BGIOSGA005415

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Revision as of 02:22, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005415| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005415, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA005415

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005415, complete gene.

LocusTag

OSJNBA0014B15.23

Ensembl Transcript ID

BGIOSGA005415-TA

Ensembl Protein ID

BGIOSGA005415-PA

Length

3586

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36325243..36328828

Sequence Coding Region

36328727..36328828,36328496..36328612,36327822..36327929,36327315..36327506,36326950..36327141
,36326475..36326593,36326300..36326387,36325937..36326056,36325661..36325801
,36325243..36325320

Genome Context

<gbrowseImage1> name=IndicaChromosome02:36325243..36328828 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:36325243..36328828 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGTCGACGACGCCGACGACGACCAGCTCGCCTCCATGTCCACGGAGGACATCGTCAGGGCAACCCGCCTCCTCGACAACGAGACCCGCGTCCTCAAGGATGAGCTGCAGCGGACGAACCTTGAGGTGGAATCCTACAAGGAGAAGATCAAGGAGAACCAGGAGAAGATCAAACTCAACAAGCAGCTGCCTTACCTTGTCGGCAACATCGTCGAGATATTGGAAATGAACCCCGAGGATGAGGCTGAAGAGGATGGTGCGAACATCGATCTGGATTCACAAAGGAAAGGAAAATGCGTTGTTTTGAAGACATCCACAAGACAAACAATATTCCTTCCTGTAATCGGGCTTGTTGACCCTGAAAAGCTCAAGCCTGGGGATTTGGTTGGAGTCAACAAAGACAGCTACTTGATACTAGACACGCTACCTTCAGAATATGATTCACGGGTTAAGGCAATGGAGGTAGATGAAAAGCCTACAGAGGATTACAATGACATTGGTGGCCTTGAGAAACAGATTCAAGAGCTTGTTGAAGCAATAGTATTGCCCATGACTCACAAGGACCGGTTTCAGAAGTTGGGAATTCGCCCCCCGAAAGGTGTTCTTTTGTACGGACCACCTGGCACTGGAAAGACCCTAATGGCTCGTGCATGTGCTGCCCAAACTAACGCCACATTTCTGAAACTTGCTGGTCCACAGCTTGTCCAGATGTTCATCGGTGATGGTGCAAAGCTTGTCCGTGATGCCTTTCAGCTTGCAAAGGAGAAATCCCCCTGCATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAGTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAATCAGCTAGATGGATTCAGTAGTGACGAGAGGATAAAGGTGATAGCTGCAACTAATCGCGCGGACATTCTTGATCCTGCTTTGATGAGGTCTGGTAGGCTGGACCGAAAAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTGGCACGATCTACGGACGACTTCAATGGTGCACAACTGAAGGCCGTTTGTGTAGAAGCAGGCATGCTTGCCCTACGCCGAGATGCTACAGAGGTGACACACGAGGATTTCAATGAAGGGATCATACAAGTGCAAGCCAAAAAGAAGTCCAGTTTAAATTATTACGCTTAA</cdnaseq>

Protein Sequence

<aaseq>MAVDDADDDQLASMSTEDIVRATRLLDNETRVLKDELQRTNLEVESYKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPEKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQVQAKKKSSLNYYA</aaseq>

Gene Sequence

<dnaseqindica>1..102#217..333#900..1007#1323..1514#1688..1879#2236..2354#2442..2529#2773..2892#3028..3168#3509..3586#ATGGCCGTCGACGACGCCGACGACGACCAGCTCGCCTCCATGTCCACGGAGGACATCGTCAGGGCAACCCGCCTCCTCGACAACGAGACCCGCGTCCTCAAGGTTTGCTCTCTCTCTCTCTCTCCGCCTCCGCGGGAAACCCTAGCTTTTGCCCCAGCGATCTCCTCCATGGGATTTGGTCTGATTTGTGGGGGTTTGTCTCATCGGGTGCCTCAGGATGAGCTGCAGCGGACGAACCTTGAGGTGGAATCCTACAAGGAGAAGATCAAGGAGAACCAGGAGAAGATCAAACTCAACAAGCAGCTGCCTTACCTTGTCGGCAACATCGTCGAGGTTTGTGCGCGCACCACTTTGACTGGGTTACCAGTGAAATTTCATGTTCAATTTAAGGCCCAAGTAGTTTTAATGTGCGGAGATCGGTTCTGGACATCGATCTGGAAAATTGGAGCTTGACTTCGTTGTATACTTTGTTGATGCCATATTCATGATTTTGTACTAGTTTCTGTTCACTCCCCTGTAATTGCCCTTTACCCATGTTTCATATTCTAAGCGTCATGTGTGTTAGGAATAGTGATTAATGGCATAGATCTTAATTTCAGGACATAATGACCTTATTGTGCTCCTTTTCCTGAGATAACGAACATGCCAAATTGTCAATATGTTGAAAGTACCCAAGATGTAGTCCATCTTTACATTAATTATTATATTGCTGGTGTGCTCGATATCTTAACTTAGTTGGTTTGTGGATGTTGTTTCATAAACTCTTATGATTTCATTGGCAAAGGTATACCACTTTTGGGTCTTTTCGAGTCCTTGAGAATGTCAGAGCAGAATTCTTCGTAGTTCTAATTCTGCAAGATTGTGGGGGCAAATTTACAAGTTCTTACTTCCTATTTCAGATATTGGAAATGAACCCCGAGGATGAGGCTGAAGAGGATGGTGCGAACATCGATCTGGATTCACAAAGGAAAGGAAAATGCGTTGTTTTGAAGACATCCACAAGACAAGTAAGTCAACTTACTTGTCGGTCATCTGCTACCTTTCTGATGAATCATTAAACAAGCAGTTGAGTTCTTACTTGATCTATATTTTGGAGACTCGGGATAATCATAACCACTTCGGATTTCATTTGCTGTTTTCTTTGCCTCATGCTTTCCTTGGACTTGAATATTTGATACCACCAAATACATAGAGCATGATATACCAACTTATCCTAAATCTTAGTTGTGTAATACTCCTACCATGCATATACCGTTTCTCATCTCAATTAAATTTATTTGTATTGATACCTGCATGGGTTTAATTGACTACTTTAATTGCAGACAATATTCCTTCCTGTAATCGGGCTTGTTGACCCTGAAAAGCTCAAGCCTGGGGATTTGGTTGGAGTCAACAAAGACAGCTACTTGATACTAGACACGCTACCTTCAGAATATGATTCACGGGTTAAGGCAATGGAGGTAGATGAAAAGCCTACAGAGGATTACAATGACATTGGTGGCCTTGAGAAACAGGTATTTATTTACTTTAAAGATCTAATGATGAAAACATTAGTTAGGATGGTCACCATTCTGTTGTTATGTAAGTAGCAGTAACTTCATTTCCATATCTCATAAGTGTTCATCAGTTGCTGTTTGTTCATTGTTATCTGCTCTCTTATGTTCTACTTTTATATTGTCTAATGCAGATTCAAGAGCTTGTTGAAGCAATAGTATTGCCCATGACTCACAAGGACCGGTTTCAGAAGTTGGGAATTCGCCCCCCGAAAGGTGTTCTTTTGTACGGACCACCTGGCACTGGAAAGACCCTAATGGCTCGTGCATGTGCTGCCCAAACTAACGCCACATTTCTGAAACTTGCTGGTCCACAGCTTGTCCAGGTAGCTTACTTTCTGTGATAAGGCTGTTGAAAGCTATGTGATATCCCTGCTCCTGCTAATTCAAATATATGAAAGCTCAAATGATGCTAGGGTCCTTAAGCCTTCTGTTTCAATTATTGAGAACTTTTCATACTTCATGTGCTATGAGCCTAGGACTAGTACTCTCATATCACCTTATCTCTTGGCACAAGGATCAGATGGAATGTTGGAACTTTGGTTTTCCAGTTACCTCTGTAGCCTATAATCCTGCAATCTAGAAGAATATTGCTTTGGTCCAGTGTTGGTCTATTTTCTTCCTTTATTGGTTCTTCTGCTTGCTGCTAGATACATATTAATGTCTATGCGAATTGGTCCAGATGTTCATCGGTGATGGTGCAAAGCTTGTCCGTGATGCCTTTCAGCTTGCAAAGGAGAAATCCCCCTGCATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAGGTACATTTAGCATTGTCTTTATCAATGCATGCAACTAGACATATTATTGTTCACAGTACAATAAACTGTAATTTTTTCCTGCTACAGTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAATCAGCTAGATGGATTCAGTAGTGACGAGAGGATAAAGGTCAGCATTTTTATTTGTTTCTTAAGTCTGAATATTTGCAAACTGTAAACCATTCATTGTCATCGTTATGATGATTTGGCACAAAATGGTTTTGAATTCATTAATCTTAATAGAATGAGAAATACATTTAATTGCAAATGATAAGTCTTAGACATGCTTCTACTGACCATTATCTATCAATACTTTATGAATGCTTCATTAATATATTATCTAAGTAATGGTTGGATGTGCCATGGACTACAGGTGATAGCTGCAACTAATCGCGCGGACATTCTTGATCCTGCTTTGATGAGGTCTGGTAGGCTGGACCGAAAAATTGAGTTCCCTCATCCATCCGAAGAAGCACGAGCTAGAATTTTGCAAGTATGTCTCCTGAAATCTGTGTTGGCTACTTGTTCCAAAAATTGCTGACCTGATTATCTTTCTTTAAAAATAAAAATAAATCCTTGTTCTGCCAGAACTAAAACAATCTTTATTTTATGTGTTGTCTTACTCTAGATCCATTCAAGAAAAATGAATGTAAACCCTGATGTCAACTTTGAAGAGTTGGCACGATCTACGGACGACTTCAATGGTGCACAACTGAAGGCCGTTTGTGTAGAAGCAGGCATGCTTGCCCTACGCCGAGATGCTACAGAGGTTTGTGTTACATTCTGATCTTGTGAATTTGTTTGGTAACTTACTGGTATATATATTGGGGATTGGCGGGACCTGATCAATCCATTGGTAAAAGCAATGGAATATGAGTACCCCACATAAATTAGGTTTGGAGCCTGGGATAGAGTGATAAACATTAGATCTATGGCATTTCTAGACCATCACATGTCGGTTTGGTATTTGGTTGCAAAATTTTCGAGTCTATTTATTAGCTTATACCAAATTGCTGCTTTGACTTTGTCAATCCTGAAGCGCATGCAACTGTATATAGGAACAATCATAATGTATTGCTTTGGCTGATCCTTGTCCATCGTTCACGCAGGTGACACACGAGGATTTCAATGAAGGGATCATACAAGTGCAAGCCAAAAAGAAGTCCAGTTTAAATTATTACGCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005415

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA005415&oldid=58967"