BGIOSGA005401

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Revision as of 02:21, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005401| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005401, complete gene.| tag = OJ1111_...")
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Gene Name

BGIOSGA005401

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005401, complete gene.

LocusTag

OJ1111_C07.20

Ensembl Transcript ID

BGIOSGA005401-TA

Ensembl Protein ID

BGIOSGA005401-PA

Length

3834

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36509620..36513453

Sequence Coding Region

36513178..36513453,36509620..36511515

Genome Context

<gbrowseImage1> name=IndicaChromosome02:36509620..36513453 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:36509620..36513453 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAGCAGATGGAGGAAGGCCAAGATGTCGCTGGGGCTCAACCTCTGCGTCTACGTGCCCAGGACGCTGGACGACGGCGACTCGCCGTCCACCGGGTCGTCCACGGCGGCGCTGGTGTCGCCGGTGGCGTCCTCGTCGTCGGCGGCGACCCGCGCCAACACCACGCCCACGGCGGAGCAGAGGGTCAAGGGCGCCGGCGCGCTCATGCCGACCACCCCGACGCCGACCTCCGCCGGACTTCGCCTCTCCAAATCCGGCAGCAAATCCTTCAAGAAAACATGTGCGATATGTTTGACCACAATGAAGCCTGGTCAGGGCCATGCTCTATTCACAGCAGAGTGCTCACATACCTTTCACTTCCATTGTATAGCTGCAAATGTTAAGCATGGAAGCAACAATTGCCCAGTTTGCCGCACCAAGTGGAAGGAACTCCCATTTCGAGGTCCCTTGCCTGGTGAATTTCCTCAAGGAAGTGCAAGGATTAATCCAGTTAATGGGCACCAAAATGGCGGGCAGATGACCATACTGCGACCACTTCCCCGTGCTCGTTCTTCTGGTCGGCTGCATCATATGACATCGTTGTTGCCTGACACTGACCGTAGTATTTTTAACGATGATGAACCCTTGGACTCACTGTCTGAAGCAAATGAAGGCTCGCAGCAGGGGTGTTTAAGAACAGTGGAAATAAAGACATATCCTGAGTTCACTGAAGTTCCAGAAAGTACTTCAGAAAGAAATTTTACAGTCCTAGTTCATCTAAAGGCACCCCTTGCTCAGACTTTGCAAACTAGCAGCAAACTTGAAGATGGCAATAGCTTGGGCACAACTCGAGCCCCTGTTGATCTCATCACAGTGCTTGATGTCAGTGGGAGCATGGCTGGTACCAAACTTGCATTGCTGAAAAGAGCCATGGGATTTGTCATTCAGAACCTTGGCTCCTCAGATCGGCTTTCTGTAATTGCCTTCTCATCATCTGCACGTAGACTCTTCCCCCTCCGTCGGATGACTGAGACTGGTCGTCAGCAAAGCTTGCAAGCTGTTTATTCACTGACATCAAATGGTGGGACCAATATTGCTGAGGGCCTGAGGAAAGGCTCCAAAGTGATTGAAGATCGACAGGCCAAGAATCCAGTGTGCAGCATCATCCTACTATCAGATGGGCAAGATACATATACAGTCTCACCAACCGCTGGTGTACACAAAGCAGCACCAGAGTACTGCTCACTCCTGCCATATACTAGTAATGGTTGTCAACAGGTACCAGTTCATGTCTTTGGATTTGGTGCTGACCATGATTCAGTCTCGCTGCATTCAATCTCACAAACCTCCGGGGGCACCTTTTCATTCATAGAGACAGAGGCTGCCATCCAAGATGCATTTGCCCAGTGTATTGGTGGACTCTTGAGTGTTGTTGCACAGGATTTGCATGTAAAGGTGGAGAGCCTCCACCCTGATGTACACTTTGGCTCGATCAGATCAGGAAGCTATTCTAGCAGACTTGCAGATGACAAGAGGAATGGCTCCATAGATGTTGGTGACATGTATGCCGAAGAGGAGAGGGATTTCCTTGTGTCAGTAAATGTTCCCCCAGGTTACGGTGAAACAGCACTTCTCAAAGTTGGCTGTGTCTACAAAGATCCACTGATGAAGGAGACTATCAATATGGCTGATGTGCAAGTCAAGATCTCTAGACCAGCATTCGTCTCAGTACAAAGCATGTCAATCGAGGTGGACCGACAAAAGAACCGTCTTCATGCAGCTGAAGTCATGGCTGAAGCAAGGTTGTCTGCCGAGCGTGGTGACCTGACACATGCTGTTTCCTTACTCGAAGACTGCCGGAGGATGATCATGGGGTCAACATCAGGACAATCCGGTGATCGGTTGTGCCAAGCATTGGATGCTGAGCTGAAGGAGATGCAAGAAAGGATGGCCAATCGCCAAAGGTACGAAGCATCAGGCCGCGCCTATGTCCTCTCCGGCTTGAGCTCACACTCATGGCAGAGAGCAACTGCGCGAGGTGACTTCACAGACAGCGAGAGCCTAATCCAGGCCTACCAGACTTCATCCATGGTCGACATGCTGCTGCGCTCGCAAACAATGAGCCGCTCCTCAACCCCTCGACAGATGAGGCATGTGAAGTCGTTTCCAGCGCGCCCGCAGCCTAGGTAA</cdnaseq>

