BGIOSGA005361

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Revision as of 02:21, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005361| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005361, complete gene.| tag = P0643F0...")
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Gene Name

BGIOSGA005361

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005361, complete gene.

LocusTag

P0643F09.32

Ensembl Transcript ID

BGIOSGA005361-TA

Ensembl Protein ID

BGIOSGA005361-PA

Length

5118

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:37224338..37229455

Sequence Coding Region

37229386..37229455,37228219..37228304,37227990..37228066,37227792..37227886,37227264..37227333
,37227009..37227078,37226729..37226802,37226612..37226654,37226204..37226285
,37225732..37225820,37225557..37225642,37225256..37225316,37224628..37224734
,37224485..37224543,37224338..37224396

Genome Context

<gbrowseImage1> name=IndicaChromosome02:37224338..37229455 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:37224338..37229455 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCGGCGGCGATCCACCAGTTCGCCGAGTGCATCACCTGCCACGCGTGGAGCCCCGACCACTCGATGATTGCCTTTTGTCCAAACAACAATGAAGTACATATCTATAAGTTTTTTACTGACAAGTGGGAGAAACTTCATGTTCTTTCAAAGCATGATCAAATAGTATCTGGAATAGATTGGAGTAGATCTTCCAACAAGATCGTAACGGTCTCACATGATAGAAATTCATATGTTTGGACACAAGAGGGCCATGATTGGGTTCCTACCCTTGTTATTCTCAAGGTAAATCGTGCAGCTTTATGTGTCCAGTGGAGCCCAAAAGAAAACAAGTTTGCCGTAGGAAGTGGTGCTAAGTCTGTGTGCATTTGCTACTATGAACAAGACAACAACTGGTGGATTAGCAAGGTTGTTAGGAAGAAGCATGAATCTTCTGTCACTAGTGTTGCATGGCATCCAAACAATATACTTCTTGCAACAACATCAACTGATGGTAAATGCAGAGTGTTATCCACTTTCATCAAGGGTGTCGATACAAGGGGATCACATGCGAGCACTTCTACTGATTGGAAATTTGGAGAGCAAATTGCTCAGCTTGACCTATCATCTATGTGGGCATTTGGTGTAAGGTGGTCGCCAAGTGGAAAGACACTAGCCTATGCAGGGCACAATTCCATGATTTATTTCATTGATGATGTTGAAACGTCTCCTGCTGCACAGAATTTAGCACTGCGTGATCTGCCTCTCCGTGATATTCTTTTTCTTTCTGAAAGGACGGTGATTGGTGTTGGATTTGATTGCAATCCTATGATCTTTTCTGCAGATGAGACTGGACTTTGGAGCTTTGTCAGATACTTGGATGAAAGAAAAGTAACTACATCAACTTCAAGAGCTTCACAGCTATCTGAAGCCTTCGGAAAGCTATATGGCCAATCAAAGCAAGTGGCAAGCAGTGATACTGTTGAACCATCAAAGCCTCGTGGTGGTGTTCATGAGAATTGCATAACTTGCATCGTGCCATTGAGAAAAGGAAACGACAGTATTGTCAAACGGTTCAGCACGTCAGGATTGGATGGTAAGATTGTGGTATGGGATGCAGAAAACCACATCGACATTAAAAAATAG</cdnaseq>

Protein Sequence

<aaseq>MAAAAIHQFAECITCHAWSPDHSMIAFCPNNNEVHIYKFFTDKWEKLHVLSKHDQIVSGIDWSRSSNKIVTVSHDRNSYVWTQEGHDWVPTLVILKVNRAALCVQWSPKENKFAVGSGAKSVCICYYEQDNNWWISKVVRKKHESSVTSVAWHPNNILLATTSTDGKCRVLSTFIKGVDTRGSHASTSTDWKFGEQIAQLDLSSMWAFGVRWSPSGKTLAYAGHNSMIYFIDDVETSPAAQNLALRDLPLRDILFLSERTVIGVGFDCNPMIFSADETGLWSFVRYLDERKVTTSTSRASQLSEAFGKLYGQSKQVASSDTVEPSKPRGGVHENCITCIVPLRKGNDSIVKRFSTSGLDGKIVVWDAENHIDIKK</aaseq>

