Os12g0511300

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Revision as of 10:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0511300| Description = Conserved hypothetical protein| Version = NM_001073400.1 GI:115488761 GeneID:4352325| Length = 6974 bp| Definition ...")
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Gene Name

Os12g0511300

Description

Conserved hypothetical protein

Version

NM_001073400.1 GI:115488761 GeneID:4352325

Length

6974 bp

Definition

Oryza sativa Japonica Group Os12g0511300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19845807..19852780

Sequence Coding Region

19845992..19846128,19846238..19846383,19846544..19846581,19846995..19847110,19847333..19847432
,19847522..19847557,19847709..19847759,19847891..19848014,19848304..19848429
,19848557..19848714

Expression

GEO Profiles:Os12g0511300

Genome Context

<gbrowseImage1> name=NC_008405:19845807..19852780 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:19845807..19852780 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagctcgtcgccggcgatcgccgcggcgtcggcggcagtggtggcgctggccgtcgccaaccgcgtgctgtacaagctcgcgctcgtgccgctcaagcagtacccgttcttcctcgcccagctcaccaccttcgggtacgtcgccgtgtacttctcgatactctacgcgaggtaccgcgcgggggtggtgacgggggacatgctggcgctgccgaagcgccggttggccgccatcggcttgctggaggccctcgggcttgcggccggcatgtctgcaggagctatgcttcctgggcctgctattcctatactgtcccagtcattcctggtgtggcagcttatcttctctgcgctgctgttgggaagaacgtattcaatgaggcaaatcattggttgtttccttgttgcttctggtgtgattcttgctgttgcaagtggagcgaatgagggtcaatttctgtctgaagtcaagtttatttggctagcactgatggttgcatcatcagcatttcaagcaggtgcttcaattctgaaggaatctgttttcattgatggtgcaaagcgtcttaaggggaggcgcccagatatctttgtggttaattcgtttgggtcaggatttcaggctctctttgtctttcttcttctcccacttctttctaatttgaagggaataaagtttgctgagcttcctgcttatttaaatggtggtgctgagtgcttcctaaatgtcgatgatagtctgattgattgtggaggagctccatttctaccattgctgtttatattggtgaatatggccttcaatatcgcattgctcaatttggtgaagctgtcatctgcgctggttgcttcgcttactgctacttcagcagtgccaatatcaatctacatactttcacttccgttgccctacatccctcatggcgcagagttaagttcatctttcatcctaggcggtgtggtattgctgatggggctgattatatataaccttccgcaatcatcgaagaaacaatccaagattgagtga</cdnaseq>

Protein Sequence

<aaseq>MSSSPAIAAASAAVVALAVANRVLYKLALVPLKQYPFFLAQLTT FGYVAVYFSILYARYRAGVVTGDMLALPKRRLAAIGLLEALGLAAGMSAGAMLPGPAI PILSQSFLVWQLIFSALLLGRTYSMRQIIGCFLVASGVILAVASGANEGQFLSEVKFI WLALMVASSAFQAGASILKESVFIDGAKRLKGRRPDIFVVNSFGSGFQALFVFLLLPL LSNLKGIKFAELPAYLNGGAECFLNVDDSLIDCGGAPFLPLLFILVNMAFNIALLNLV KLSSALVASLTATSAVPISIYILSLPLPYIPHGAELSSSFILGGVVLLMGLIIYNLPQ SSKKQSKIE</aaseq>

