BGIOSGA005405
| Gene Name |
BGIOSGA005405 |
|---|---|
| Description |
cDNA clone:J013094E21, full insert sequence |
| Definition |
Oryza sativa Indica Group BGIOSGA005405, complete gene. |
| LocusTag |
OJ1548_F12.25 |
| Ensembl Transcript ID |
BGIOSGA005405-TA |
| Ensembl Protein ID |
BGIOSGA005405-PA |
| Length |
5606 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 2:36446507..36452112 |
| Sequence Coding Region |
36451704..36452112,36451373..36451612,36451114..36451280,36450842..36451022,36450702..36450754 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome02:36446507..36452112 source=RiceIndica02 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome02:36446507..36452112 source=RiceIndica02 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGCGGCGCTCGTGCGGCCCGCCGTGCTGCCCGTCTGCGCCATGACGGGCGGCGGCGGTAACGACAAGCGGTCGCCGCCGCAGCAGCGGTCGTGGTGGGGCGGGAACAAGCAGAGATTGCCGCACCAGCCGCGGCGGCAGCCGGGCGGGAATGGTGGCCGAGGAGGAGGAGGAGGGGCGCTGGACCAGGTGCTCGGAGTGCTCCGCCGCGACGGCGAGTTCCTCCAGGCGGCAGCCGGCGCCCCCCTCCGCGACATCTTCTGGCTCCGCTTCCTCGAGAAGAAGAAGCAGCAGCGGCGGCGGAAGCAACCAAAACCTAAACCCAAACCTCCGGAGCAGCAGCAGCAGCAAGAGGAAGCGGCGGCGGCTAGCCAAGCCCCATCCTTCCCACCTCCCTCCTACCAGCCAGGATTATCATGCCTGGATCTTATGACTGCTGATTTCGAAGCCCTGAAGCTGTATATCGGCTACTCGAAGCATGCAATCGAGCAGCAATTTCTCAAAGGCAAGCGGCAACCTCAGCATCAGCAAACTCCTAAACCAAAACTCCAGCAACAGCAGCAGCAGCAGCAGAAGAAGCAGCAGCAACAAGAGCACCAGAATCAGACACTTCAACCTCCGGCCTTCCCTCCCCCATCGTACCCTCCAGGGCTGTCTTGTATGGAGCTGATGATGGCTGATATCGAAGCTCTCAAGTTGTACATCAACTACTATGTAGCCATTCTCACCACTCCTCTACCCCAGCATTACGATCCGGAGATACTGTCCCGTTACTTCACCTCGCGTCCTCATATTCTCGCATTTCGCACCATTCAGATAATCTTCGCATTTGTCTCGGCTGCAGTAAAGATGCAAATTTCTAAAAGAACAAACTTGATCACAGATGCCACCTACAGCGGTAATAGCACCGGAAGCAAAGGTTTCAATGCTTCACAATACATGGTTGGCCAGCTTCTCAAAGAGACATTTCTAGATCTTGGGCCTACTTTTGTTAAAGTTGGACAGTCCCTCTCAACAAGGCCTGATATCACAGGCTCGGAGATTTCTGAGGCACTCGCCGAGTTACATGAAAAGGTTCCTCCCTTCCCGAGAAAAGATGCAATGAAGATTATTGAGGGAGAATTTGAGCTCCCTGTATCACACATTTTCAGTTACATTTCTGATGAGCCTGTTGCTGCAGCTTCCTTTGGACAGGTTTATCAGGGACGTACAGTTGATGGTGCTCTTGTGGCCATAAAGGTTCAACGGCCTAACCTTCTTCCTTCAGTATTGAGGGACATTTATATTCTACGGCTTGGGCTTTCTTTTGTGAGGAAGGTAGCAAAGAGGAAAAGCAACATTGCCCTCTATGCTGATGAGTTGGGTAAAGGTTTTGTTGGCGAGTTGGACTACAATATTGAAGCTGCTAATGCTACCAAATTCCTGGAATATCATTCCAGATATTCATTTATGCTGGTTCCAAAGGTTCTCAAGCAACTTACGAGGAGAAGAGTTTTGACAATGGAGTGGGTATCTGGTGAAAATCCCACAGATTTGCTTTCCTTATCTAAAGGAATTTCATCAGAAATTGCTGAATCGTCAGAGAAGCAGAAGATCGAAGCAACAGCCCGTCTTCTTGACCTGGTCAACAAAGGTGTCGAAGCATCATTAGTGCAGCTCCTCGAGACTGGTTTGTTGCATGCTGATCCTCATCCTGGGAATTTGCGTTATACACCTGAAGGTCGTGTCGGGTTTCTTGATTTTGGTTTGCTTTGTATGATGGAGAAGAAACATCAGCATGCTATGCTTGCAAGTATCGTTCACATAGTAAATGGAGATTGGGCTTCTCTTGTTTATGATTTGACTGCAATGGATGTTGTTCCACCAAGAACTAATCTACGCCGAGTGACAATGGACTTGGAGGATGCGTTGGGTGAGGTGACCTTTGAAGATGGAATTCCAGATATCAAGTTTAGCAGGGTGCTTGGAAAAATATGGTCTGTGGCATTTAAATACCACTTCCGTATGCCGCCGTACTACACGCTCGTCCTGAGGTCACTTGCCTCTTTGGAAGGGCTGGCCATTGCAGCAGATGGAACTTTTAAAACATTTCAAGCAGCATATCCATATGTTGTGCGGAAGCTTCTATCGGATAATTCAGTTGCAACAAGGAGACTCTTGCATCAGGCTATTTTCAACAAAAGGAAAGAGTTTCAGTGGAACAAGATTACAGTATTTCTAAAATTAGCATCAGCAAGGGGTAACTTCAGGTATAATACTGGCGTTTTGCCTGAGAGGAAGGGTTTGGATGTTGCAAAACTTGTAGAGATCAGTGATGCATCTTCTTCACTCCATCTTAACCGTGCTACACCAGAAAGAGCACTACATACTGCAAATCTGTGCTTGCGGCTTTTACTATCGAAGGAGAGCATTGTGATAAGGAGACTTGTAATGACAGCGAACGCGAAGTCACTTGCTCGTGACCTGATCTCCAAAGATGCATCGATTTACCGGGTGCTCTTAAGTCGGGTACTTGCCGATGTCATCTTCCAGTGGATGGTGAAGGCAACTGGTTTTAAACGAGCCGGACAGCTCGAGCCTCACCCACGCGTGACAGCAGGAAAGAACGATGAAGACCTGGGGCTGTCCAAAGAAGCACCAGCCTTGGTGACATTCCAGACAGCAGTAAGAGATCGCAGGCTGAAGGTGATATTCTCCAAGTTCGTCAGGGACATAAGAGAGGACCCCATCCTGATGGTCAGAGTGAGCTGGAACATGTTTGCTATCTCGGTGGTCTCCGCTGCAATTGGCGTTCACCGTTTCATCGTCGTCTTGTCGGAGGAATTTCTGTCTACATTACCACCGCCTGTGCCTCCGCCGCGGCTAGTTCAGATTCAGAGCATATGA</cdnaseq> |
| Protein Sequence |
<aaseq>MAALVRPAVLPVCAMTGGGGNDKRSPPQQRSWWGGNKQRLPHQPRRQPGGNGGRGGGGGALDQVLGVLRRDGEFLQAAAGAPLRDIFWLRFLEKKKQQRRRKQPKPKPKPPEQQQQQEEAAAASQAPSFPPPSYQPGLSCLDLMTADFEALKLYIGYSKHAIEQQFLKGKRQPQHQQTPKPKLQQQQQQQQKKQQQQEHQNQTLQPPAFPPPSYPPGLSCMELMMADIEALKLYINYYVAILTTPLPQHYDPEILSRYFTSRPHILAFRTIQIIFAFVSAAVKMQISKRTNLITDATYSGNSTGSKGFNASQYMVGQLLKETFLDLGPTFVKVGQSLSTRPDITGSEISEALAELHEKVPPFPRKDAMKIIEGEFELPVSHIFSYISDEPVAAASFGQVYQGRTVDGALVAIKVQRPNLLPSVLRDIYILRLGLSFVRKVAKRKSNIALYADELGKGFVGELDYNIEAANATKFLEYHSRYSFMLVPKVLKQLTRRRVLTMEWVSGENPTDLLSLSKGISSEIAESSEKQKIEATARLLDLVNKGVEASLVQLLETGLLHADPHPGNLRYTPEGRVGFLDFGLLCMMEKKHQHAMLASIVHIVNGDWASLVYDLTAMDVVPPRTNLRRVTMDLEDALGEVTFEDGIPDIKFSRVLGKIWSVAFKYHFRMPPYYTLVLRSLASLEGLAIAADGTFKTFQAAYPYVVRKLLSDNSVATRRLLHQAIFNKRKEFQWNKITVFLKLASARGNFRYNTGVLPERKGLDVAKLVEISDASSSLHLNRATPERALHTANLCLRLLLSKESIVIRRLVMTANAKSLARDLISKDASIYRVLLSRVLADVIFQWMVKATGFKRAGQLEPHPRVTAGKNDEDLGLSKEAPALVTFQTAVRDRRLKVIFSKFVRDIREDPILMVRVSWNMFAISVVSAAIGVHRFIVVLSEEFLSTLPPPVPPPRLVQIQSI</aaseq> |
| Gene Sequence |
<dnaseqindica>1..409#501..740#833..999#1091..1271#1359..1411#1551..1694#1846..1950#2421..2546#2635..2832#3203..3309#3468..3630#3842..3907#4001..4094#4235..4347#4622..4692#4834..5035#5160..5606#ATGGCGGCGCTCGTGCGGCCCGCCGTGCTGCCCGTCTGCGCCATGACGGGCGGCGGCGGTAACGACAAGCGGTCGCCGCCGCAGCAGCGGTCGTGGTGGGGCGGGAACAAGCAGAGATTGCCGCACCAGCCGCGGCGGCAGCCGGGCGGGAATGGTGGCCGAGGAGGAGGAGGAGGGGCGCTGGACCAGGTGCTCGGAGTGCTCCGCCGCGACGGCGAGTTCCTCCAGGCGGCAGCCGGCGCCCCCCTCCGCGACATCTTCTGGCTCCGCTTCCTCGAGAAGAAGAAGCAGCAGCGGCGGCGGAAGCAACCAAAACCTAAACCCAAACCTCCGGAGCAGCAGCAGCAGCAAGAGGAAGCGGCGGCGGCTAGCCAAGCCCCATCCTTCCCACCTCCCTCCTACCAGCCAGGTTTGTCGCCGCGCGGCAGAGAAGCATCTCGATTGGGCTCCGTTGCGCACGCATTGTTCCTGTTGCTGATGGGGATTCTCCCAATTGGTAGGATTATCATGCCTGGATCTTATGACTGCTGATTTCGAAGCCCTGAAGCTGTATATCGGCTACTCGAAGCATGCAATCGAGCAGCAATTTCTCAAAGGCAAGCGGCAACCTCAGCATCAGCAAACTCCTAAACCAAAACTCCAGCAACAGCAGCAGCAGCAGCAGAAGAAGCAGCAGCAACAAGAGCACCAGAATCAGACACTTCAACCTCCGGCCTTCCCTCCCCCATCGTACCCTCCAGGTTGCTTACACCAAGCAGTGCCCAATTAGCTGTTGCTTAATCATTTAAGTTTCATCGATTGCATTATTAACTTGTTTTATGATTTTTGCTAGGGCTGTCTTGTATGGAGCTGATGATGGCTGATATCGAAGCTCTCAAGTTGTACATCAACTACTATGTAGCCATTCTCACCACTCCTCTACCCCAGCATTACGATCCGGAGATACTGTCCCGTTACTTCACCTCGCGTCCTCATATTCTCGCATTTCGCACCATTCAGGTAAAAGCTGTAATTACTGTTCATCTTTGCTCTTACTAAGCTTCAACTGATAAATCTAATAGTTCAGTGTGCCATGCTTCTGTATCTGTAGATAATCTTCGCATTTGTCTCGGCTGCAGTAAAGATGCAAATTTCTAAAAGAACAAACTTGATCACAGATGCCACCTACAGCGGTAATAGCACCGGAAGCAAAGGTTTCAATGCTTCACAATACATGGTTGGCCAGCTTCTCAAAGAGACATTTCTAGATCTTGGGCCTACTTTTGTTAAAGGTCAGGTTTTCAGGTTCGATAGCTTTAAGCCATGGTAGTGGCCACTCGGTTCGGATTAATGTTGACTTGCTTGTCTTCTGTGTGCAGTTGGACAGTCCCTCTCAACAAGGCCTGATATCACAGGCTCGGAGATTTCTGAGGTTAGGTAAAATTACTGCAGGATACAATAACATTTCTGCATTTCTTTAATTGCTTCATCATCTTCAGAAGTGTTTTGTTGATCATTAAACAATCTCCATAGTCTTTCTCAAAATTAACTGGCGCACACCCCAATCATAGGCACTCGCCGAGTTACATGAAAAGGTTCCTCCCTTCCCGAGAAAAGATGCAATGAAGATTATTGAGGGAGAATTTGAGCTCCCTGTATCACACATTTTCAGTTACATTTCTGATGAGCCTGTTGCTGCAGCTTCCTTTGGACAGGTAATCATATCTTGCAAAACTTTTCCCGTTCTTTTTTAAATATTAGAGACAGGAGCTTTGTAGTTTCTGATTAAGCCTTATTATGTTTTTCTGTACTATCTCTTTCAATTTTTCTGTTATGCTCAGTGTACTCTTGTTTGTTGTACTTTAGGTTTATCAGGGACGTACAGTTGATGGTGCTCTTGTGGCCATAAAGGTTCAACGGCCTAACCTTCTTCCTTCAGTATTGAGGGACATTTATATTCTACGGCTTGGGGTACGTATGCAACTTTATCTCCATTAAATATATAAGCTCATCTGTTTTTGAGTGTTTTTAATTCTGCCAAGTGCTAATGCCCACATCTTGTTCATAGAAGATATATACACCATAGGTTCTTCGCCTACTGTTTGACAAAAAAGAAAGTTCATCTTCTGATCCTCAGCATGAGCATAATACCTGATGCCTTCTATTTTGTTGTCCCTAAACAAGCTTTACCGTTTCCCTGATTTTGTGTTTAATTAAGAGTGTTAATGTGACTATGATAACCTGTGCTGACACAAGAAACATTGTACAGTACTTTCTTTCAATACAGATGGACCTTGTCTCATTTAAGTTTATCTGTATTTAGATTAAATGTTCTTGCACTTCATTTTATTTCTTTATTTTGCTTACAAAATTATAGCATTGCAGCATTTTTCCACTATAGTCCTAGCAACTTGATGTCTTTTCTACCATATATGTTTCAGCTTTCTTTTGTGAGGAAGGTAGCAAAGAGGAAAAGCAACATTGCCCTCTATGCTGATGAGTTGGGTAAAGGTTTTGTTGGCGAGTTGGACTACAATATTGAAGCTGCTAATGCTACCAAATTCCTGGTGCTTTGGTCTTGTCTCCTACCTATACTTTACTAACATATGCCTATTCCTGTTTTGGTGTTTTATCTCATAATTTGTACTTCTGTAGGAATATCATTCCAGATATTCATTTATGCTGGTTCCAAAGGTTCTCAAGCAACTTACGAGGAGAAGAGTTTTGACAATGGAGTGGGTATCTGGTGAAAATCCCACAGATTTGCTTTCCTTATCTAAAGGAATTTCATCAGAAATTGCTGAATCGTCAGAGAAGCAGAAGATCGAAGCAACAGCCCGTCTTCTTGACCTGGTATTTATGTTCGTCACAAGTTATTTCTAAATTATCTGCTTCATTTGAAAAAAGATGAGCACCATAAATAAATTAATCCACAACAATCAGTGCTCCAGGGTAGCAAATATTTGGAATTGAAGTTGTGCTCAGTGAATAGGGCTTTTTTGTCAGTTAGAAACTGCAGTTTACATGGTTCTTTGCAATATTGTGTTTGTTTCAGAAACACGCAGCTTAATTTTATAAATATCTATCACTTCAATATTGATGTTCTTTTCTCTCTGCTGTGGTAGAAATATAAACATTATAACAACAATTACTACATTTCAATAAACATTTTTCCCCTCTGGACAAAATGTTTTAACATCTTGTTAATTACTATGATGATAAGGTCAACAAAGGTGTCGAAGCATCATTAGTGCAGCTCCTCGAGACTGGTTTGTTGCATGCTGATCCTCATCCTGGGAATTTGCGTTATACACCTGAAGGTCGTGTCGGGTTAGTGTTAATTTATCTTTTTATGTACGCTCTATAAGAAAATGTCTTCTTACTATAATCAGCAGAATCATGTTATACAGTGGGTCTGATGTTTTTGTAATGGTTTTCCTCTGTCACTCTCCCTTTGAGCAATAGTAACACCTTCCTAATTATGTTAGGTTTCTTGATTTTGGTTTGCTTTGTATGATGGAGAAGAAACATCAGCATGCTATGCTTGCAAGTATCGTTCACATAGTAAATGGAGATTGGGCTTCTCTTGTTTATGATTTGACTGCAATGGATGTTGTTCCACCAAGAACTAATCTACGCCGAGTGACAATGGTAATTCATCAGAATGCAGAATATTTATTTATTTATGGTTATTACAAGATGGAAAAAAACAAAGGTTCTTATCTCATACTCCCTCCGTCCCAAAATATAAGGGATTTTGGATGGATTGGACACATCCTAGTTTTACAAATCTGGAAAGGGAGCTTGTAGTGTTATTTAGTTTGTTATTCCATTATTATTTTTAATGTTTGTTGATTGGTAGGACTTGGAGGATGCGTTGGGTGAGGTGACCTTTGAAGATGGAATTCCAGATATCAAGTTTAGCAGGGTGTGTAGCTTTCCCTCTTTAAGTTCAGTTATAAACTGCGGCATGTCTCTCTCTTTATCGGCATCTTCCTGAACTGTTAAAAACATCCTTTAGGTGCTTGGAAAAATATGGTCTGTGGCATTTAAATACCACTTCCGTATGCCGCCGTACTACACGCTCGTCCTGAGGTCACTTGCCTCTTTGGAAGGTTAGTTTGTTTAGATGAAATTCAGTACTGAACTAGCTCAATTATAAGTATGTGTTGCTTTTTTGTTTCTGACTTGTACATATTTGAGCATGTGTTTTTTTTTGGAGGCTTACCAGCGTCCCCTTTTGTGTAATCTGTAGGGCTGGCCATTGCAGCAGATGGAACTTTTAAAACATTTCAAGCAGCATATCCATATGTTGTGCGGAAGCTTCTATCGGATAATTCAGTTGCAACAAGGAGACTCTTGCATCAGGTATTATTATTTTACCTCATTTGTTTACCTGTATAGTATATATGTTAAGTTGATTTAATTAATTGATTCACTTTTCTTATATTTTGTGCAACCTGGACAATATGTGCTCTTTGAAACAGTCAACTCACCCATTTTCGTTTGTACGAGATGTACAGAAATCCTGCAATAAAATTTGAAATTCTGAGTTTTGTTAGTTCACGATATCAAACGTCAAACACCCAAGGGAAATGGCATCGATGATAATAGAGTTCTGACACCAATTATTAATACACAGGCTATTTTCAACAAAAGGAAAGAGTTTCAGTGGAACAAGATTACAGTATTTCTAAAATTAGCATCAGCAAGGTCAGTTCTCTAGTTCTGAGCAGAATTGTGTGTAAACATCATGTTTTTTTCACTAAACTGTATGAACAGAATTTCTTCTACTATGATGCTTACTTGCTTAGTTTTCACGAGATGCATCTGATGATGTTTTCGTATGTGAAGGGGTAACTTCAGGTATAATACTGGCGTTTTGCCTGAGAGGAAGGGTTTGGATGTTGCAAAACTTGTAGAGATCAGTGATGCATCTTCTTCACTCCATCTTAACCGTGCTACACCAGAAAGAGCACTACATACTGCAAATCTGTGCTTGCGGCTTTTACTATCGAAGGAGAGCATTGTGATAAGGAGACTTGTAATGACAGCGGTATGTACTTTTCCTTGTTTCCCCTCTTTACCTGAATCAACTGGCCCTTTTGGCTGGATTTCTGAACGCATAAAACACACTAAACTAGAAATCAACTGAGCTCACCATACTTCCTGTTGCACAGAACGCGAAGTCACTTGCTCGTGACCTGATCTCCAAAGATGCATCGATTTACCGGGTGCTCTTAAGTCGGGTACTTGCCGATGTCATCTTCCAGTGGATGGTGAAGGCAACTGGTTTTAAACGAGCCGGACAGCTCGAGCCTCACCCACGCGTGACAGCAGGAAAGAACGATGAAGACCTGGGGCTGTCCAAAGAAGCACCAGCCTTGGTGACATTCCAGACAGCAGTAAGAGATCGCAGGCTGAAGGTGATATTCTCCAAGTTCGTCAGGGACATAAGAGAGGACCCCATCCTGATGGTCAGAGTGAGCTGGAACATGTTTGCTATCTCGGTGGTCTCCGCTGCAATTGGCGTTCACCGTTTCATCGTCGTCTTGTCGGAGGAATTTCTGTCTACATTACCACCGCCTGTGCCTCCGCCGCGGCTAGTTCAGATTCAGAGCATATGA</dnaseqindica> 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| External Link(s) |