Protein Sequence

<aaseq>MESRWRKAKMSLGLNLCVYVPRTLDDGDSPSTGSSTAALVSPVASSSSAATRANTTPTAEQRVKGAGALMPTTPTPTSAGLRLSKSGSKSFKKTCAICLTTMKPGQGHALFTAECSHTFHFHCIAANVKHGSNNCPVCRTKWKELPFRGPLPGEFPQGSARINPVNGHQNGGQMTILRPLPRARSSGRLHHMTSLLPDTDRSIFNDDEPLDSLSEANEGSQQGCLRTVEIKTYPEFTEVPESTSERNFTVLVHLKAPLAQTLQTSSKLEDGNSLGTTRAPVDLITVLDVSGSMAGTKLALLKRAMGFVIQNLGSSDRLSVIAFSSSARRLFPLRRMTETGRQQSLQAVYSLTSNGGTNIAEGLRKGSKVIEDRQAKNPVCSIILLSDGQDTYTVSPTAGVHKAAPEYCSLLPYTSNGCQQVPVHVFGFGADHDSVSLHSISQTSGGTFSFIETEAAIQDAFAQCIGGLLSVVAQDLHVKVESLHPDVHFGSIRSGSYSSRLADDKRNGSIDVGDMYAEEERDFLVSVNVPPGYGETALLKVGCVYKDPLMKETINMADVQVKISRPAFVSVQSMSIEVDRQKNRLHAAEVMAEARLSAERGDLTHAVSLLEDCRRMIMGSTSGQSGDRLCQALDAELKEMQERMANRQRYEASGRAYVLSGLSSHSWQRATARGDFTDSESLIQAYQTSSMVDMLLRSQTMSRSSTPRQMRHVKSFPARPQPR</aaseq>

