BGIOSGA005408

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Revision as of 02:22, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005408| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005408, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA005408

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005408, complete gene.

LocusTag

OSJNBA0049O12.18

Ensembl Transcript ID

BGIOSGA005408-TA

Ensembl Protein ID

BGIOSGA005408-PA

Length

2307

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36402452..36404758

Sequence Coding Region

36404666..36404758,36404485..36404583,36404326..36404391,36404116..36404181,36403422..36403724
,36403235..36403304,36402989..36403130,36402452..36402575

Genome Context

<gbrowseImage1> name=IndicaChromosome02:36402452..36404758 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:36402452..36404758 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATGGATGGGCGAGGAAGCCAGGAGGAGGAGCACCTGGATTTGATCATGCGACACCACGCCAGCATGGGGCTGGATCGCTGCGAGAGCGAGGAGGCGCTGGGGTCGTCGGAGTCGGAGCAGCCCACCAGGCCGGCGCGGCCGCGCGGCAAGAGGAGCCGCGCCGCCGAGGTGCACAACCTCTCCGAGAAGAGGAGGAGGAGCAGAATCAATGAGAAGATGAAGGCCCTACAGAGCCTCATTCCCAACTCCAGCAAGACGGACAAAGCCTCCATGCTTGACGATGCCATCGAGTACCTGAAGCAGCTTCAGCTCCAGGTCCAGATGTTGTCCATGAGGAATGGTCTATATGTGCCCCCAGTGAACTTATCTGGGGCACCTGAGCATCTGCCGATCCCGCAAATGAGTGCTGCACTTGACCAGAATAGTGCCAAAGCATCAGATCCTTCAGTTGTTTTGCAGCCGGTGAACCAGACTTCAGGAGCACTTCTTCCATTTGAGCTGGCAAGCCAACATAAACCTCTATTCTTACCAGGTGTTCCTAATGCAACCGCTCTGGAGCCTCGGTTCCTTGTAGAGTCTTCGCGTTCCAATCTTCAATCCTTACGGTTCACTGAACCCGCTGAGATGATCTATCCTGATGAGATGATGTTAAAGCACCGCCTGACTTCAGCTAGTGAGAGCACAATTGTGCCAGGAACCGATGAGAAGTCGGTTAGGCAGAACACATACATGATGAATGCTGATCGTTTTGATAGATATGCACTCAGCAAAGACCAGTTGCAGCACATTATGCCGAAAAACACAGAAAGTGTACTTGATATGCCACACTTGCAAAGAATTCTGACAAAGGTGTTAATTGTTTCAGATTATAAGCTGACGATTCAGCTTCCAATCTTGGACAGGTTGCAAACCAGTGACACCAAAGTTAGGGTCGAGGGCAGAATCAAAGTAAACCCATGA</cdnaseq>

Protein Sequence

<aaseq>MMDGRGSQEEEHLDLIMRHHASMGLDRCESEEALGSSESEQPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQMLSMRNGLYVPPVNLSGAPEHLPIPQMSAALDQNSAKASDPSVVLQPVNQTSGALLPFELASQHKPLFLPGVPNATALEPRFLVESSRSNLQSLRFTEPAEMIYPDEMMLKHRLTSASESTIVPGTDEKSVRQNTYMMNADRFDRYALSKDQLQHIMPKNTESVLDMPHLQRILTKVLIVSDYKLTIQLPILDRLQTSDTKVRVEGRIKVNP</aaseq>

