BGIOSGA005375

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Revision as of 02:21, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005375| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005375, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA005375

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005375, complete gene.

LocusTag

OSJNBA0053L11.39

Ensembl Transcript ID

BGIOSGA005375-TA

Ensembl Protein ID

BGIOSGA005375-PA

Length

3856

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36987142..36990997

Sequence Coding Region

36990938..36990997,36990595..36990821,36989859..36990311,36989243..36989627,36988977..36989084
,36988190..36988390,36987985..36988083,36987424..36987597,36987142..36987342

Genome Context

<gbrowseImage1> name=IndicaChromosome02:36987142..36990997 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:36987142..36990997 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCTAAGCCAGGGCCTCTCACTCAGTGGCCGTGGAATAACCTTGGAAACTACAAGTACGCGCTGGTGGCGCCGTCGGCGGCGTACAGCACGTACAGGTTCGTGACGGCGAGCAGCGCGGCGGAGCGAGACCTCCTCAACTTCATGGTGTTCCCCATGCTGCTCCTCCGTCTTCTCTACGGCCAGCTCTGGATCACCGTCTCCCGCCACCAGACTGCCCGGAGCAAGCACAAGATCGTCAACAAGAGCCTCGACTTCGAACAAATCGACAGGGAAAGAAACTGGGATGACCAGATAATCCTGACGGCGCTGGTGTTCTACTTGGTGAGCGCGACGATGCCGCAGGCGCAGGTGGCACCGTGGTGGAGCACAAAGGGGATGGTGGTGACGGCGGTGCTGCACGCGGGGCCAGTGGAGTTCCTCTACTACTGGCTGCACAGGGCGCTGCACCACCACTGGCTGTACGCGCGGTACCACTCGCACCACCACGCCTCCATCGTCACTGAGCCCATCACCTCCGTCATCCACCCCTTCGCCGAGGAGGTCGTCTACTTCGTCCTCCTCGCCATCCCCATCCTCAGCACCGTCGCCACCGGCACCGTCTCTGTCGTCACGGCCAACGGCTACCTCGTCTACATCGACTTCATGAACTACCTCGGCCACTGCAACTTCGAGCTCGTCCCCAAGTGCCTCTTCCACGTCTTCCCCCCTCTCAAATACCTCCTCTACACCCCATCGTTTCATTCGTTGCACCACACGCAGTTCAGGACGAACTACTCGCTGTTCATGCCGGTGTACGACTACATCTACGGGACGACGGACAAGTCAAGCGACGAGCTGTACGAGAGGACGCTGCAGGGGAGGGACGAGGCGGCGTGGCGGCCGGACGTGGTGCACCTCACGCACCTCACCGCGCCGGAGTCCGTCTTCCACAACCGCCTCGGCTTCGCCGCCGTCGCGTCCAACCCGCTTGGCGCCGCAGCCTCCGGCCACCTCCTCCGTGCCGCCTCCGCCGTCGCCTCCCCTCTCCTCTCCCTCTTCGCCTCCACCTTCAGGTCGGAGGCCAACCGCCTCGACAAGCTCAACATCGAGACCTGGGTCATCCCAAGGTTCACCTCCCACTATACGTCGAAGAGTGATGGGTACAAGGTCAGCCGTTTGATAGAGAAAGCGGTGTCAGACGCAGAAGCAAGTGGCGCGAGAGTCCTCACGCTCGGCCTCCTCAACCAGGGGTACGATCTGAACAGGAACGGGGAGTTATATGTCGTCAGGAAGCCAAGCCTGAAGACGAAGATCGTCGATGGAACAAGCCTCGCTGTTGCTGCCGTTCTCAACATGATCCCTCAGGGCACCAAAGATGTGCTCCTCCTGGGAAACGCGAACAAGATCTCTCTCGTTCTTACCCTGTCCCTCTGCAAGCGGGAGATCCAGGTGAGGATGGTAAATAAGGAGCTGTATGAATGCCTGAAGCAGCAGCTGCAGCCTGAAATGCAGGAGCATCTGGTTTTGTCACGCAGTTACAGCAGCAAGGTGTGGCTCGTGGGCGACGGGGTGACGGATGAGGAGCAGATGAAAGCCCAGAAAGGATCCCATTTCGTGCCGTACTCGCAGTTCCCTCCCAACAAGGCCCGCAACGACTGCGTCTACCACTGCACCCCGGCTCTACTCGTCCCTGAATCCTTCGAAAACCTTCACGTTTGCGAGAATTGGTTGCCGAGGAGGGTGATGAGCGCGTGGCGGGCGGCGGGGATCGTTCACGCGCTGGAGAAGTGGGACGGGCACGAGTGCGGCGGCAGGGTCACCGGCGTGCAGAAGGCGTGGAGCGCGGCGCTGGCACGGGGATTCCGGCCATACGACGACCACCACCACCCCGGCATCACCCATGATGGCCGTGGCGGGCTGTGA</cdnaseq>