Gene Sequence

<dnaseqindica>1..70#1152..1237#1390..1466#1570..1664#2123..2192#2378..2447#2654..2727#2802..2844#3171..3252#3636..3724#3814..3899#4140..4200#4722..4828#4913..4971#5060..5118#ATGGCCGCGGCGGCGATCCACCAGTTCGCCGAGTGCATCACCTGCCACGCGTGGAGCCCCGACCACTCGAGTAATCACCCCTCCTCCTGCTCCTCCTCTCCTTCCCCCCTCTCTTCTCTAGATCTCGCGCCCTCCGCGGTGTTCCCGTTTGATTCGATTCTGGATCGCCGGCCATGGCGTACGACGCTGGCTACGAGTGCGTGCGGTCGGTACGGGTGGGATTCGCGACCGCGTTTTTCTAGGGTTTCCGCCTGCAAATGTGATTGAGCTCCGTTTCGAATCCCCCCGGTAGGAATCGGTTGTCGTTGCTGCTCATTTCGTGGAGATGAGGGATGTCCCTCTCTATCTTCGATCCGTGGTGTTGCTGGTTTTGGTGCCAGCGGTGGCGTTTCCTGCTGATGTATGGGTTTCTGTAGAACAAATGCCTTGCTAAGGTGGTTTCGGTATTAGGGTGATACTAGGAGACATGGATCGCGTCCGTAACACACGTTTACATCATGGATTTCCCCTCGTAGGTGGGCGCTATATGTAATTTGAAATTTACTGACTTGGTTCTTTGAATTATGACCTGAATAATTCCATGTTTCCTGTGAATTTTACCTGCCACTCCATTCCCTGCACCATATTTGAATGGGAATTTCTTGCTACATAGCGCTAGCTCTTGTTCTGTCATGCACTGGTAAATGAATGCTCTCATCCATGGTAACAACCAGTACATTATACATGGCACCCACATGATTGTTATGGAAAATGAAGTAGGCTTCCTGCAATTATATATAATGTTCTTCAGTTCTCCTCTAGTGTAAGCCCAGGTTGCTTGTCTGCTGCTGATAGAGGGATAGATGAAACTACTGAACTCTGCATAATGTAGACTTGAACAGAGGGCTATACTCTTTCGTGCTCGCTTGATGTGTGCTAGTCCCATTGGAGGGGTGAGCAATACATTAGATTTCTGTTCATACTGACCATAGATGATATATTATCTGCTTATATGGCAAAACACCTACTGTAATTTAAGAATACAGCATTTCTTGCCTTGTAATATGAGACACTGTTACATCCCTCTAGAATGATGCCATTTCCCTTTTTTATGATGCACATCCCATGCCATCTTATTTTTAACTTGACATGTAACCTTTTCTCTCTTTCAGTGATTGCCTTTTGTCCAAACAACAATGAAGTACATATCTATAAGTTTTTTACTGACAAGTGGGAGAAACTTCATGTTCTTTCAAAGGTAAATGTTCTTATTTATATTTTACAAGTGCGATGATCTTGAGCACCTCTCTCTCTCTCTCTCTCTCTCTCATCATCTTTTTACAATGCAGTACTGTATAATCGATAGTTGATTCATTATCTTATTATTTTTGCTATTGCTATATCTTGCAGCATGATCAAATAGTATCTGGAATAGATTGGAGTAGATCTTCCAACAAGATCGTAACGGTCTCACATGATAGAAATTCGTAAGTACACATCAAGTCTCAATTTTCTTATTATGAATCACCTTCCTATTCCACAAGGGTATAAATACATGTTGGTCTCCTTTTTTCCTTATATGAACTGCAGATATGTTTGGACACAAGAGGGCCATGATTGGGTTCCTACCCTTGTTATTCTCAAGGTAAATCGTGCAGCTTTATGTGTCCAGTGGAGCCCAAAAGGTTCTCTTTATAACCTGCCTGGATGCTTACTGGCGCATTGGATTTTTCTACTCCCGTTGCTGAATCAATATATTCTCTTTATAACCAGTGTATATGCTTTATAGTTCTTTACTCTCTCAGATACAAATATAAATCGTGCAAGCCTAATAAACTCTTTCCCAAATATTAGTCATCTTAGAACCTCTAAGCACTTTCCCTCTCTTCTTTCCTTACCCTTACTTAAAAACTGCCACTACACTACTCATGAATAATTACAACTGCACAAGTCATAACTTGTAAGTTCCTTAGCCTTAATTATGCTTTAGATGAGATGTTCAGATGCATTAGTTTGTCAGATTGTCTCAACCGTGCTGCCATATTTGTTGGCAACAAAATGTGTGAAAAACGGATGCTTATAACCTGAAGTGCAGTATCATGAAGAAAACAAGTTTTTGAAGTTCATTTTATATTGTTTGCAGAAAACAAGTTTGCCGTAGGAAGTGGTGCTAAGTCTGTGTGCATTTGCTACTATGAACAAGACAACAACTGGTAATTGTGTCTGCTACCTGTATTAGTTGACTGCTACTTTTGGATTTCCTTAGTTTTACGTTAGCTACGTCAAACATTACAACTGGGTTGTATGTTTTCTACTGATATAGTTCATGCAAGTAGGTAGGTTGATGTGCCACTCTTGATATGTATTTTTCTTAACTGCCTGGATCCTTCACCTACAGGTGGATTAGCAAGGTTGTTAGGAAGAAGCATGAATCTTCTGTCACTAGTGTTGCATGGCATCCAAACAATGTAAGCGTCTCTCTTTATATTGTGCTTTCATTACAGCTGTGTTTTTCTTTCGTTTTGCTTTTTTTCTTGTACTTGTGAGATGCATATCTCCCAATCCCACCACTATGCAATTCTGCTTGGTTTATACACGCAACATCTATGTATATGTGGGACCTGTTTTTCTTTGGAGGCAATATTTTATTTTGCTTGCTTTCGCGTTTCTTCAGATACTTCTTGCAACAACATCAACTGATGGTAAATGCAGAGTGTTATCCACTTTCATCAAGGGTGTCGATACAAGGTGGACCTTGCTGTTCTTATGCCTATCAGGATCTTCTAAATATTTTGTTTATCTCATAGCTTTTTCTTGACCAGGGGATCACATGCGAGCACTTCTACTGATTGGAAATTTGGAGAGGTATTTGCCATTTCTTAGACCATTAATGCATAGTGTTCCACTGTTCCTTCTGTTGGAATGAAAATGTCTTACGATATATCCCTTTGCGATTTTCAAATATGCCTCTCCATTTTGTCACCACACAACTTCTTAGGCTAATTATACATTTTAGCATCAGCATCAGTGTTTTTTTATTAAATACTCCATTAACTAAGAACTTGAGAACTCATTATGATTCACAACCCTTGGCAAGGCATACTATCCTTATATTAGCTGCTATAGCATTTTTTGTTTCCTGTCAAAGTGCTGATCATCCTTGTAACATTTTTTCTGCTATGTGGTTGCAGCAAATTGCTCAGCTTGACCTATCATCTATGTGGGCATTTGGTGTAAGGTGGTCGCCAAGTGGAAAGACACTAGCCTATGCAGGTTCTCCCTCCTACTTGTTTCTTCATCCTAAGTGTGTGTTTAACTCTCTATTTTGCTTTTGTTTACCACATCATCTCGCATGCATCATAGCCTCCTACCAACTTATACTTTTACATGTGAAAGGTTCTCTTCATTGTCGATATACTGTGGCACCTTGACTGACATAAGCTAGTTGAACTTCAATTAATAAAAACACTAGCCAAGGCCTCTGCGTAGTTCATCTTTTGTCCTCTCCAGTATTTTGAGCTCCGTTGAGATTATGACTTGTTTCTTCAATTTTTATTTCCCACAGATGGGACACTATACCCTCTGATATATCCACAGATAAGATAATTTTCAATTATTTACATATATTGACTTGTTTGTTATTGTCTGATTGCTAGGGCACAATTCCATGATTTATTTCATTGATGATGTTGAAACGTCTCCTGCTGCACAGAATTTAGCACTGCGTGATCTGCCTCTCCGTGATGTGGGTCAGCATTTTCCCTTCTGCTAGTATTTATTTGCATGCTATAATTCCATGTTCCATAATATTGGGTGAACTCCACAAAATTTCAGATTCTTTTTCTTTCTGAAAGGACGGTGATTGGTGTTGGATTTGATTGCAATCCTATGATCTTTTCTGCAGATGAGACTGGACTTTGGTAAGCAAAGATGTAGATAGCAAATTAGCAACTTGTTAAAGTGGTTGCATTTTCCTTTTTATTCCGACAGTGCATTGTTATGAGCACTTGCTTCTTCCTGTTAAAAACATCTGATTTCTAGCTGCCTAGCTTCACCTTAATAGTTAAGGCACTTTAACCTTTTTTTCTTAAAAAACATCTTGTTTCCTAAGAGTTCCATGACCATTATTTTAGGTTAATATATATGTTTGTCTCTCATAGGAGCTTTGTCAGATACTTGGATGAAAGAAAAGTAACTACATCAACTTCAAGAGCTTCACAGGTTTCCTTTCTCCCTCCCTCTCATTACTTCATGTTAATGCAGGATTTCATCGTGTCATTCCTTGCTGTTGTGCTGTTATATGCAGCTGCTATCTACTATTTACTATGTTCACAAGGTTCTATCGTCATGTGTATTTAGGCGAACACTATATAGCGCAGCCCATGGTTGGAAGTACAGTCTATTGGTTATATAAAAAAAAGTGGATTTTCAGTTTACAAAAAGATATTTACATCTCTGGTTTCAGTAATTGAAATGGAATTATCCTTGGTTGGAAAAGAAAAACATTCTTGTCTTCAGCATTTTAAACCTGAACTATTCACCCTTTATTATCAGTGCAACCTCAAGTCTATATAGAGTCTATCTGCTCAGTTCTTTTTAGCTGAGGCAGTAGCATTAACACAAGTATCCTATTGATCTTTGCCTTCAGTTGTGAATACAATAATCAGAACAGGTGGTCCATGGTTATTTGAATAACTTGCGATTCCACAAGAACTAACATCAGAATAAAATTTATGTATCAGCTATCTGAAGCCTTCGGAAAGCTATATGGCCAATCAAAGCAAGTGGCAAGCAGTGATACTGTTGAACCATCAAAGCCTCGTGGTGGTGTTCATGAGAATTGCATAACGTACTACCCTCTACTTCCATTTTGCAGTTCAAAAGCGGACTCTTATCAGTTGCATATAGACTAATAATTTCGTAAATTTCACAGTTGCATCGTGCCATTGAGAAAAGGAAACGACAGTATTGTCAAACGGTTCAGCACGTCAGGTTTAAAACATTTCTATGTTGACGGCCTAAATTCTCCAGCTTTATGTTCAGGCAGTCTATGTTAACATTCTGTACTCCGTTATTGCAGGATTGGATGGTAAGATTGTGGTATGGGATGCAGAAAACCACATCGACATTAAAAAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005361

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA005361&oldid=58913"