Gene Sequence

<dnaseqindica>1..93#176..274#368..433#578..643#1035..1337#1455..1524#1629..1770#2184..2307#ATGATGGATGGGCGAGGAAGCCAGGAGGAGGAGCACCTGGATTTGATCATGCGACACCACGCCAGCATGGGGCTGGATCGCTGCGAGAGCGAGGTTGGCGTGCGGTGTCCGCGTTTGATTCGATCGGATGCTGGTGGTGATTTGGCGGTTTGATTTGGTGTTTGGTTCTTTTTAGGAGGCGCTGGGGTCGTCGGAGTCGGAGCAGCCCACCAGGCCGGCGCGGCCGCGCGGCAAGAGGAGCCGCGCCGCCGAGGTGCACAACCTCTCCGAGAAGGTTAGCCCGGCGACGGCGACTGCTACCTCTCGTGTTCCTCTTGGTATCAGCTGATTTTGTGGGATTGATTTTGACCACGGTAATTTGGTGCAGAGGAGGAGGAGCAGAATCAATGAGAAGATGAAGGCCCTACAGAGCCTCATTCCCAACTCCAGCAAGGTAGTAAAAAAAATTGTCTCTCTTGTTTCTTACTCGATTTTTTGTTCAACGATTTATACACACTATTACTTGTGTTGCTGGAAGCTAATCTCTCGAGTTAATTTGGCGTTTATCTTGTGCTGATGGTTTCATTCACCGATGCAGACGGACAAAGCCTCCATGCTTGACGATGCCATCGAGTACCTGAAGCAGCTTCAGCTCCAGGTCCAGGTAAGTGAAATGAATGTTGCATTGTTACTGAATTGCTTGAGGATTATTTTCGCAAATCCACAGACTTAATGCTCCAGGTATCGACAATGGATATGTCAAGCGTTTTGAATATTGAGCAGCTGTGTGCTGAAGCGAAATGGTACTAGCATATATGAGTTAGGACAAGCTTGAAGTTCTAGCATCAAAAAGTGTACATTAGCTATCCTAATCACCATTTTCTGATGGCTTACTGTCTAAGCAAGATTTAGTCGGTTAGGACGTCAGAAAAGAACATTGATCTAATCACAGCATGCCACATTGTTGTTTGCACGGCATTTGTAAGAAAAACAAAATGTATGTATTCCACGTTACTGCAGCTAATTTCTGTTTGATTGCTGAATTTTTGTTCCAGATGTTGTCCATGAGGAATGGTCTATATGTGCCCCCAGTGAACTTATCTGGGGCACCTGAGCATCTGCCGATCCCGCAAATGAGTGCTGCACTTGACCAGAATAGTGCCAAAGCATCAGATCCTTCAGTTGTTTTGCAGCCGGTGAACCAGACTTCAGGAGCACTTCTTCCATTTGAGCTGGCAAGCCAACATAAACCTCTATTCTTACCAGGTGTTCCTAATGCAACCGCTCTGGAGCCTCGGTTCCTTGTAGAGTCTTCGCGTTCCAATCTTCAATCCTTACGGTTCACTGAACCCGCTGAGGTAATCCTTTTTGTCTTGTAAGATCTTCAGCAGTCAGCATACTGAACCTCTTTCCTTGCTAATAGAATAGCACTTCATATGGTCATTTTTCACTTGTTGTATCTATTTATGTTGAAGATGATCTATCCTGATGAGATGATGTTAAAGCACCGCCTGACTTCAGCTAGTGAGAGCACAATTGTGCCAGGTTAGAGAACATAAACTATTTCCAATAACCAATAGTAGTTTCAGATTGCATTTTTGGTGAACATTTTTTTACATTGACTGACCTTCCCTTTGCTTCTTCAATAGGAACCGATGAGAAGTCGGTTAGGCAGAACACATACATGATGAATGCTGATCGTTTTGATAGATATGCACTCAGCAAAGACCAGTTGCAGCACATTATGCCGAAAAACACAGAAAGTGTACTTGATATGCCACACTTGCAAAGGTAAAAGCTTCTTTTGCCACTTATTTATAGTATAATGAAAGTAGGCTCCATTTTCCTTATAGATAGGATTATTTCTTTATAGTACACCATAATACTTTCCTGTGATCATAAGCATATTTTAAGGAAACTGGATTTGGATGGCCTAAAGATTAGCGTGCGCCTATTTTATCTTGTTTTTTCATTAACATGTTTAGTAATAAATGAATGTCCCATAGCAGCAAGGTTTCTTGGTCTGACTATCTTATTCTGAGAAATAGAGAAAGGACCCTAAAATTCAAGCTGTAGGTAGATTAAACAGCAAGAACTAACATAATTTTTGCAAATTAGACTATGCAACTGCAATTATTAGACTATGCAAAGAGCAAATTTCACTTATTAAAACTAGTAAATCAGTTTGTGACACTGTTCTCCAGAATTCTGACAAAGGTGTTAATTGTTTCAGATTATAAGCTGACGATTCAGCTTCCAATCTTGGACAGGTTGCAAACCAGTGACACCAAAGTTAGGGTCGAGGGCAGAATCAAAGTAAACCCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005408