BGIOSGA005422

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Revision as of 02:22, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005422| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005422, complete gene.| tag = OsI_093...")
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Gene Name

BGIOSGA005422

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005422, complete gene.

LocusTag

OsI_09314

Ensembl Transcript ID

BGIOSGA005422-TA

Ensembl Protein ID

BGIOSGA005422-PA

Length

7366

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36190129..36197494

Sequence Coding Region

36197369..36197494,36197170..36197270,36196322..36196419,36195320..36195519,36195069..36195233
,36191183..36191311,36190995..36191059,36190488..36190611,36190321..36190389
,36190129..36190152

Genome Context

<gbrowseImage1> name=IndicaChromosome02:36190129..36197494 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:36190129..36197494 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGCGGCGGCGTGGTGAAGAAGGAGATCGGCGGGAACCACGACGTCGTCCGCTTCGGCGTCAACGACAGCGTCAAGGGGGACCTCGCGCCGCCGCACCCGCTCCAGGCCAGCGTCCACAAGGAGGCCAAGTTCTGGGCGGACAAGAAGAGGTTCGGCGCGGAAGCCATCTACGGATCCGCCTTCAACATCCGCAAGGATCTTGATGCCCAAATCCTCTCCAAGTTCCAAAGGCCCCCTGGTGCATTGCCGTCATCTATGCTAGGATATGAGGCACTGACTGGTTCCTTAGATGATTTTGGGTTTGAAGATTATCTTAACTACGCTGCGGCCTCCGAGGATGGCTGGGTCCTGGGGCGTGGAGCTCTGGAATTGCTGCTCGGCGGCACCGCCTACACACAAGCGACAAGTGCGCCACAAATCTCTCTCTCGATGCAGCAAGTGCAGCGGAGGGAGCTGCAACTGGTCGCCGTTTCTGCCATGCTGATAGATTGCAAGTACGAGGAGATTTGGGCCCCAGAGGTGAACGACTTCATCTTCATATCAGATAGTGCATACACTAGGGAACAGATTCTTGCAATGGAGAAGGGGATTCTGAATAAGCTTCAGTGGAATCTCACCATTCCTACACCATATGTCTTCATTATGATGCTATCTGCGTCTGCAGATAACAAAAGTGACAAGGAGATTTCAAAGGAGCATGGGGGTTTCATGAGATTTATCCAGGTTTCTTGCCTAGGAGCATCGGCCTCTTCTTCTAGAATGCTGAGGGCCAAGGCTGCTGGGGAAGAATCTGTGTTGAAGGAATTTCCTGAGGCTACAATTATGAGGCCTGCAACTATGATTGGCACAGAAGATTGGATTTTGAACAGATGGGTACAGATTCAGCCTGTTTATGTTGTGGATGTTGCTGCTGCTATTGTCAACTCCCTCAAGGATGATGGCACCAGCATGGGAAAGAGCTACGGACTTGGTGGACCAGAGATTTATACTGTTCATGATCTGGCTGAGCTGATGTATGAGACAATATGTGAATGGCCACGGTACATCGATGTTCCTCTTCCTATTGCAAGGGCTATCGCATCTCCTGAAAGCTGA</cdnaseq>

Protein Sequence

<aaseq>MASGGVVKKEIGGNHDVVRFGVNDSVKGDLAPPHPLQASVHKEAKFWADKKRFGAEAIYGSAFNIRKDLDAQILSKFQRPPGALPSSMLGYEALTGSLDDFGFEDYLNYAAASEDGWVLGRGALELLLGGTAYTQATSAPQISLSMQQVQRRELQLVAVSAMLIDCKYEEIWAPEVNDFIFISDSAYTREQILAMEKGILNKLQWNLTIPTPYVFIMMLSASADNKSDKEISKEHGGFMRFIQVSCLGASASSSRMLRAKAAGEESVLKEFPEATIMRPATMIGTEDWILNRWVQIQPVYVVDVAAAIVNSLKDDGTSMGKSYGLGGPEIYTVHDLAELMYETICEWPRYIDVPLPIARAIASPES</aaseq>