Protein Sequence

<aaseq>MASKPGPLTQWPWNNLGNYKYALVAPSAAYSTYRFVTASSAAERDLLNFMVFPMLLLRLLYGQLWITVSRHQTARSKHKIVNKSLDFEQIDRERNWDDQIILTALVFYLVSATMPQAQVAPWWSTKGMVVTAVLHAGPVEFLYYWLHRALHHHWLYARYHSHHHASIVTEPITSVIHPFAEEVVYFVLLAIPILSTVATGTVSVVTANGYLVYIDFMNYLGHCNFELVPKCLFHVFPPLKYLLYTPSFHSLHHTQFRTNYSLFMPVYDYIYGTTDKSSDELYERTLQGRDEAAWRPDVVHLTHLTAPESVFHNRLGFAAVASNPLGAAASGHLLRAASAVASPLLSLFASTFRSEANRLDKLNIETWVIPRFTSHYTSKSDGYKVSRLIEKAVSDAEASGARVLTLGLLNQGYDLNRNGELYVVRKPSLKTKIVDGTSLAVAAVLNMIPQGTKDVLLLGNANKISLVLTLSLCKREIQVRMVNKELYECLKQQLQPEMQEHLVLSRSYSSKVWLVGDGVTDEEQMKAQKGSHFVPYSQFPPNKARNDCVYHCTPALLVPESFENLHVCENWLPRRVMSAWRAAGIVHALEKWDGHECGGRVTGVQKAWSAALARGFRPYDDHHHPGITHDGRGGL</aaseq>

