLRNLQVLNLDELPEGCDIAWTRFFIEAAPVLKELCITVWDHWCEMETDSVEREAQGFCDKTNVEWESSAPDGFRHYNLTKLTIYGFQPNDNFLGYIRHIMEAAVNLEDVSLYDRKVLECCEDLDPKIKVAPTGYPETI</aaseq>

Gene Sequence

<dnaseqindica>1..36#183..1103#1191..1649#ATGAAGAATAACAAGGGCAGTCGCCGCAACCGCAATGTAAGCCCAGCCTAATTAACTAGCCTCCTTTTATTCATCTACTATCGCTTCCTTCCTTCCTTTTGCATTTCTCTATCTGTATTCTCTCTTGGATATGTATGCATGCACTACTTAATTTCGTTTTGCAATTATATTGATTGATGCAGAAGAAATCTGCAGCTCACAATAACCCCCAACTATTGGTGGATAGGTTCACCAAGCTACCTGATGATCTGCTGCTCAACATCCTCGACCGTCTCAACACCCCCGATGCTGTCAGGACCTGCCTCCTTTCCAAGAGGACGATCCACCTCCGCCATTTGCTCTCAAATTTAGACATTTCGGTTGATTCCTTTGTGCCCCATTATTATGGTTATTATGCCACCTCCAAGGATGCAATTCAGATTCAGATGAACGCTGCTGTGTCTGATGCAACAGACAACATCCTCAATTTCAGAAACCAAGAGATTCCCCTTCGCCAACTCACCATATGCTTCTACCTCAAGTACTATGACTGTCTCACCATTGGCAAAGCTGTTGCCCGAGCAATGGCCACCCACAACCTCGACAGCGCCGAATTCATTATTCTGACTGGTAACCGGGCACAACATTGCTCTATCGACGATCTCCGCCACAATGGCAAGCAGCTCATGACATTTTTTGGTGCCTGTACTGATGCATTTGCCGGCCTTACGCGTCTCCACCTACGCAACTTAAGGCTTGCTGAAACTGACATTCTCAACATCATCGCCACATGCAAACGGCTAGAGTATCTGTGTTTGTCCATGTGTCAAACAGAGGATAGCGTGTTGCAGATGAAGTTTGAACATCCGCGGCTTGTTGAGCTTAATATCTCTAGTGCGGGCTTAGAACTAGTTGAGCTCAGCTCCCTACCAAACCTCAAACGCCTTGTTTTTAGTCTGTGGAACTGTCCCCAAGAACCCTTGTCTTTTGGCAACGTCCCGTTGCTTTCGAGCCTAAGCCTCACTGATGAAAGCATGAGATGGCAAAAGGTTATCAGGTTAAGTCAATTCCTTCCTAATGTCCTTTCCATAAGAGACCTGCACCTCAACTTCTCGAGCGAAAAGGTAATTACTTTAAGCAAGTCCTCAGCAGGTTATTTGTTCATCATTCTCAACTTAATCTGCATTCTTCCATTATTACTTTTATTGCAGATTTGGGTTCAGCCAGAGTGCCCGAAACTGCTTGCACATGTTCTTCGGAATCTGCAAGTTCTGAATCTGGATGAACTCCCTGAAGGATGTGATATCGCTTGGACACGCTTCTTTATTGAAGCTGCACCTGTCCTGAAGGAGCTATGCATAACAGTTTGGGACCATTGGTGTGAGATGGAGACAGACAGTGTGGAACGGGAAGCACAGGGCTTCTGTGACAAAACAAACGTGGAGTGGGAGTCATCCGCGCCTGATGGTTTCAGGCATTACAACCTGACGAAGCTCACAATCTATGGTTTCCAACCAAATGACAACTTCCTTGGATACATCAGGCACATCATGGAAGCTGCTGTTAACCTAGAGGATGTATCCCTGTACGACAGGAAGGTGCTCGAGTGCTGCGAAGACTTGGATCCCAAGATCAAGGTTGCTCCGACAGGGTATCCGGAGACCATCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005336