BGIOSGA005412

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Revision as of 02:22, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005412| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005412, complete gene.| tag = OsI_093...")
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Gene Name

BGIOSGA005412

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005412, complete gene.

LocusTag

OsI_09337

Ensembl Transcript ID

BGIOSGA005412-TA

Ensembl Protein ID

BGIOSGA005412-PA

Length

6503

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36360027..36366529

Sequence Coding Region

36366239..36366529,36365727..36365891,36365140..36365208,36364846..36364938,36364238..36364359
,36363345..36363540,36362527..36362702,36362072..36362201,36361267..36361310
,36360967..36361046,36360705..36360804,36360027..36360072

Genome Context

<gbrowseImage1> name=IndicaChromosome02:36360027..36366529 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:36360027..36366529 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTCGCGACCTCCACGCTCCCATTCGCGCCATCCAACCCCTCGCCGTCCTCCCGCTCCGCCGCAGCGGCTTTCTCTCCCCGCGGCGGGGTCCACTTCGCCGCCGCTAGGAGCGGCCTCCCGCTCGCGTGCGCCGCGCCGAGGCACCGAGGGAGGCCTCCTCCGAGGAGGCGCCGCGGAGGGTGCCTGGTGGTGTGGGCGTCCGCCGACTACTACGCCACGCTCGGCGTGCCGCGCTCCGCGAGCAACAAGGACATCAAAGCCGCCTACCGGAAGCTTGCGCGCCAGTGTTCCGGTTTTCCTTTTAGGGTTAGGACACCTTTGTCACTGGTTCTAGCAGTATTGACGCTGACACCTTCAACTCTGAAAATCCCAATGCCATCCTCAGTGGATGAATGGCGTGAGCGTGCCATGCTGGAGCAACCAACATTGGTGCCAGTTGCTGCAACACTGTACCATCCTGATGTCAATAAGGAACCTGGAGCAACCGATAAGTTCAAAGAGATAAGTGCAGCATATGAGGTGCTATCAGATGAAAAGAAGAGGGCGCTGTATGATCAATATGGTGAAGCTGGGGTTAGGAGTGCGGTTGGAGGCTCAGCTGGAGCTTACACAAGTAATCCTTTTGATCTATTTGAGACATTCTTTGGAGCAAGCATGGGTGGCTTTTCTGGTATGGACCAGGGAACATTTAGGACACGCAGGAGGAGCACTGCTGTTCAGGGGGAAGACATCAGATATGATGTGAATCTGGGGTTCTCAGAGGCAATATTTGGAACAGAAAAGGATATTATATTATCTCATTTGGAGACATGCGATGCATGTGCTGGTTCTGGATCAAAGATTGGGTCGAAAATGAGAATATGCTCCACATGTGGTGGTCGAGGGCAAGTAATGAGAACTGAGCAGACACCATTTGGTCTGTTCTCCCAGGTTTCAATTTGCCCCACCTGTGCAGGAGAGGGTGAAGTCATTTCAGAGTATTGCAAGAAATGTGCTGGAGAGGGGCGTGTTCGTGTTAGAAAGGAGATCAAAGTAAAAATTCCTCCAGGTGTTAGCAAAGGTAGTACTCTTCGTGTACGTGGTGAAGGTGATGCGGGACCAAAAGGAGGACCTCCTGGAGATCTTTTTGTTTGCCTTGATATAGAGGAGCCAGCAGATATTAAAAGGGATGGTATCAACTTGTATTCAACTGTTTCAGTAAGCTACATTGAAGCTATTCTGGGCACTGTTAAAAAGGTCAGAACTGTTGATGGAAATAGTGAACTTAGAATACCTCCCAGCGGACGAGAAAAGGAGCTACTTGAGGAACTGGCTTCTTTGAGCAATGGTGGTTTTGCTCGTGCACCTGTGAAGCCAAAATCCATACGCCAAGAGAATGAAACTACTGTTGCCCAAGAAAATTCGGATCAACCTGATGAAGGGGAGGGTGACTGGTTGAAGAAACTTCAAGATTTTGCAGGATCCATTGCTAATGGTGCTGCCAAGTGGCTAAAAGACAACCTTTAG</cdnaseq>

Protein Sequence

<aaseq>MALATSTLPFAPSNPSPSSRSAAAAFSPRGGVHFAAARSGLPLACAAPRHRGRPPPRRRRGGCLVVWASADYYATLGVPRSASNKDIKAAYRKLARQCSGFPFRVRTPLSLVLAVLTLTPSTLKIPMPSSVDEWRERAMLEQPTLVPVAATLYHPDVNKEPGATDKFKEISAAYEVLSDEKKRALYDQYGEAGVRSAVGGSAGAYTSNPFDLFETFFGASMGGFSGMDQGTFRTRRRSTAVQGEDIRYDVNLGFSEAIFGTEKDIILSHLETCDACAGSGSKIGSKMRICSTCGGRGQVMRTEQTPFGLFSQVSICPTCAGEGEVISEYCKKCAGEGRVRVRKEIKVKIPPGVSKGSTLRVRGEGDAGPKGGPPGDLFVCLDIEEPADIKRDGINLYSTVSVSYIEAILGTVKKVRTVDGNSELRIPPSGREKELLEELASLSNGGFARAPVKPKSIRQENETTVAQENSDQPDEGEGDWLKKLQDFAGSIANGAAKWLKDNL</aaseq>

Gene Sequence

<dnaseqindica>1..291#639..803#1322..1390#1592..1684#2171..2292#2990..3185#3828..4003#4329..4458#5220..5263#5484..5563#5726..5825#6458..6503#ATGGCGCTCGCGACCTCCACGCTCCCATTCGCGCCATCCAACCCCTCGCCGTCCTCCCGCTCCGCCGCAGCGGCTTTCTCTCCCCGCGGCGGGGTCCACTTCGCCGCCGCTAGGAGCGGCCTCCCGCTCGCGTGCGCCGCGCCGAGGCACCGAGGGAGGCCTCCTCCGAGGAGGCGCCGCGGAGGGTGCCTGGTGGTGTGGGCGTCCGCCGACTACTACGCCACGCTCGGCGTGCCGCGCTCCGCGAGCAACAAGGACATCAAAGCCGCCTACCGGAAGCTTGCGCGCCAGGTGCTCGACGCTTGTCCCCTCCCGCACCAAGCTTCAATTTTACTCGTCTTTATAGGAGTACTGTAGTTTTTGGATTGCTTTCTTTATGGACGATGTCGTACGGTTGAGAGTACACAATCACCAATACTGGAATTCGTTGGATACTTGGATCACACAACTGAAATTATTCTGTTTCTGATAGTGTATGCGATAGTTGCCGTATTACGGTATTAGATCAGCTCTGTGCACATCTGAGAAGGCCTCATTTTGTTCGCTATTGACTTCTTTTGTTTGGATAAAGTATGACATTTAGCCATGACTTTTAGAAGAACTTTCTGTGATATTATCAAATGATGCCCTCATCACAGTGTTCCGGTTTTCCTTTTAGGGTTAGGACACCTTTGTCACTGGTTCTAGCAGTATTGACGCTGACACCTTCAACTCTGAAAATCCCAATGCCATCCTCAGTGGATGAATGGCGTGAGCGTGCCATGCTGGAGCAACCAACATTGGTGCCAGTTGCTGCAACACTGGTCAGCAGGATTCTGGAATCTGGACCATGTACTATGTTGCTCTGCCATCTAGGACAAAGCCTAGACATCTGATCCGAAATTCGTGCATTCAATCATGTGCTTTTGCTAGTTTGTAACCATCGGAGCGTATAGCTGGGTTTGGAGCAAAAAAGGCAAGCTGGAATAATATAATTGCAAACAAAGTAAGACCTCTGAAGGTTCCCTTTGTTTCTGTCACCTGCTTTGGGCTGAACTAGGGAACTGTCATAACCTTAGAAGCCTACATACAAAAAGCAGGCTTTTGAACCTACGAGAGGGTCTTATTTGGAGCTTAGCTAATGCTTCAAATACCCTTCAGACCAAGTCCTCGAGGTTTTACTGAGCTGATTTTCATGGCTACTAATTTACTATGGGATTTATATACTTTACCAAGTGGCATGTTTTTACTCTTAACATCAAGCTGCTAAGATTCACACAACATGCACACTTCTATTTTAATAGATAAGAGTTATTGATAACATCTTCGCTTTTGTTTTTAGTACCATCCTGATGTCAATAAGGAACCTGGAGCAACCGATAAGTTCAAAGAGATAAGTGCAGCATATGAGGTATCCAATTCAGCATAATTTGTTAATTCATGTATTTGTCTGCTTTTTTACTTGTATTTAATATTGCTGATAAGTTATAGACTTTTACTATTGACATGTGGATTTTTTTTTGCTGTAATTGTTTACAACGTCACTGCTTCTGGTTTCTCTGTTTTGTGTTTCATTTCCCTCTTTATAAGTGCTTAATTTCATTGTCATCAGGTGCTATCAGATGAAAAGAAGAGGGCGCTGTATGATCAATATGGTGAAGCTGGGGTTAGGAGTGCGGTTGGAGGCTCAGCTGGAGCTTACACAGTATGACAGCTTTGCTTTTCAACTTAATTTTTTCTATCAGCACTTACTCCCTCCATCCCAAAATATAAGGGATAATGCCCTTTTCATTTGTCCCAAAATATAAAAGATATTAAATGTAGCACAATAGCTTTTGTACTAGTTATTCTCCACCTAGCACCTTTTGTACTAGTTTATTCCCCACCTGTCAACTTTTGTACTAGTTTATTCCTTAACTACTAACTTTCGTATCACTTTTTTATGGATTTGACGGATGTATTTGCCCTTTTGCTACTTCCTTATTTTTTGTGAAAAAAATGGCATAATCCCTTATATTGTGGGATAGAGGCCGTACAAGGCAATATATTGAGTGTGATTATATAATTATATGTGTACTAGCTAAAATTCTTTGGCTAATAAGGATACTAGATTTTGCTTATTGACTAGTATTGTTTACCCTTTTCGCTCACAGATGGCTTCAGTTCTTTACCTGTTATTTTCTATATGCAGAGTAATCCTTTTGATCTATTTGAGACATTCTTTGGAGCAAGCATGGGTGGCTTTTCTGGTATGGACCAGGGAACATTTAGGACACGCAGGAGGAGCACTGCTGTTCAGGGGGAAGACATCAGGTTCTGTTGCCAGATATTCATGGTCAATGTGTTTATCTAGTTGAAATGATCAGCTAAAGCTGTTTAAATAGCATATGAATAGCAGCACTAATTATTGTAGTTGTTACAAACTTTAAAACCAATTTGGTATGTATGCCTCGGAGATCTAGCATTATTTGCATACATCTCAATCTAGATAAGGTATTCATACAACTTTAATGCTATTTTCTACCTTTCCCATCGTTTATCTTCCCTCTGTTGCCAGTATTTACGAGTGAGCACCCACACTAGCTATTCCCTTCTTAACACCCACATTAGCTATTCCCACATTGTTCCAAAGACATGGCACTAGGATATCATGGTTGTTTGCCACTACCATTATCTTGGTCTTATAACTCCCCTTATGCCCATGCTTGGTCAAAATACAGCTTACAGAAATAGCATGTTTGGGCAACAATGTTGATTCATTCTCTGTGCCAAATGTTTCTTTTTTGGTTCCTGTTTGTGTTTTGCCTTTTCGCAAAAGCTACTAATACCTAAGTTCAAACATTTCTGATATTGGTATTTTTTTTTCTTGTGATCTTTTTTTTTTCTGCAAACAAACCAGGGATAGCAGACCAGCAGATTCTTATACAAAATTGTTCTTGCTAAAATTCTCTTATCATTTTGTGATAAAAACTAGTGTACTTTATAGACTGACATGAACTTATACCATCAGATATGATGTGAATCTGGGGTTCTCAGAGGCAATATTTGGAACAGAAAAGGATATTATATTATCTCATTTGGAGACATGCGATGCATGTGCTGGTTCTGGATCAAAGATTGGGTCGAAAATGAGAATATGCTCCACATGTGGTGGTCGAGGGCAAGTAATGAGAACTGAGCAGACACCATTTGGTCTGTTCTCCCAGGTAATAGCATTCATAATATTATTCCAGTGCTTTACCATGAAAACATCTGGCGATAATGTGACAGCTTTTGTCAGGTGCCATATGTGAAAATGAACATTAAACAGAACAGTAGAAGATCAGAATCAATACTATAAACAAGATCTCATGGAACTACAAAATATATTTTCAAGATATACTAGGATGTGAACAGTTTTTTGTTAGACAAATATAATGGTGTAAAATATACATAAGTGGCAAACATATAGATCAATGAGAAGGGAAAAGGGGTTAAATCTATTCCTAGCTTCATCATTGCTTAGTAAGAATATTAGCTGTATTAACTTGGTTGTTTTCTCACTACTGATTCTTTATTATTATTAATTTATAATGGATAAATTAAAACAGATCAAAACAACTGAAGAAGAAAATATTTACTAATTTTTCTATCATTGAAAAGATATAGGTAACCGAAATACGTATTCAAGCACAGTAGAATATACAGGCTTTGCTTTTTACAAGATTGTTGAAGACTCGATACGTAACCGAAATATAAATATTTATAGCATTAGGGTGGCCTGTGTATCTAGTTATCTATGCAAACGTTTTAGTTCATTTGATACTTATTACATATGTGATTAACTTCTAATATTTCTTGTTTTGTAGGTTTCAATTTGCCCCACCTGTGCAGGAGAGGGTGAAGTCATTTCAGAGTATTGCAAGAAATGTGCTGGAGAGGGGCGTGTTCGTGTTAGAAAGGAGATCAAAGTAAAAATTCCTCCAGGTGTTAGCAAAGGTAGTACTCTTCGTGTACGTGGTGAAGGTGATGCGGGACCAAAAGGGTGAGTGATTCGTTTGTTATTTATCTTGTCTATACTTCATACTTGAATATGTTAAGGCACTCACCAGTGAAAATTGTGGTTTGTGGATATTGGTCCTAGAGGCAAATAAATAGATCATTGGCATCCTCATAGTATTTTCTGGTGCTTTAGCTTCTGCATGCACATGCGCTCTTGCTTTTGCCTTCATCCTCTTTATTGTCTTATTTTACTACACCACCCTCCTCTGTCTGCCTTCTATATACTTTTTATGTGTGCATGCACAAATAATCCATGTGTAAATGCTATTAAAAAAAATGCCTAAACCCTTTTTGCATTTGGAAAGCAGAGGACCTCCTGGAGATCTTTTTGTTTGCCTTGATATAGAGGAGCCAGCAGATATTAAAAGGGATGGTATCAACTTGTATTCAACTGTTTCAGTAAGCTACATTGAAGCTATTCTGGGCACTGTTAAAAAGGTAAAATTTTTCTTGTTATGATTCAAAATTGTGATATTTAGTTTGGGTTGAAGCCCATTGCCATTCTTCATTAATGAGAGTACAACTAATAGGAAATGAATGCCTGAACCATCTCACTTTTTAGTAATGGAGAATTCTAACATGCAAAAACTGAGTTTTGTGTTCTGAGTTCTGACCACATTGGTTGTGTATAGGATGTTTGGTATATATTGTTGATTGACTCTATTGGTCTGCCTGAGCGTTTTTTATATACTCTGTTTTCTTGTGATAAAAAAACACCTACCTTTATGCACAATGATTAGCAAACCAAACAGGCAGTATTTTAAGTCATATTCCTAGAGGTACACCAACTTGATCTTAATCTGCTGTTACCTTTTTTGTTAAGATAAATTTGATTACACGATAATCAGATCATTTTGTTGATTTGACCTAATCCTAAACCATAGGATGTAATGTGCCTGACTTCTAATTGAGGCCAGCATTTCATTGGGATTAAATTTATATCAGCTTATTGTTAATCATTTTAGCTCAGACTAATTAACCAATGCTGCAGCTATGTTATCCTAGGTCTGATCAAATTTGTTTATCTGAGACTGATTTGAGTTTTGAACCTTTTCTAACAACCATGGCAGTTCAGATCAAAGTTAATTATTTGTACATATTTATTTTAGATTTGAGAGAAAGCATGTCCTTGTAATGATTCTTGTGGTCTATAGTCTACTGGCATTTCTGTCTTATGCTCATATTCTTCTTCCAAGCAGGTCAGAACTGTTGATGGAAATAGTGAACTTAGAATACCTCCCAGGTACCCAACCTGGTGATGTAGTGGTTCTAGCAAAGCAAGGTGTTCCATCATTGAATAAGCCATCTGTTCGTGGTGATCATCTATTCACTATTAAGGTCACTATACCCAAACGTATAAGGTTATATGCTTCCTGACTTGAACCTACTTTCGAATACATACTGTTGGTCTAAATCTACATAATCACTGAGCCCATATCTCTGTGAATTTGTGTTCCTTCCAGCGGACGAGAAAAGGAGCTACTTGAGGAACTGGCTTCTTTGAGCAATGGTGGTTTTGCTCGTGCACCTGTGAAGCCAAAATGTAAGCAAGCTTAGCTATATCCCCCACCCTCCCCTCTTCCCTCCCTCCCTCTCCAGAAAAGAATTCATTCTCATATTCTAACGTTACTATCGAAGTTTGATGAACTTTTTATTTTTAGGAACTAGCCTTGGAAGGTACTAACGATTTGCATTTGCATTGCAGCCATACGCCAAGAGAATGAAACTACTGTTGCCCAAGAAAATTCGGATCAACCTGATGAAGGGGAGGGTGACTGGTTGAAGAAACTTCAAGATTTTGCAGGGTAAATATTAGCTGTTTCTTATTACAATGCAATTGAGTTCTGGGAGGGTTTACCTCATACATTCATGCATCATATTGCAAATTTTGGGAACTTGATCATTTGTAAAAAAAATGCAAGGAAGTATAGGTTATAGTGAGAAAGAAAGAGAGCTGTATATTACACTTAAAAAAGTTAGTGTTATAACCAACCTTTATACATTTTCATTGATCTTCTACATGTTTTTCTAAAGATAAGTTACTGAGATAGTGAATCCACATCAGCAAAATGTTTTTGTTACACTGAACATATAGTTAATACTTTTCCTCTTTTGCTGTTTGGGGCAGCTGAAGTTTTTGAAAATATGCTCTTTCAGTAATGATCCATAATGAGGTAAAACTGTTGTTACAGGACCTCCTTTACAGCAGGTTGTAGCCTGTCTAACTCTGTTGGTTGCATTCATTTTTACTTCTAATATTGATTAGTGCAACCCTTGTTCCAAAAATGAATAGAAGGAAAAATGCTAACTGACGGTCTCAATATACATACTTGCTTCTATTGAAGTTTGAAAATACAAATTGTGGATTTCTTTGTTTCTCTATCCTATGCAATTCTGCATTCTTTTGTTGATCATGTTGCTTACTGAATTCTTTCAGATCCATTGCTAATGGTGCTGCCAAGTGGCTAAAAGACAACCTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005412

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA005412&oldid=58964"