BGIOSGA005369

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Revision as of 02:21, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005369| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005369, complete gene.| tag = P0643F0...")
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Gene Name

BGIOSGA005369

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005369, complete gene.

LocusTag

P0643F09.9-1

Ensembl Transcript ID

BGIOSGA005369-TA

Ensembl Protein ID

BGIOSGA005369-PA

Length

2527

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:37066385..37068911

Sequence Coding Region

37068872..37068911,37067761..37068150,37067444..37067684,37066385..37067072

Genome Context

<gbrowseImage1> name=IndicaChromosome02:37066385..37068911 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:37066385..37068911 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGATGGGCGAGAGCGAGCAGTTACCGCGTGCAGGCGTGGCAGATCAACTTTGTCTGTTAGCAGGGTGAGCTCTGCATCGGCGTCAATGCTCTCAACAGTGGCAACTTGCACAACATCAGTAAAGACATTTTCACTTTCCCAGCTTGAAAAGGCCACTGATGGTTTTGATTCAAAAAGAGTGTTGGGTCAAGGTGGGTTTGGACGCGTCTACCATGGGACCATGGATGGCGGAGACGAGATTGCTGTTAAATTGCTCACAAGAGAAGACAGGAGTGGCGATCGAGAGTTCATTGCGGAGGTTGAAATGCTCAGTCGACTACATCACCGTAATCTTGTCAAATTGATTGGCATTTGCATTGAGCACAACAAAAGGTGTCTTGTTTATGAGCTTATACGCAATGGAAGTGTTGAATCTCACCTTCATGGTGCTGATAAGGCTAAGGGCATGCTGAACTGGGATGTTAGGATGAAAATTGCTCTGGGTGCAGCTAGAGGCTTAGCATATCTACATGAAGACTCAAACCCTCATGTTATACATCGTGACTTCAAGGGCAGCAATATATTGTTGGAGGAAGATTTCACTCCTAAGGTTACTGATTTTGGTTTAGCAAGGGAGGCAACTAATGGAATTCAACCCATTTCTACTAGGGTAATGGGTACTTTTGGGTACGTTGCTCCAGAATATGCCATGACCGGGCATCTTCTTGTGAAGAGTGATGTCTACAGTTACGGTGTTGTCTTGCTGGAGCTTTTATCAGGAAGGAAGCCCGTATGCATGTCTGATACCAATGGTCCTCAGAACCTTGTGACTTGGGCTCGTCCTCTGCTATGCCATAAGGAGGGTTTGGAGAGGTTGATCGACCCTTCTCTGAATGGCAATTTCAACTTTGATGATGTAGCTAAAGTAGCATCCATCGCTTCCATGTGTGTTCACAATGATCCGTCACAGAGGCCATTCATGGGTGAAGTAGTGCAGGCACTGAAGCTTATTTACAATGATGCGGAGGCGGCTTGCGATGATTCTTACAGCCACAGGGACTCATCGTGTGACCAGTACGATGACTACCATGGGGCCCTGGCCCTTGACAGCGGTAGTGGTAGCTGGTGGAATAGAAGCTCAAATCCTTCTGGGTTTTTTGACAACCGGAACCCCCTACCAGTTATTACCATGGAATACAGCTCTGGCAGGATCGAAGGAGCGCGTGACCCCCGCTTTGCATTGTCAACAGGTGGTCATGCACAATCACCAGCCCTGCAGAATAGATCAGGACCCATCCGGATGAAGAAAAAGCTTGCCTCATTTTACCGGTCTAGAGGTAGCTTCAGCGAGCATGGCCAGCTGCCTCGCCATTGA</cdnaseq>

Protein Sequence

<aaseq>MEDGRERAVTACRRGRSTLSVSRVSSASASMLSTVATCTTSVKTFSLSQLEKATDGFDSKRVLGQGGFGRVYHGTMDGGDEIAVKLLTREDRSGDREFIAEVEMLSRLHHRNLVKLIGICIEHNKRCLVYELIRNGSVESHLHGADKAKGMLNWDVRMKIALGAARGLAYLHEDSNPHVIHRDFKGSNILLEEDFTPKVTDFGLAREATNGIQPISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVCMSDTNGPQNLVTWARPLLCHKEGLERLIDPSLNGNFNFDDVAKVASIASMCVHNDPSQRPFMGEVVQALKLIYNDAEAACDDSYSHRDSSCDQYDDYHGALALDSGSGSWWNRSSNPSGFFDNRNPLPVITMEYSSGRIEGARDPRFALSTGGHAQSPALQNRSGPIRMKKKLASFYRSRGSFSEHGQLPRH</aaseq>

