BGIOSGA005353

From RiceWiki
Revision as of 02:20, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005353| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005353, complete gene.| tag = OsI_094...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA005353

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005353, complete gene.

LocusTag

OsI_09461

Ensembl Transcript ID

BGIOSGA005353-TA

Ensembl Protein ID

BGIOSGA005353-PA

Length

1339

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:37299389..37300727

Sequence Coding Region

37300582..37300727,37299711..37300482,37299389..37299427

Genome Context

<gbrowseImage1> name=IndicaChromosome02:37299389..37300727 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:37299389..37300727 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGCGACGGCGCTAAGTGTGGGCAAATCCGTGCTGAATGGAGCGCTTGGCTACGCAAAATCTGCATTTGCCGAGGAGGTGGCCTTGCAGCTTGGTATCCAGAAAGACCACACATTTGTTGCAGATGAGCTTGAGATGATGAGCCTCCAGGATTTTGCTGTTCATCTGAAGAGGCCATCCTGGTGGCGATTCCCTCGCACACTGCTCGAGCGGCGCCATGTGGCCAAGCAGATGAAGGAGCTCAGGAACAAGGTCGAGGATGTCAGCCAGAGGAATGTGCGGTACCACCTCATCAAGGGCTTCAGCTCCAAGGCCACCATCACCTCCGCTGAGCAATCTAGCGTTATTGCTGCAGCCATATTTGGCATTGACGATGCAAGGCGTGCCGCAAAGCAAGATGATCAGAGAGTGGATCTAGTCCAACTAATCAACAATGAGGATCAGGACCTTAAAGTGATCGCGGTATGGGGAACAAGTGGTGATATGGGCCAGATAACAATAATCAGGATGGCTTACGAGAACCCAGATGTTCAAATCAGATTCCTATGCCGTGCATGGGTAAGGGTGATTCATCCTTTCAATCCAAGGGACTTTGTCCAGAGCTTGGTGAATCAGCTTCATGCAACCCAAGGGGTTGAAGCTCTGTTGGAGAAAGAGAAGATAGAACAAGATTTAGCTAAGGAATTCAATGAATGTGTCAATGAAAGGAGTTGTCTAATTGTGCTTAATGACCTATCCACCATTGAAGAGTGGGACCAGATTAAGAAATGCTTCCAAAACTGCAAGAAAGGAAGCCGAATCATACTGTCAAGCACTCAAGTTGAAGTTGCAAGCTTATGTGCAGGGCAAGAAAGCCAAGCCTCAGAGCTAAAGCAATTGTCTGCTGATCAAACCCTTTACGCATTCTACGATAAGGCTTACAAGTCAGACAACGATGCAAAAAAGGGCAACTAA</cdnaseq>

Protein Sequence

<aaseq>MEATALSVGKSVLNGALGYAKSAFAEEVALQLGIQKDHTFVADELEMMSLQDFAVHLKRPSWWRFPRTLLERRHVAKQMKELRNKVEDVSQRNVRYHLIKGFSSKATITSAEQSSVIAAAIFGIDDARRAAKQDDQRVDLVQLINNEDQDLKVIAVWGTSGDMGQITIIRMAYENPDVQIRFLCRAWVRVIHPFNPRDFVQSLVNQLHATQGVEALLEKEKIEQDLAKEFNECVNERSCLIVLNDLSTIEEWDQIKKCFQNCKKGSRIILSSTQVEVASLCAGQESQASELKQLSADQTLYAFYDKAYKSDNDAKKGN</aaseq>

Gene Sequence

<dnaseqindica>1..146#246..1017#1301..1339#ATGGAGGCGACGGCGCTAAGTGTGGGCAAATCCGTGCTGAATGGAGCGCTTGGCTACGCAAAATCTGCATTTGCCGAGGAGGTGGCCTTGCAGCTTGGTATCCAGAAAGACCACACATTTGTTGCAGATGAGCTTGAGATGATGAGGTCTTTCATGATGGAGGTGCACGAGGAGCAAGATAACAGCAAAGTGGTCAAGACTTGGGTGAAGTAAGTCCGTGACACTGCCTATGATGTTGAGGACAGCCTCCAGGATTTTGCTGTTCATCTGAAGAGGCCATCCTGGTGGCGATTCCCTCGCACACTGCTCGAGCGGCGCCATGTGGCCAAGCAGATGAAGGAGCTCAGGAACAAGGTCGAGGATGTCAGCCAGAGGAATGTGCGGTACCACCTCATCAAGGGCTTCAGCTCCAAGGCCACCATCACCTCCGCTGAGCAATCTAGCGTTATTGCTGCAGCCATATTTGGCATTGACGATGCAAGGCGTGCCGCAAAGCAAGATGATCAGAGAGTGGATCTAGTCCAACTAATCAACAATGAGGATCAGGACCTTAAAGTGATCGCGGTATGGGGAACAAGTGGTGATATGGGCCAGATAACAATAATCAGGATGGCTTACGAGAACCCAGATGTTCAAATCAGATTCCTATGCCGTGCATGGGTAAGGGTGATTCATCCTTTCAATCCAAGGGACTTTGTCCAGAGCTTGGTGAATCAGCTTCATGCAACCCAAGGGGTTGAAGCTCTGTTGGAGAAAGAGAAGATAGAACAAGATTTAGCTAAGGAATTCAATGAATGTGTCAATGAAAGGAGTTGTCTAATTGTGCTTAATGACCTATCCACCATTGAAGAGTGGGACCAGATTAAGAAATGCTTCCAAAACTGCAAGAAAGGAAGCCGAATCATACTGTCAAGCACTCAAGTTGAAGTTGCAAGCTTATGTGCAGGGCAAGAAAGCCAAGCCTCAGAGCTAAAGCAATTGTCTGCTGATCAAACCCTTTACGCATTCTACGATAAGGTAATATACTCACACTTCCAGCATACCTCTCGATATCATTTTTAATTTAGTTATGTCTTTAGATAATTTCTGATTCAATTGTGTAGGCTAGTTGATGTGCGTGGGAGTTACCATTCCATTAGAAACACATGACCTAATGCAACTAACAAGTGCTCCTCCTGTTCTCTCTCATTTGCCTTTTGGGAATGCATGCACTCAACATTTTAAGATTACAGCCAAAATATATGTATTTGAATTTGTCAAAACAAAGATGTATGCTAGAAAAAGAAATGGTCTAATACAGGCTTACAAGTCAGACAACGATGCAAAAAAGGGCAACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005353