BGIOSGA005419

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Revision as of 02:22, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005419| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005419, complete gene.| tag = OVP3| ...")
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Gene Name

BGIOSGA005419

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005419, complete gene.

LocusTag

OVP3

Ensembl Transcript ID

BGIOSGA005419-TA

Ensembl Protein ID

BGIOSGA005419-PA

Length

4032

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36249796..36253827

Sequence Coding Region

36253590..36253827,36252091..36252665,36251512..36251891,36251341..36251427,36250919..36251249
,36250225..36250635,36250096..36250155,36249796..36250002

Genome Context

<gbrowseImage1> name=IndicaChromosome02:36249796..36253827 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:36249796..36253827 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGATCCTGTCGGATGTGGCCACCGAGGTGCTGATCCCGATCGCCGCCATCATCGGGATCGGGTTCTCCATCGCGCAGTGGGTGCTGGTCGCCCGGGTCAAGCTGGCGCCGTCGCAGCCGGGAGCGTCGAGGAGCAAGGACGGGTACGGCGACTCGCTGATCGAGGAGGAGGAAGGGCTCAACGACCACAACGTCGTCGCCAAGTGCGCCGAGATACAGAACGCCATCGCTGAAGGAGCAACATCGTTCCTTTTCACCGAATACCAATACGTTGGCGTTTTCATGTCGATATTCGCGGTGGTGATCTTCCTCTTCCTCGGCTCCGTCGAGGGATTCAGCACAAAGACCCACCCCTGCACATACAGCAAGGACAAGGAGTGTAAGCCTGCTCTGTTCAATGCCCTGTTCAGCACCGTCTCCTTCCTGCTTGGAGCCATCACCTCAGTGGTTTCTGGCTTCCTCGGGATGAAGATTGCGACTTACGCAAATGCGCGGACCACCCTGGAGGCGAGGAAGGGTGTTGGCAAGGCCTTCATCACCGCGTTCCGTTCGGGAGCGGTGATGGGATTCTTGCTGGCATCAAATGGGCTTCTGGTGCTTTACATTGCCATAAACTTGTTCAAGATGTACTATGGCGATGATTGGGAGGGTCTCTTTGAGTCCATCACTGGCTATGGCCTTGGTGGATCCTCAATGGCTCTGTTTGGAAGGGTGGGTGGAGGTATCTACACCAAGGCGGCTGACGTCGGTGCTGATCTTGTTGGCAAAGTTGAAAGGAACATCCCTGAAGATGATCCTCGGAACCCTGCTGTGATTGCTGACAATGTTGGAGACAACGTTGGTGATATTGCTGGAATGGGATCAGATCTGTTCGGGTCGTACGCTGAATCTTCCTGTGCTGCCCTTGTTGTTGCTTCCATTTCTTCCTTTGGGATCAACCATGATTTCACTGGGATGTGCTACCCGCTGCTGGTCAGCTCCATGGGCATCATTGTCTGCTTGATCACCACTCTCTTTGCCACTGACTTCTTCGAGATCAAGGCCGTGAAAGAAATCGAACCGTCACTAAAGAAGCAGCTCATCATTTCTACGGCTCTGATGACTGTTGGTATTGCACTGGTCAGTTGGTTGGCGCTCCCATACAAATTCACCATCTTCAATTTTGGTGAACAGAAGGAAGTCACTAACTGGGGGTTGTTCTTGTGTGTTTCGATCGGTCTATGGGCTGGTCTGATCATCGGATACGTGACAGAGTACTACACTAGCAATGCATACAGCCCTGTTCAGGATGTCGCAGATGCTTGCAGAACTGGTGCTGCCACCAATGTCATATTTGGGCTTGCTCTAGGATACAAGTCTGTTATTATCCCAATTTTCGCTATCGCGCTTGGTATCTACGTCAGCTTCACCATTGCTGCGATGTACGGCATAGCAGTGGCTGCCCTTGGCATGCTGAGCACAATTGCCACTGGACTGTCCATTGATGCTTATGGTCCGATCAGCGACAACGCCGGTGGTATTGCTGAGATGGCAGGGATGAGCCACAGAATCCGCGAGAGAACCGACGCTCTTGACGCTGCTGGAAACACAACCGCTGCTATTGGAAAGGGTTTTGCCATTGGGTCAGCAGCACTGGTGTCCCTTGCACTGTTCGGCGCCTTCGTCAGCAGAGCCGGGGTGAAGGTGGTCGACGTCCTGTCCCCCAAGGTGATCATCGGATTGATCGTCGGAGCAATGCTCCCGTACTGGTTCTCCGCCATGACGATGAAGAGCGTCGGCAGCGCGGCGCTGAAGATGGTGGAGGAGGTCCGGCGGCAGTTCAACACCATCCCCGGGCTGATGGAGGGCACAGGCAAGCCGGACTACGCCAACTGCGTCAAGATCTCCACCGACGCCTCCATCAAGCAGATGATCCCTCCCGGCGCCCTCGTCATGCTCACGCCGCTCATCGTCGGCACCCTCTTCGGCGTCCAGACCCTCTCCGGCGTCCTCGCCGGCGCCCTCGTCTCCGGCGTACAGGTCGCCATCTCTGCGTCGAACACCGGTGGCGCATGGGACAACGCAAAGAAATACATCGAGGCTGGGGCGAGTGAGCACGCGAGGTCGCTGGGGCCCAAGGGATCGGACTGCCACAAGGCGGCGGTGATCGGCGACACCATCGGCGACCCGCTCAAGGACACGTCGGGCCCGTCGCTGAACATCCTCATCAAGCTCATGGCCGTCGAGTCGCTGGTGTTCGCGCCATTCTTCGCCACGCACGGAGGAATTCTATTCAAGCTCTTCTAG</cdnaseq>