Gene Sequence

<dnaseqindica>1..40#762..1151#1228..1468#1840..2527#ATGGAGGATGGGCGAGAGCGAGCAGTTACCGCGTGCAGGCGTACGAGAGGAGCGCCCCGACGGCTTGCGGCCGGCGACGGCGAGGCGGCGGCGGCGGAAGCGGGGACGAAGAGTGGGCGGGAGCACGTCGCCATCGATCTCCCCTTCTCCGCACCCGATGAGCTCTCCTCTCCAATGGCGATGAAGCAAACTGGAGGCCTCCGTTTTTCTCCCGGCTCACAAGTCGACTAGAAANTTGTAAAATCAAATTAAAATTCTTTTTTGGAAAATTTTGAGAAATTTTGGGGCTGAGAGATGAATGGATAATGGCCGCGGAGTTGGCCTCCCTTCCACGTGGCCTGCACTTTTTTCGGCTGAGTGGATGTGTGGTTAGCCACGCAACTTTCCCTGGATCGAAAGCGATGGGCCGTTGGATTGGGCCCCAGCGCGAAGCGGACGGCTATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGATCATGTACATTTAGATTGAGCATTTCCATGGATAAACTAAAATATTTATACTCAGNTTGCAATAAGAAGTATGTTTGACTACACACACTATTTAGAATAGTATGAGAAATGGCTTCAGACAGTCTTCTCACGGCCTTTATATGTCTATGTGCTTTTGCTTCACTTTTTGGTCAACAAATTTGAAAATTTTCACTTTTCAGTACACTAAACTGTTGCAATGTAAACTCTCCAGCTATAATAAACAGCTTTTATGTGTAATGTAGGTGGCAGATCAACTTTGTCTGTTAGCAGGGTGAGCTCTGCATCGGCGTCAATGCTCTCAACAGTGGCAACTTGCACAACATCAGTAAAGACATTTTCACTTTCCCAGCTTGAAAAGGCCACTGATGGTTTTGATTCAAAAAGAGTGTTGGGTCAAGGTGGGTTTGGACGCGTCTACCATGGGACCATGGATGGCGGAGACGAGATTGCTGTTAAATTGCTCACAAGAGAAGACAGGAGTGGCGATCGAGAGTTCATTGCGGAGGTTGAAATGCTCAGTCGACTACATCACCGTAATCTTGTCAAATTGATTGGCATTTGCATTGAGCACAACAAAAGGTGTCTTGTTTATGAGCTTATACGCAATGGAAGTGTTGAATCTCACCTTCATGGTATGTTCTAAATATTTGTTACTCTGAGCCATGCCAACAAAGTGCTTTGTGCTAACCGATTCTCTTTTTTTAAAAGGTGCTGATAAGGCTAAGGGCATGCTGAACTGGGATGTTAGGATGAAAATTGCTCTGGGTGCAGCTAGAGGCTTAGCATATCTACATGAAGACTCAAACCCTCATGTTATACATCGTGACTTCAAGGGCAGCAATATATTGTTGGAGGAAGATTTCACTCCTAAGGTTACTGATTTTGGTTTAGCAAGGGAGGCAACTAATGGAATTCAACCCATTTCTACTAGGGTAATGGGTACTTTTGGGTAAGGCACATTTTGCTTATATCCATCTGCTATGATGATGTCATTAATTGTTATTTCAATGGATAAAAGTGATACGCAATCTTCATTCTTTTATATTTGGTGAAATCATGCCCCTTTTGTGGTTATTACTAATCTTCCTTCCTAATTTCGTTCTTTTTTGTTGCTGTTGTAAATAGACTTAGAATTTTGTTGATTATTTCCAAATTCCAAGTATGGTTCTTCATGCTATTTTAATGTCAAAACAATACCAGTCTCTTGCAGAGTTTTTGACAAACCACACCTTTCTAGGATAGACAAAATGTAACTTGCTGCTGAATTTCATTTAATTACTCCCTGTCCCATAGAAGTTAATTTATTATTTGATCGAACAGGTACGTTGCTCCAGAATATGCCATGACCGGGCATCTTCTTGTGAAGAGTGATGTCTACAGTTACGGTGTTGTCTTGCTGGAGCTTTTATCAGGAAGGAAGCCCGTATGCATGTCTGATACCAATGGTCCTCAGAACCTTGTGACTTGGGCTCGTCCTCTGCTATGCCATAAGGAGGGTTTGGAGAGGTTGATCGACCCTTCTCTGAATGGCAATTTCAACTTTGATGATGTAGCTAAAGTAGCATCCATCGCTTCCATGTGTGTTCACAATGATCCGTCACAGAGGCCATTCATGGGTGAAGTAGTGCAGGCACTGAAGCTTATTTACAATGATGCGGAGGCGGCTTGCGATGATTCTTACAGCCACAGGGACTCATCGTGTGACCAGTACGATGACTACCATGGGGCCCTGGCCCTTGACAGCGGTAGTGGTAGCTGGTGGAATAGAAGCTCAAATCCTTCTGGGTTTTTTGACAACCGGAACCCCCTACCAGTTATTACCATGGAATACAGCTCTGGCAGGATCGAAGGAGCGCGTGACCCCCGCTTTGCATTGTCAACAGGTGGTCATGCACAATCACCAGCCCTGCAGAATAGATCAGGACCCATCCGGATGAAGAAAAAGCTTGCCTCATTTTACCGGTCTAGAGGTAGCTTCAGCGAGCATGGCCAGCTGCCTCGCCATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005369