Gene Sequence

<dnaseqindica>1..126#225..325#1076..1173#1976..2175#2262..2426#6184..6312#6436..6500#6884..7007#7106..7174#7343..7366#ATGGCGAGCGGCGGCGTGGTGAAGAAGGAGATCGGCGGGAACCACGACGTCGTCCGCTTCGGCGTCAACGACAGCGTCAAGGGGGACCTCGCGCCGCCGCACCCGCTCCAGGCCAGCGTCCACAAGGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCCCCCCTCTCGCCCTCGAAACCCTAGCTAACACGCTGAATCCCCGCCGCGCGCGCAGGAGGCCAAGTTCTGGGCGGACAAGAAGAGGTTCGGCGCGGAAGCCATCTACGGATCCGCCTTCAACATCCGCAAGGATCTTGATGCCCAAATCCTCTCCAAGTAATTCACTGTCCTATCCCCATGTAATTTCCGCTGCAATACCACCATCTGTCCAAGTTGATAGATAGGCACTAGTAGTTCCATCTGAGCAGGCAGTATTACATGTCTTGTTGGAACTGTTAGGTCCGTAAACTTAAGTGGGCTGGCTTATTATGGGCACGAGATATGCATATTTGAATTCGATGTGGTTTATATCCTCCCTGTGTTTGTTAAGATTGCCCTTGCAGTTAGCTCGTTTTTTTTTTTTTTTGTGTGTGTGTGTGTCTAGTTGTAAATCTGGTAGTAGCTCTTTGCATTTACTGCAAGTCTGCAACTCTTTTCCTATGTGCGTATTATATCAGTGATGTTATTGTTGGTGGTCATCAGTTGTATTCTGCTGACAGTGTGCAAATTCCTTCTGAAACTTCTTGTTATATACGCCAATTTTCCTGGTTAGAATAGTTGATTCTCAAAATATTGTGCATGTGTAGTATTTTGAGCATCTCCACATATCGATATGCTCAGGTTACTAAGATTTTGTTGATGCTTTGTATGTTCTAGTATGGATCACTCAGAATGCTTGAATCCCTTGGTCTGGTTGAATTCACAGTATCTTGATGTTGTTTTTGTTTGTCTGCCCCTTCTAGTAACAATTAGCACATCAATACACTGCAAATAGGAGAAAAACAGCACGCACAACTCATCTCCATTGCTTTTAATTGGGCAGGCTAACATGAAAGATGTTTTGATTGATGATTTATCTGTTGCCAGGTTCCAAAGGCCCCCTGGTGCATTGCCGTCATCTATGCTAGGATATGAGGCACTGACTGGTTCCTTAGATGATTTTGGGTTTGAAGATTATCTTAACTGTAAGGATTGCTGTCCTTTGATTTCCCCTGAATCTTATTGCTTGCTTTTCACATTTCTTTGCAACTATTTGGGAACCAACTTTTGCTTATTTATTATATTCATGTTTATGTTCTTTATTGGAGTCAGGGAGTGCCACCAAAGTTCTATTTACCTTCATATGAATTCTTGTTTGTTTACTTTTAACAGGGCAAAATTGTGTAGTCGTTTTTCTCGAACATAAAACTATGTAGTCTTGTGGCATCTTGGTATTGGTAGTTTAGAAGTTCTTGGAAAACAAAGGGTCATCTTGATAGATTTTTGGTGTTAGGATGTACTACCTCTAGACTCTAGTCAAATTTATTCGGCGTTAGAAACAATGCCAAATAAATTTGGCTGGAGGGAGTACTTGAAATAATAATAATTATCTCAAATTGGTTGTTTTATTCCGTCATCATGATATCCACAAATTATATATTTTGCTTCTGTCGGTGCTTTGAGCTTGGTTTGGCTTTAGTTTCCATGCAGAACTTACATCTCATCACCATTCATTAATGCTGATTTATACTAATCACCACAAAATACAGCCGATATAGACTATATTTCAGTTCCACCGCCCTTGCGCCAACTTTTTTCTTGTCAAGTATTTACTCGTCCTATTGTTACTTATAAAGAAGAAGAAAAAGAAGGATTCAAGCACCAAGAAGCAGCCGGCGAGGGAGGCCGCTGCTGCGAACAGCGAGTCGAGGGCGATGGTGGCGGAGAGGGAGAAGGAATACGACCGGCTGTCTAAGTTCCTCGTGGTCTACCTCAATGCTATTTGAGACGCTGCGGCCTCCGAGGATGGCTGGGTCCTGGGGCGTGGAGCTCTGGAATTGCTGCTCGGCGGCACCGCCTACACACAAGCGACAAGTGCGCCACAAATCTCTCTCTCGATGCAGCAAGTGCAGCGGAGGGAGCTGCAACTGGTCGCCGTTTCTGCCATGCTGATAGATTGCAAGTACGAGGAGATTTGGGCCCCAGAGGTAGCAACATTTTATCCCCTTTGCTCTGCACTGTCCATTTCTAGCAGGGACTTGTTCTGATTGGATCTCTGTGTATGTATTTGCAGGTGAACGACTTCATCTTCATATCAGATAGTGCATACACTAGGGAACAGATTCTTGCAATGGAGAAGGGGATTCTGAATAAGCTTCAGTGGAATCTCACCATTCCTACACCATATGTCTTCATTATGATGCTATCTGCGTCTGCAGATAACAAAAGTGACAAGGAGGTAAAGAGCCATGGCTTTTGTTTGTTTCTGTTTACCACCAGATTATATTTCATTGCTAAGCGACAAGTTTAAGCGTGTACTCAAGATTTCTTTTGGTGAATGCTGATGGAGCACATGGCCTTCTTCTTCGCTGAATTGGCACTGATGCAGTACGGGCTGGTGGCATATGCCTCTGCTGTCTATGCAGCCAGGCCCAATCCTCGTCATTTCTATATATGAAGAAATTGCTGGATCCATCCTCTCGGCTAACTAGGACGTTGTTCCACTAGATCTCCATTATTCCTAGTGCAGGTTCGTCACTTTGTCCCCAATCGAGCTAATTCTCTTTCCAATCATTATTGTGATTATTGCAGATTTCTTTGTGGCCCAGTTATCAATTTTCAACAGATTTCAGTATCCGAATCTGCTCCTTCTTTCCGATACAACAATATTTGGACTAGCAGATTAACTACTACATTTCGCTGAACTAGCTCCTTCGGTTTCATCACAGGTTTATTTGGATTACATAATCCCCTATCGGTTTAGTTCCCTTTATTGTTGAACAATTGGAGATAATATCTTTCACGGTATGGACAAACACTAGAAATCTGTTTTTTAATTGCTAACTATGCAATTCCTACATACGCTAATTTGTTTTCCATTTTTCCTGTTTTGTTATTATTCATGTTATTTTTGCAACAATCCAGCAGCTTTGTATTTCATACTGGTGTTCGTATTTTTTAATTGTACCAGGGAAACTCTGAGCAGTTATCTTCTTCACTTAATCATTGCAGATAATTCGTACCACTGAGCAAAATTCAATGATGCAATTATTTTATATGCAACTCATTTGGTGAACAAGATGTATCTTGTGGCAAACAACGAGATGAAAAGTTACTTGATCCTTCAGGCATACCTGTGATTTTCCAATCTATTCTTTGCACGTTCTTGGAAAGATTGGTTGTCCCTGATAGCTGTCCGTAGTGATTCATGGATACTGTGTGGCATTTTACTTTGGGGCTCATTTTGGATTTGATAAAGAAGTCAGGTTTGCTCCTAATTCAATTTTTTCCCTGTTGATTTGCACCACCTTTTCTCAAGCCTGTCATTTTAATTATATATGCTCTACCACTCTACTAATTAATTCTCACTCTGTGTGCAAGGATGTGTGGTAGTGCAGTCACATACTTACATGTTGTGAGTCTAGATTATTTTAGTGACACATATCATGATTTACAATCTGACAACGAATCATTCTAAAATGATTTGCTCCATTAACTGTCTTAATTATCACGAACCCAGATTTGGTTTGTCACAATATTAACTCTTGATAAATCCTTTCACGTAAATCAACAGACTACACTTTGTTAAGTCCGCCTCCCAAAGAAATTTTGCTACCTTCTGTCCACACCTCTAAACAAAACCACCTATGATAGCTAAAAAAATACCAATCCGAATTAAGATAATAAGTTTAGCCGTCACCATCTTCTCAAATTGCTTTTTGCCCACATAATTAGTCAGAGTGATCAGCTGAATGCTTTTCCCACTCAGCAGTGCTCTAAAATGTTACTGACAAATTCATTTTGCCAAACAAATTTAGTTCATTTATATTCCAGAAATGTATATGTCCTATCAGTTGAACATACTTGCAGGGATTATTCCTTGAGTCCTTGTCTCCTTGAAGTTAGTTGTTATTGTGCCAATGTTGAAATATTCAGTACATTTGCTGAATTTTCATGCTTTATTGCTCTGCAAACCATGGTTCCTGATTTCTACTCTGTGTACTATTTTGGTTCAGACTGGTTAAATGTGTTGGAGTACTTCAATTTTTACTGTTTCATGAGTTCAAAATATAAATTAATCATTCCAGTGAAGCATCGTACTGTGCTATTCTGAGTTGTATGCTGCAAAGGTTAAATTGTGCCTCCATCCACTTTCAAACTGAAATTATCACGGAAGAATGTACAGCAAATATTCTCTTCACCTATCTTTTCTGAAGTAGGAATGTGTCCTAATCCAGTTTCACTTTTTACCCTGCTGCTCTGAATAATCAACAGAAAGAGATGTTCTACTGCTTTGTACTTCATCTCTGGCTGCTACTAGCACTCTGAAGAATCACCCTGAGCTTATCACCCGTCATTTCCTCTCTCTCCTTTCTCTCTGTCTTGGTTGAAATTACATTTTGATTGGTTCTTTGACAACTGTGGAGCAGATTGCCAAGAGAAGGTCAGCTCATCTGCTGAAGTATCCTACTGTGACGATTATAAGCCCTGGGATCAGTAACACTAGAGTCCATTCAAGACTCCATAAGTAATGCCATGGCAGATGTGCATATTTGCTCTTAATATAATAAACACCAGTTGTGTACCTTCGGATAATTTATATTGCAGTTTGTCAAGAACATAGCTAAATTCTAATTGAGAAAGGAAGTTCTGCATTGAACGGATCACAGTTCTTATGATTTAGTGTAAATGATTCAGTCAGGCCGTGCATTTTCCATAGTTCATTTTCAAAAAAACCTTGTTCTTTAATGGGTCTATCTGTAAATGCAGAGAGCACATACCTTATTCAAATAATCAAGATAGATCAGATTATTTTCCTTTTGATAAAATTTATCGAGTTAAATTCAAGCCAGATAGACCCACGGGAAGTTTATATATGATGTGTGTAGTATGCATGAAACTTAGGATGTAGGTTTTCTTAGTAAAGTTACATCCTACAAAATAATGTTCGGATACACTACACTTTCCACATTCGCATACAATTACTAATTAAAAAAAGATGTTAGCACCACAACAGCCCACTGTATTGTTTGCAAACAAACACTTCATAGCCACAATTACTACAGGTGGAAAAAAAAACTACCTCATCTTTATTAACCCCCACCTTCTTGCACATACTCTGCATCCACTACTTATCAAAACTACAACTTTTAGATTTGTTAACTATGTCTATAAAATACTATGTCCGTCTAGGAATGCGCCTTGGATTCTATGTATTATCAATGCAATATTTAAAACTTATAATTACATTTTTACAACTATTCATATACGAGTTCTATACACTCAGTGCTAGGTCCTAACAGAATGCTGAGGCCCTCAAGTTCAAAAGATTATCACAGAGCCGGCAACAACTCATTGATTGGTCAGTAAAAATAAAGGTAAATAAAGAAGCGTATTCAGTATTGGAAAACGTGCAAACAAATACTTATTATACATATTTTCAAAAAAAAAAGCTATGAAAAATTACCATCTTTCAAGTAAAGCAACAATTCTTAACTTAAAGAAAAACTTAAATATTTATCGATAACAGTACAAACCTAATGTAAAAAAAAGTTATAAATCAATTTATTCAAATTTGTGACAACTCTCACGGCACGCCGCGCAACCACATCTAGTAGTTTATATGGGCACTTGACCTCCCTAGTACAAGGAAATAATCATTATTTCTCCCTAATTAAGACTTTCCTTGTTGAAAAACTTTCCAAATCTCTAATCCTTGATTGTGTTGTTGCTGCTTGCTGCGCATGTGCCTGGCTTCCATCTTTGCTGCTTGCTGCACATGTCGCCCCACATGACACCTTCACTCTTCTTAGAGCAGATACAGTAGCAGACTATAAGCCAGCTATAAACATATTTGAGGAAGATAAAAGAGGAGAGATAAGAGCAGATAAAAGAGGAGAGATTAGAGCAGCGGGCTATTAACACTTCTTTTGTGTTAATTCCCATCAAGACTTCTTTTGTGGCTGGCTATTAACTGTGTTATGGACTATGCACAGATTTCAAAGGAGCATGGGGGTTTCATGAGATTTATCCAGGTTTCTTGCCTAGGAGCATCGGCCTCTTCTTCTAGAATGCTGAGGGCCAAGGCTGCTGGGGAAGAATCTGTGTTGAAGGAATTTCCTGAGGTGATCATCTGCATTAGGCAATACTGAACTTCTGTTTCTATACTACCCAAAGTTAGAAGCAAACATGTCCCATTTATGTTGGCGGTTACTTTAACCAAACTTCTGTGTTGCATGGATCAACAGGCTACAATTATGAGGCCTGCAACTATGATTGGCACAGAAGATTGGATTTTGAACAGATGGGTACAGTTTGCCAAAAATTGATTCCCGGTCTACAAAGTAATTGAGCTTTCCTGTTGGCTGTTGTCGTAATCCCTTGACTCAAAATTTAGTCTAGAACATTAATTGATCAGAGAATACAGGCCTCATCATTTGCCCTATGGCTTGATTTGAATTTTAAAACTTGATTTTGAAGTTGGTTTTGATGCTTTTACAACGTAGTTTCTTTTTCAGCATTAGCTTTTATTTAAGCCACTAAGGACACATGTAAAAGTTTTACTCATAAATTACTTTTTTTATCACTAATAAGCCATTACGGCTTTTAATCAGTCATAGGCAATCAATGGGGACCTGCATCTTAAACTTCCACAGCAGGTGAGATTACATGAATGCAACCTTTTGGTTTTTGCAGGATTCAGCCTGTTTATGTTGTGGATGTTGCTGCTGCTATTGTCAACTCCCTCAAGGATGATGGCACCAGCATGGGAAAGAGCTACGGACTTGGTGGACCAGAGATTTATACTGTTCATGATCTGGTAATTATCATGCACAACATTTTGTTATGCAGCAATGAACGAATCTTCAAGTTGGTTGGTCAGAGTTTTTTTATATAAAAATGTTCTGGATGTTACAGGCTGAGCTGATGTATGAGACAATATGTGAATGGCCACGGTACATCGATGTTCCTCTTCCTATTGCAAGGGTATGAACTTAAATAATATCTTGTGTTGGTCAAGGCGAATGGCCACGGTACATCGATGTTCCTCTTCCTGTTGCAAGGGTATGAACTTAAATAATATCTTGTGTTGGTCAAGGCAACCTGAGTATTGGATTGTCTCGTCTTTTGACCGTCATGCTTTGGGTTGTGCAGGCTATCGCATCTCCTGAAAGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005422