Gene Sequence

<dnaseqindica>1..60#177..403#687..1139#1371..1755#1914..2021#2608..2808#2915..3013#3401..3574#3656..3856#ATGGCCTCTAAGCCAGGGCCTCTCACTCAGTGGCCGTGGAATAACCTTGGAAACTACAAGGTACTAAATTATGTTTTATCGTCATCATCAGATTTGATTTGATGCCATACGTTGTTTGTAAGCTGATTGCAACAATGTGAGTAATTAACGACTGTTGCGTACGTGGAAATCTACAGTACGCGCTGGTGGCGCCGTCGGCGGCGTACAGCACGTACAGGTTCGTGACGGCGAGCAGCGCGGCGGAGCGAGACCTCCTCAACTTCATGGTGTTCCCCATGCTGCTCCTCCGTCTTCTCTACGGCCAGCTCTGGATCACCGTCTCCCGCCACCAGACTGCCCGGAGCAAGCACAAGATCGTCAACAAGAGCCTCGACTTCGAACAAATCGACAGGGAAAGAAACTGGTAATTAATCGATCAAATTGAGTGTACGTCCAAGGAACTGTTTAGTCGGTGAAATGAAAATTTCGGGTGTCACATCTTTTGAGATTTTGCTTCAGTCTAGCGAAAAGTACCTTAAAGTAACGGTATATCACGGTACTAAATCGTTTTTGTTCGTTGAATCAAAGTGGACAGGATGGACAATATTAGATCCAACTATCAAAAACGACACCTCGAGATACTTTTCGTTAGACTGGAGCATATCTCTAAGTTTTTTGGGTTTTCATATTTACATATATGGATGCAGGGATGACCAGATAATCCTGACGGCGCTGGTGTTCTACTTGGTGAGCGCGACGATGCCGCAGGCGCAGGTGGCACCGTGGTGGAGCACAAAGGGGATGGTGGTGACGGCGGTGCTGCACGCGGGGCCAGTGGAGTTCCTCTACTACTGGCTGCACAGGGCGCTGCACCACCACTGGCTGTACGCGCGGTACCACTCGCACCACCACGCCTCCATCGTCACTGAGCCCATCACCTCCGTCATCCACCCCTTCGCCGAGGAGGTCGTCTACTTCGTCCTCCTCGCCATCCCCATCCTCAGCACCGTCGCCACCGGCACCGTCTCTGTCGTCACGGCCAACGGCTACCTCGTCTACATCGACTTCATGAACTACCTCGGCCACTGCAACTTCGAGCTCGTCCCCAAGTGCCTCTTCCACGTCTTCCCCCCTCTCAAATACCTCCTCTACACCCCATCGTACGTATAAATTTACCCGTTTAAAAATATATTGCTATTTAGCGCAATGTTGGTTATTTTAGTACACCTTTTTTTCTTTCTGAAAACTTTCATTCAAAAAACTTATATTGGAGAACTTTTACATGAAAATACTTTTATATGAAAAAGTGTACAGTGAGAAATATGAGTAATAATTAATTATACTAATTAACTGCTAATAGAGATCATTAATTAGTGTATGTATGTATGTAGGTTTCATTCGTTGCACCACACGCAGTTCAGGACGAACTACTCGCTGTTCATGCCGGTGTACGACTACATCTACGGGACGACGGACAAGTCAAGCGACGAGCTGTACGAGAGGACGCTGCAGGGGAGGGACGAGGCGGCGTGGCGGCCGGACGTGGTGCACCTCACGCACCTCACCGCGCCGGAGTCCGTCTTCCACAACCGCCTCGGCTTCGCCGCCGTCGCGTCCAACCCGCTTGGCGCCGCAGCCTCCGGCCACCTCCTCCGTGCCGCCTCCGCCGTCGCCTCCCCTCTCCTCTCCCTCTTCGCCTCCACCTTCAGGTCGGAGGCCAACCGCCTCGACAAGCTCAACATCGAGACCTGGGTCATCCCAAGGTTCACCTCCCACGTACGTAATTTTGACTAATTTTTAAATACAAATATACTCATACAAATCTCCATTTCTTTAAGTATTTTTTTCTCGTACAAATATACGTATAGTTTGGAATGTTTGTTTTTGTGTATGAGGAAATAGTGAATTAATTGCGTGCATTGATGGAATCGCAGTATACGTCGAAGAGTGATGGGTACAAGGTCAGCCGTTTGATAGAGAAAGCGGTGTCAGACGCAGAAGCAAGTGGCGCGAGAGTCCTCACGCTCGGCCTCCTCAACCAGGTAAATGCATTCGCTGACCCACCTGACAGATCCAATTCATTGCATGCCTTCTCACTGTTCGCCGGCTTTAATGTAACAGTACCAGCAGTAGGTGCAACTTCGTAGCATCACTCTTTCCTCTCTGCACTAGCTCCCCAAGCAGTTACATGGGACCGAATTCACCTACCAAGATTTACAAAATTTATTAGGCTGTGTTTAGATCCAAACTTCCAACTTTTTCCATCACATCAACCTGTCATACACATATAATTTTTCAGTCACATTGTACCAATTTTAACCCAAACTTTCAACTTTAGAAGGAACTAAACACAGCCTTACTAGCATCAGACAGTATAAGAATTTTTTTTTCATGTTTCTCAAAATATATCTGGACATCAGTTGAAAACGTGCATAAATGCTTATACACCATTTTGGAATGGATGGGGTAATAAATTTCAGCAGCCAGAGGTTCATATGACAGTGGCACTTTTTACTTCAAGAGAAAAAGGAACAGTGTTTAGCAAATGTTCGCCCCATAAATCTGCTTTGGTCCTGCACGGGTATATGTCAGGCGATGCTAATTAAATCGATCCAATTGTACGTGCAGGGGTACGATCTGAACAGGAACGGGGAGTTATATGTCGTCAGGAAGCCAAGCCTGAAGACGAAGATCGTCGATGGAACAAGCCTCGCTGTTGCTGCCGTTCTCAACATGATCCCTCAGGGCACCAAAGATGTGCTCCTCCTGGGAAACGCGAACAAGATCTCTCTCGTTCTTACCCTGTCCCTCTGCAAGCGGGAGATCCAGGTATAATACCAAAATGACAGTACTCGACCAGTTAATATTCTTAACAGTATCGATCACGGTGATTAAAAAGGTTACTGGCTGTAACTAATTTCGAACAAAAAAACAGGTGAGGATGGTAAATAAGGAGCTGTATGAATGCCTGAAGCAGCAGCTGCAGCCTGAAATGCAGGAGCATCTGGTTTTGTCACGCAGTTACAGCAGCAAGGTAATTGAAAATTGGTCCTGTTTGGATCCGAAGGGCTATTAAATAGCCCTTCAGGATTTTGCTATTTAAGAGTATTAAACGTAGATTACTGACAAAACCCATTTCATAACCCCTAGGCTATTTTGCGAGACAAATCTAACGAGGTATATTAATCCATTTGCTACAGTAATCAGCCGCTAATTATGGATTAATATACATCATTAGATTCGTCTCACAAAATAGCCTAAGGGTTATAGAATCGGTTTTATCGATAATCTACGTTTAATAATCCTAAATAGTAAGATTCCAGAGCGCTATTTAATAGCCCGAAGGATCCAAACAAGGTCATTGTGGGTAACTGGACGTTGTGGCGTGGATGAAATAAATCGAAACTGCGTGCGTATGCAGGTGTGGCTCGTGGGCGACGGGGTGACGGATGAGGAGCAGATGAAAGCCCAGAAAGGATCCCATTTCGTGCCGTACTCGCAGTTCCCTCCCAACAAGGCCCGCAACGACTGCGTCTACCACTGCACCCCGGCTCTACTCGTCCCTGAATCCTTCGAAAACCTTCACGTTTGCGAGGTACTCCCTCTGTACCACTTACTTCGTCCGTCTCAGAATATAGTTATCTTTAGCTATGAATCTGAACACATATGCACGCAGAATTGGTTGCCGAGGAGGGTGATGAGCGCGTGGCGGGCGGCGGGGATCGTTCACGCGCTGGAGAAGTGGGACGGGCACGAGTGCGGCGGCAGGGTCACCGGCGTGCAGAAGGCGTGGAGCGCGGCGCTGGCACGGGGATTCCGGCCATACGACGACCACCACCACCCCGGCATCACCCATGATGGCCGTGGCGGGCTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005375

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