Gene Sequence

<dnaseqindica>186..322#432..577#738..775#1189..1304#1527..1626#1716..1751#1903..1953#2085..2208#2498..2623#2751..2908#ggaggaggagagaacccgcactcccacggcaagaaagcaacccacgcgccgccgctcaccgccgccgccggcgccgccgtgccgtacgccgtggtattccgttcccgattccgtcttctaggcctcgtgcatgggcgtggttgtgagacccagctctgcgtcgagtaactgaccctttttttgcgatgagctcgtcgccggcgatcgccgcggcgtcggcggcagtggtggcgctggccgtcgccaaccgcgtgctgtacaagctcgcgctcgtgccgctcaagcagtacccgttcttcctcgcccagctcaccaccttcgggtaaggccgaccccgcgcttgcgcgcgcgcgaggtgttcgacggaattcgcgaacccgtgttctttttttggggttgacactgatttgtgtgctgtggttcgagcgtaggtacgtcgccgtgtacttctcgatactctacgcgaggtaccgcgcgggggtggtgacgggggacatgctggcgctgccgaagcgccggttggccgccatcggcttgctggaggccctcgggcttgcggccggcatgtctgcaggaggtaatgttcttttcaatctccaaagaagtggccactctatgaaaagttctagtagcaattacagttcaactgcagttcttgcagaccattagagtttcggtatggtattgtggttgtttgtttgtgttgattaattggttgttgtttctggaatctgcagctatgcttcctgggcctgctattcctatactgtcccaggtattttgcttttgttgatttgaattataaccagtttttcatctctgtttggttattttgtatcaagttacattagtacttggttatatatttcttttgtgatgaattcatgttttagtgtaatactatttatggattctgcaaaactatttatttgaaccaccctaaggttaggttattggttatcctgctatgttctaataatataaacttcacctatagacagtaacaatcttgtttgattattagtttaaacctaattaataataccaatttcctacaatgtcctaatagtaccaattttaactataaaaaagaacaatcttactattcgattatcacttatcagtatcgaaccttgttacctctgtccaatgctgatggagtaattttcttctgaatatgtgctgcagtcattcctggtgtggcagcttatcttctctgcgctgctgttgggaagaacgtattcaatgaggcaaatcattggttgtttccttgttgcttctggtgtgattcttgctgttgcaaggtatgccatttgagatatttcttatctggtaattttcacacaacaaatatgtttggagaaagagttgctgcacatgcacttgtgcctttcaccagagatcatcgcacaatagcgattttttgctaaaaactgttcttagtctaattctgacatcaagtggttacttcatactgttataagttattaagattggttggtcatctcaaaactctgcttttgcagtggagcgaatgagggtcaatttctgtctgaagtcaagtttatttggctagcactgatggttgcatcatcagcatttcaagcaggtgcttcaattctgaaggttcaactgcttacactctttacattatttcatactgttcattttacggctttccttgtacttgtctgaaatacaaagttctgctgcaggaatctgttttcattgatggtgcaaagcgtcttaaggttcttctcactctttactcctatttatgtgcctgatcataatttcatcattggtcaaaaactcctgaattaggtttataacctcctgacattcatctgcctgtccaaatgtttagaaatcttactgcatgacattcatctgcctgtacaggggaggcgcccagatatctttgtggttaattcgtttgggtcaggatttcaggtgatttttttaatttaacacaatgattgtctccattgcagttttcatttttttctctctcctcctctgcatgaccatatatagtctgaactcacaccctacatttttatttaatatatttttatctgcaggctctctttgtctttcttcttctcccacttctttctaatttgaagggaataaagtttgctgagcttcctgcttatttaaatggtggtgctgagtgcttcctaaatgtcgatgatagtctgattggtaatgcttcttgcctggaatttatatatctacacatccaaaagtaccccacgttagctgaagtgttggtagtacaagaagtgactttatgagtctttgggcctgtaatgtgtagctatttgaattgtgagcaacttaatgcctttcaaattgacatttttatttgaattgtgagcaacttaatgcctttcaaattgacattttcgttggtattagtggttcaggagtcctaaagtctattcattctttataatggaagcatataatgctcattttctgtaacttgtagattgtggaggagctccatttctaccattgctgtttatattggtgaatatggccttcaatatcgcattgctcaatttggtgaagctgtcatctgcgctggttgcttcgcttactgctacttcagcaggttttctttttccccaacttttgctccccctcctgcttttgcatctaattgtttcttctgatttgtgtccaacctgaagaacagtatctcaatgacggatgctgattgctgtttgtttctattgcagtgccaatatcaatctacatactttcacttccgttgccctacatccctcatggcgcagagttaagttcatctttcatcctaggcggtgtggtattgctgatggggctgattatatataaccttccgcaatcatcgaagaaacaatccaagattgagtgaagataaagtgactgaatcaaccaaacactgtccggctcatctgacacgctacgggattttactgatttatttgagttgcaacatagtgaaatagggttccaaactgaagggcatgacataacacattcaaatttgtgaatacgttgatttatttgaactcaaaattcaagcagcacgtgtacgtaggatggccgtcaggccatatatagttatattatactcctgtagcctgtgtgttctcaaaaatataaaaataattgtaatggatttggtacaaattgagactaattctacaattccagtacaaatcccttacccagtggccagttccattgatttaaaacccaaatgcaacacaacattcatgcacagaacaatcagaaactgccttaggcacagtaatcccatcagagatgtaccacctacgtaatagataagaaaacttatgtcaggactcatgagtaaagcagaattcttgtgcttaaactactcatcagcacatatatacatcatcagtgagtatgcttctggcatcacactccagattcctgtgatccagtctgcagatgaatagctgattaccatccaatctcttcatggcttcatactgaacctgctggtgtggttattagtcaccacactgcaaaactgcatgctgtatcgtctggagtttggaccctccctggaatccgggtctgcatgccaatctagctatgatcagttcgaattcaacaaatcaacaatcacaattcacacttcacacatggtctattgctgaaaaaaaaaatcaaacatggccaaaaagaaaaaactggatgctttgggatggaaccattctagtggactaggtgcaaaggagtgatgcctttgcttgtatatgtttcgtgtttgtcttttgcgtatgattatgtactatataagtaatgcattgtggttctgaaatttcagacaagataaagatgcaaaaacttcagagtgtatgatccatttggtttgtgcaaaaaaggcagcaaaagacgcatctcagacttctcagtattgctttgcagttttgcactagcctttttatgaaatattttgtcttctatattgcaagaatcaagtaagaattttccttgatctgccacgtgaccggaattgcatgccaaatttaaaagtaaaatatttagggtttgaagaaagagtaaaatatttggtatgagagcattacctatgaagttcatatcattcagtgctaccacagaacgtaaagtgagtctgtaagacctcattctggcattgcactttaccaggagcaagatttgaatcatatccaaatgctcagccatttcttagtcttagacaaatgtctccacatgctgcacaggtatttagtctatgacaataaattggctggaaggatagctgatgctgtcatcgaaatgctgaatcttatcatcatcatcatcgcttgtttctgcatataaattcgtacataaggatatgcaaagagtgtaaagtattaacagctatatgcagcagaagcatctaaaatgctccagaaaagacattttatgagctgaatgttcactgtagacatggaagatagatcattctttctagaatgccagtaaggtcaaaacaaaagttctcatgttacaggagacaaacagagtttctgaacaagcaactgtatgtctgtaaaaaaaaaaagagtaaccttattttgtaccataatcctttaacggtaataattgaggatagttggtttcatatagaaggtcaggacaataaaacaattgtacgaaattgctaagtgttacagcatcttgtcgagtagcagaggtaggaacaggacaagtgggattttaacagaggatgaattcaggatgtgtaagcgcgccctcagcattgagtgcaaatcataatgcttggaggtgagtgaataataaatatctaattgatcaaagacacaataacataaagttggttgttgcatggaaaagataaaagttcagaatagaaagaaagtgcaccttcagagtaggctttcatatccacatgatcaatgttttcaatttttccccagtctgaaccaacattcctttcatagagcttcagaaaccttgggtcacagccccagattgtgagcttattaagtgaaaatggcagcttggggagaaactgaattcgaggggctttttcgatatgcaaactctgtagtgataccaacttttccatctgagtaggtagggtctgcagattcttagcaactcctatctcgatcaaacggagtgaagaagcattctgaagcaaccactcctctggcaaggaatccattgcataatcatcaccaatatgcagctccaaggtgtacctgaggctctttattggctccaccagcaacatggcttcacgatcaactttgagcttccatagcataaaggagcagccagcctgtggagatgatgaagaatagattttgtcacagtacaggattgatagagttctcagggaggcagcagctccaagcccaccgagtgataacaagctttcacatctggctatcaacatatcattgagatttttcagtgtcctaaacacttcatctgatggaagtttttctacactactgcaactgaccaatgataaccttctgagataggtgaggtttggcagtgacatgagaactgaagcctcaatatgacagcatggattgatatccaagttattgagtgatgtagggaacagattgctgtcagtcttaacattcctcagcattgggcatgcaactatttctaggaaattcaagtgatgtaattctgtgaaaccatttgccggtagatggcatagttttgcacaatgtctcacgagtaatgtcttgaggtgctgaagatgttgctgttgatctaggagaccatccaaagaagtcaaatgtgcacaactttcaatgtgcaaaagagaaagacgcgaatctactgataatgattcacatgtgctagcatatgcctgatgtaatctagggagaactgcaagcccaacatgccttattattaatttctcaagggtacaaggtaaagcagggagtttcttcaggttagggcaccaccggacgatcagcgtattgagcaatgggggcagaaatgcattatctgattctatgctcccagattgctcctcaatcaccgagcctaattggaaaaggtgttccagctttagatacttcagtgaactaagctccttaaatgatggcagggtcctccattccatgcagtattgaagctcaagtgacaccaaatggatgagaaatgaagtctcgatccaaaccggaagttggactccattgtatccatacacatgcaactgctgaattcctttgtttggttctaggttatcgatgatttgatgatctatatcctctggatcatttgagtgtttgttccatgatagtgacaaaaacatcatgtctggtttgtcctttaatttgatctccattgcgtctttacagttcctgacattttggaggtttcttaggctgagtcgcttaaggtttgttaaagtactcaatgcactcaacatgtgaccatcatttttagctacctcgaattcttgtaactcctgaagtgttgttggcatcccagttttaagtatctttgataacatactgtcaggaacatgaagacaacgcaagaaacgcatgttccgtatgccatccaagtctgcttgtttacctgtgaaatatttgagcttgaacacttgcagatgacagagtttaaggatacttcgaatatgagacttatcacatgaaaacaggaagaggtaacggagctgtgttagactggggatttcatcaagtgcattagagagggatggcacatccaagtatagcagacgcaagcgtgccgatttacgaagaacttctccaagcataagttcagcctcttgatcaagacaaaattcactttgtataataagagtacgtaaatttgttataggggggattgctcttaaagagccacaatgtgcaatagacaagtgtactgttgtccgcctgacatcttgaaaattattgtcatctactcttgcg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0511300, RefSeq:Os12g0511300