Protein Sequence

<aaseq>MAILSDVATEVLIPIAAIIGIGFSIAQWVLVARVKLAPSQPGASRSKDGYGDSLIEEEEGLNDHNVVAKCAEIQNAIAEGATSFLFTEYQYVGVFMSIFAVVIFLFLGSVEGFSTKTHPCTYSKDKECKPALFNALFSTVSFLLGAITSVVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLASNGLLVLYIAINLFKMYYGDDWEGLFESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHDFTGMCYPLLVSSMGIIVCLITTLFATDFFEIKAVKEIEPSLKKQLIISTALMTVGIALVSWLALPYKFTIFNFGEQKEVTNWGLFLCVSIGLWAGLIIGYVTEYYTSNAYSPVQDVADACRTGAATNVIFGLALGYKSVIIPIFAIALGIYVSFTIAAMYGIAVAALGMLSTIATGLSIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGVKVVDVLSPKVIIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTGKPDYANCVKISTDASIKQMIPPGALVMLTPLIVGTLFGVQTLSGVLAGALVSGVQVAISASNTGGAWDNAKKYIEAGASEHARSLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGILFKLF</aaseq>

Gene Sequence

<dnaseqindica>1..238#1163..1737#1937..2316#2401..2487#2579..2909#3193..3603#3673..3732#3826..4032#ATGGCGATCCTGTCGGATGTGGCCACCGAGGTGCTGATCCCGATCGCCGCCATCATCGGGATCGGGTTCTCCATCGCGCAGTGGGTGCTGGTCGCCCGGGTCAAGCTGGCGCCGTCGCAGCCGGGAGCGTCGAGGAGCAAGGACGGGTACGGCGACTCGCTGATCGAGGAGGAGGAAGGGCTCAACGACCACAACGTCGTCGCCAAGTGCGCCGAGATACAGAACGCCATCGCTGAAGGTGAGCACTGAGCAGAGCAGCCTCGCTACTACTGTACTACACTTACTTAGTTCTTTCGCTTCGTCGGTTGCTTGCTTCCACGTGGCATATACATGGCGTTTGCTTTTTGCAATTTTTTTTCCATTTTTTTGTTCGGAAAAAAAGTATATATATTTTTTTGTGGGAGTAGTTCTTAACTTGCACAATTGAAGAAAAAAAAAGTTGATTCTTGTTATTAGATAATGAAAATGGTTTACATTTCCTGCCTCTGCGGTTAGGCACACCACACGGGCATGGAGTTTTGGTACCTAAAATAAAATCGATTCTTCTTTGTTTTTTTTTGTTTGAATAATAATAATCGTTTATTGTGATGGTAGTCGTCTTCCGTCCCCGACGTAGATTATTGTTAGGTCACTGTTAAGTTTACAATTTGCAAATATGTTGAAAGTAGGAAATTTTCGCTTAGTTAGGCCTATGTTAATTAATCATCAGTTCATGAATGCAAAATGTTAATTTGCACGGTTGATGTTATAACCTTGAAAAATTCGATCTTTTTAAATCAGCCATGATGCTAAATGACGTATAGTTGATGGCATCAATGTTGATCCATTGAACGTGTAGCACTTTTGGGTCTTGAACTGGCATGGAGGATACTGGAACGCCTACTTTCCTCCCTAAAAAGTCACTCAAGGGCCCCATCTGGACCTACTACCGAGAGGATAATTATAGTTCAATATCACCAAAAAAAAAAACCATTCAACATGTGTACATTTTACATTGGTTAATTGATGTTACTGATAAGTTACAATTTTTTTTTTACCGAATTGGCATTTAGAGTGTGCCAATTTCATTGAATATAGCCGGAGTTGTACACAAGTGTGAATGTTACTGATAAGTCACAGCACTTTGAGTGTAATTATCTGACATTAATCCTACTATGAGCAGGAGCAACATCGTTCCTTTTCACCGAATACCAATACGTTGGCGTTTTCATGTCGATATTCGCGGTGGTGATCTTCCTCTTCCTCGGCTCCGTCGAGGGATTCAGCACAAAGACCCACCCCTGCACATACAGCAAGGACAAGGAGTGTAAGCCTGCTCTGTTCAATGCCCTGTTCAGCACCGTCTCCTTCCTGCTTGGAGCCATCACCTCAGTGGTTTCTGGCTTCCTCGGGATGAAGATTGCGACTTACGCAAATGCGCGGACCACCCTGGAGGCGAGGAAGGGTGTTGGCAAGGCCTTCATCACCGCGTTCCGTTCGGGAGCGGTGATGGGATTCTTGCTGGCATCAAATGGGCTTCTGGTGCTTTACATTGCCATAAACTTGTTCAAGATGTACTATGGCGATGATTGGGAGGGTCTCTTTGAGTCCATCACTGGCTATGGCCTTGGTGGATCCTCAATGGCTCTGTTTGGAAGGGTGGGTGGAGGTATCTACACCAAGGCGGCTGACGTCGGTGCTGATCTTGTTGGCAAAGTTGAAAGGAACATCCCTGAAGATGATCCTCGGAACCCTGCTGTAAGTTTCTGGCATATAAAGTTGCACACTGTAATCCCTAAGAAAAAAAAAACTGCCCATGATAAACTGACAATTCTATTTTCAGACTATCAACAGTAGAATGTTGCAAAAAGAAAAAGCCTAATTAAGTAGTAAAGAGATAGTTGTTCATTGTTTTTTTTGGTGCTTCATGACTGAAATTGCCTGTCCTGTTTCTCAGGTGATTGCTGACAATGTTGGAGACAACGTTGGTGATATTGCTGGAATGGGATCAGATCTGTTCGGGTCGTACGCTGAATCTTCCTGTGCTGCCCTTGTTGTTGCTTCCATTTCTTCCTTTGGGATCAACCATGATTTCACTGGGATGTGCTACCCGCTGCTGGTCAGCTCCATGGGCATCATTGTCTGCTTGATCACCACTCTCTTTGCCACTGACTTCTTCGAGATCAAGGCCGTGAAAGAAATCGAACCGTCACTAAAGAAGCAGCTCATCATTTCTACGGCTCTGATGACTGTTGGTATTGCACTGGTCAGTTGGTTGGCGCTCCCATACAAATTCACCATCTTCAATTTTGGTGAACAGAAGGAAGTCACTAACTGGTAATTTTCTCGCTACCACTTGCTATACTTGTGTTTTCATGAGACATGTCTCCTGATTTATTGTGTCTATTTGATGATTTTCAGGGGGTTGTTCTTGTGTGTTTCGATCGGTCTATGGGCTGGTCTGATCATCGGATACGTGACAGAGTACTACACTAGCAATGCATACAGGTAAAAAAAAAATTCAATCAGTTACCAATGGCATATTCTTTGTATGCTAGATGGCTGTGTTTTTAACTTTTATCATGTTGCCACACTGCAGCCCTGTTCAGGATGTCGCAGATGCTTGCAGAACTGGTGCTGCCACCAATGTCATATTTGGGCTTGCTCTAGGATACAAGTCTGTTATTATCCCAATTTTCGCTATCGCGCTTGGTATCTACGTCAGCTTCACCATTGCTGCGATGTACGGCATAGCAGTGGCTGCCCTTGGCATGCTGAGCACAATTGCCACTGGACTGTCCATTGATGCTTATGGTCCGATCAGCGACAACGCCGGTGGTATTGCTGAGATGGCAGGGATGAGCCACAGAATCCGCGAGAGAACCGACGCTCTTGACGCTGCTGGAAACACAACCGCTGCTATTGGAAAGGTAATAATCATTTCGACAAATCCTTTGTAGCATACTCAGATAGGAACAAGCTTAAACTGATCATATTTTGGCTATGTGAAACCATGCTGTGAAAGGACATGTGCCTAGTGGTTACAGTGACTTGAGTAGCACCCTAAGGTCCTGAATTCAAATTGGGTTATTTGAGGGCTAAGTTCCATGTTTGAAAGGCTAAGTTACTAAATTTAAAAATACAATTCTCTAAAAAAAAGTGAAACCATGCTTGCATAGTGGCAAACCTGAACATTGCACTGTTCATTTTCAGGGTTTTGCCATTGGGTCAGCAGCACTGGTGTCCCTTGCACTGTTCGGCGCCTTCGTCAGCAGAGCCGGGGTGAAGGTGGTCGACGTCCTGTCCCCCAAGGTGATCATCGGATTGATCGTCGGAGCAATGCTCCCGTACTGGTTCTCCGCCATGACGATGAAGAGCGTCGGCAGCGCGGCGCTGAAGATGGTGGAGGAGGTCCGGCGGCAGTTCAACACCATCCCCGGGCTGATGGAGGGCACAGGCAAGCCGGACTACGCCAACTGCGTCAAGATCTCCACCGACGCCTCCATCAAGCAGATGATCCCTCCCGGCGCCCTCGTCATGCTCACGCCGCTCATCGTCGGCACCCTCTTCGGCGTCCAGACCCTCTCCGGCGTCCTCGCCGGCGCCCTCGTCTCCGGCGTACAGGTATGCACAAGAGACGATCATAGATCATGTCACTGAGTGACGGATTCACCTGACCTGACATTCTTACAGGTCGCCATCTCTGCGTCGAACACCGGTGGCGCATGGGACAACGCAAAGAAATACATCGAGGTGACGGCGATTCTTGCATCGATTACTCACTACTGTTCTTGCATCATCAATCGATCTGTTTCTTGATGCGAATATGGATGGAAAATGTTTCAGGCTGGGGCGAGTGAGCACGCGAGGTCGCTGGGGCCCAAGGGATCGGACTGCCACAAGGCGGCGGTGATCGGCGACACCATCGGCGACCCGCTCAAGGACACGTCGGGCCCGTCGCTGAACATCCTCATCAAGCTCATGGCCGTCGAGTCGCTGGTGTTCGCGCCATTCTTCGCCACGCACGGAGGAATTCTATTCAAGCTCTTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005419