Gene Sequence

<dnaseqindica>1..276#1939..3834#ATGGAGAGCAGATGGAGGAAGGCCAAGATGTCGCTGGGGCTCAACCTCTGCGTCTACGTGCCCAGGACGCTGGACGACGGCGACTCGCCGTCCACCGGGTCGTCCACGGCGGCGCTGGTGTCGCCGGTGGCGTCCTCGTCGTCGGCGGCGACCCGCGCCAACACCACGCCCACGGCGGAGCAGAGGGTCAAGGGCGCCGGCGCGCTCATGCCGACCACCCCGACGCCGACCTCCGCCGGACTTCGCCTCTCCAAATCCGGCAGCAAATCCTTCAAGGTACAGTCCCTCCTTCACATCCTTCACATCTCTATGTATGAAGCATAAAAAAAAAGAAAAGAAGCTTGCAACTTTGCAAGCAAAATTACAGCCAAGATCCATCCATATGCACACAAAAGTCACAAATTAATTCCTTTTTTTTCTCTCGATTTATGCCTGCTCGGTTGATTTCAGTTCCAGTAATTATTGTAGCAAGTTCTGATTCAGGTTGTACACCTGTGATGGATGTTCTTTTTTGCCACACATGATGCATGCAACTGTGCAAGTAGCTTTGCTTTCATGATTTCATCACACGCACACACACACACAAACACAGAGAGAAGATAAAAAAGAGGAGCTCAAGAGGAGAAAAGGAGATGCAGGAGAAGATGGGCAGAGGGCAATGGTGGAGGAGGAATATAATCATGAAGTGGGGGAGTTTGTCTTTCTTTAACGATGGGGTCCTCCTCTACTCTCTTGCAGCTCCACTCTCACTACTGACTATACTACTACTCTCCTCCTCCATAGTCCACACCTCTTTTCTTCATCACTCACTTTTCTCTGCCCTTTCCTCTAGCCTCCTCTCACTTCACTCCTTTTCGTGGAGGAGGCATAAAGAAGAGGTCAGTGCCATAGCCATAGCATCCTCTTTTCAGAACAGCTTGGAGTGGACACTGTTCCACACTGTTCTCAGATCCCTTCTGCGTTCTCTTGCTGTTCCAACTTAAAACTGCAGAGCCCACCACCCGTCTCGCTTTAAGAGCCCAGAATTGCAAAAGGAAACCTATATTCAGAAGGTGCCAGTTTGCAAATGTTAAAATTGCAAAATGAACCTATATTCAGAAGATGCCAGTTTGCAAATGTTAAAATTGCAGCAGCCTAGCTAATTATACCAAACCAGTGTACTGAAACTGAACAGGGACACGCTATTAGAGTCGTGTTTTTCAAATGTCTGTGGGTGGTCACTGGTCAACCATTTAATCTTCTGTTATAGAGGGTGAGGTGTGTTAGTTAGTCAGCAATGACTAATTCGGATTAAGCCACCTACCTCACTCGATAATGCTAAAGATTGTTTCTTCCATTTGTAAAATTAGCTTGACCATGGACTGCAACTTGCCACATGACTAATGATTGATGTTTTTTCTCCGAGACAAATTGTATTGCAATTCTCTTAGCAAGTTTGTTCTGAAAAAAGAGTCTGAAACTACGGCGTCTGACCAAGGTTTGGGATGAATATCTCTTTGGGGATAAAAAAAAACTCTGGACTTTTTCATCATTGTGAAAAAATATTTATGAAAAATAGAAGACGACAAGTGTGTAAAGGTCCAACTACATGCCTACACGTTTCTGCCTATGCTTTAGTTCTTTGGCATTCTTGATGTTGCTGCTTTGTGTTGTTAATTATTCGTAATATCTCTATTATATATTATAGAATGACCGCTTCAATAAATATAAATAAACTAAGTATGCTAGTATTTAGTACCTGATTAGAGATTATCACAGCATCATCTTCATGAATTATCCCTTTAATCTTGCTGTCTCTAAATGCTCGTTTGCTTTCTTTGCAGCATCACTGATAAGCATGTATTGTATACCATGGAAGCATGCATGCTAACCACTTCAAGTTTCATGTTTGACCACTGTTCATTTTATAATCTCACTGTACCTTCTTTTTTCTTCCAGAAAACATGTGCGATATGTTTGACCACAATGAAGCCTGGTCAGGGCCATGCTCTATTCACAGCAGAGTGCTCACATACCTTTCACTTCCATTGTATAGCTGCAAATGTTAAGCATGGAAGCAACAATTGCCCAGTTTGCCGCACCAAGTGGAAGGAACTCCCATTTCGAGGTCCCTTGCCTGGTGAATTTCCTCAAGGAAGTGCAAGGATTAATCCAGTTAATGGGCACCAAAATGGCGGGCAGATGACCATACTGCGACCACTTCCCCGTGCTCGTTCTTCTGGTCGGCTGCATCATATGACATCGTTGTTGCCTGACACTGACCGTAGTATTTTTAACGATGATGAACCCTTGGACTCACTGTCTGAAGCAAATGAAGGCTCGCAGCAGGGGTGTTTAAGAACAGTGGAAATAAAGACATATCCTGAGTTCACTGAAGTTCCAGAAAGTACTTCAGAAAGAAATTTTACAGTCCTAGTTCATCTAAAGGCACCCCTTGCTCAGACTTTGCAAACTAGCAGCAAACTTGAAGATGGCAATAGCTTGGGCACAACTCGAGCCCCTGTTGATCTCATCACAGTGCTTGATGTCAGTGGGAGCATGGCTGGTACCAAACTTGCATTGCTGAAAAGAGCCATGGGATTTGTCATTCAGAACCTTGGCTCCTCAGATCGGCTTTCTGTAATTGCCTTCTCATCATCTGCACGTAGACTCTTCCCCCTCCGTCGGATGACTGAGACTGGTCGTCAGCAAAGCTTGCAAGCTGTTTATTCACTGACATCAAATGGTGGGACCAATATTGCTGAGGGCCTGAGGAAAGGCTCCAAAGTGATTGAAGATCGACAGGCCAAGAATCCAGTGTGCAGCATCATCCTACTATCAGATGGGCAAGATACATATACAGTCTCACCAACCGCTGGTGTACACAAAGCAGCACCAGAGTACTGCTCACTCCTGCCATATACTAGTAATGGTTGTCAACAGGTACCAGTTCATGTCTTTGGATTTGGTGCTGACCATGATTCAGTCTCGCTGCATTCAATCTCACAAACCTCCGGGGGCACCTTTTCATTCATAGAGACAGAGGCTGCCATCCAAGATGCATTTGCCCAGTGTATTGGTGGACTCTTGAGTGTTGTTGCACAGGATTTGCATGTAAAGGTGGAGAGCCTCCACCCTGATGTACACTTTGGCTCGATCAGATCAGGAAGCTATTCTAGCAGACTTGCAGATGACAAGAGGAATGGCTCCATAGATGTTGGTGACATGTATGCCGAAGAGGAGAGGGATTTCCTTGTGTCAGTAAATGTTCCCCCAGGTTACGGTGAAACAGCACTTCTCAAAGTTGGCTGTGTCTACAAAGATCCACTGATGAAGGAGACTATCAATATGGCTGATGTGCAAGTCAAGATCTCTAGACCAGCATTCGTCTCAGTACAAAGCATGTCAATCGAGGTGGACCGACAAAAGAACCGTCTTCATGCAGCTGAAGTCATGGCTGAAGCAAGGTTGTCTGCCGAGCGTGGTGACCTGACACATGCTGTTTCCTTACTCGAAGACTGCCGGAGGATGATCATGGGGTCAACATCAGGACAATCCGGTGATCGGTTGTGCCAAGCATTGGATGCTGAGCTGAAGGAGATGCAAGAAAGGATGGCCAATCGCCAAAGGTACGAAGCATCAGGCCGCGCCTATGTCCTCTCCGGCTTGAGCTCACACTCATGGCAGAGAGCAACTGCGCGAGGTGACTTCACAGACAGCGAGAGCCTAATCCAGGCCTACCAGACTTCATCCATGGTCGACATGCTGCTGCGCTCGCAAACAATGAGCCGCTCCTCAACCCCTCGACAGATGAGGCATGTGAAGTCGTTTCCAGCGCGCCCGCAGCCTAGGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005401