BGIOSGA005428

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Revision as of 02:22, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005428| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005428, complete gene.| tag = OJ1695_...")
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Gene Name

BGIOSGA005428

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005428, complete gene.

LocusTag

OJ1695_D07.10

Ensembl Transcript ID

BGIOSGA005428-TA

Ensembl Protein ID

BGIOSGA005428-PA

Length

5325

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36094452..36099776

Sequence Coding Region

36099618..36099776,36098073..36099002,36097510..36097686,36096617..36096756,36095391..36095501
,36094452..36094497

Genome Context

<gbrowseImage1> name=IndicaChromosome02:36094452..36099776 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:36094452..36099776 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCGCCGGGAGCAGCCGCGCCGATGCGCCGCCGCGGCGGCGGGCGGCGGCGCGCGGCCTCGGGCTCGGGCTCGCGGGGTGCTTCGGCGGCGGATCCTCTGGGGCGGCCACCGGAGGCGGCGGCGCGACCGCCGCGTCCTCCTCGCGAGCTCACGAGGTGGAATCTTGGCAAGCAGCTCGAGCGGTTGCTGAGATGGACTTTCGGGCTTCTGTCGCTGCTAAGGATATCCGCATATCAAGTGAGTCAGATCCAAGAGTGCATCCATCTTCAAGCACAATAAGTCATCATCTCAGGTTCAATCACTTAAACAGTCACGAAAACAAGGAAGATGCCCTGGGAACAGAAATCGCTGAAACAAGTGTTCGTCAGAGTTCATCAGGAAAGGAAGTCATGCCTAGGGGAAATTTCAGTAATGAAGTTGCTTATGCTGAGATAACGTCTAGAGAAGGAATCAGTCATATTGGACGAGATATTTTAGAACCTGCAGCAAACAATGCTGAGACTGACACAGTTTGCATTCCAGAAGTTGGTGGCCCCGTTTCTGAATCTGGTTTCTCCTCCTCACAGAGGGCATCTGAAAGGATCATGGCTGACTTGGAGGCTGGAGAGATTGCTCATGGGACTTCATCCACAACTATTATGTCAAGTGAAAGATCAGATACTTCTCAATCTAGCTTAACATCTGTGTTGCCTGCTACTTCAACTGCACCATCTACAATTGGAGAATCACTTCCAGATACAGTCCCTAGCAGAGAAGATGTCCCCATATTTAGTGGGACACAAGGTGAGATTGGTGGAAATACATTACATGATGACATGATGAGCATTTTCTCAAACGATGGTCCAGCGCGTGTTAGAGATTCAAGCAGCAATGAAACGAGGAGGAGCCATAGAAGGGTTCTGTGGGACACATTTTCCAGACGTAGTTCAAGAGGATATTTAGATTCTGATACTGATGATCTGGGATTTTACAGCAGATGGCTAGACCTTGGTGATGAACTTTTTGCGGATGAGATTGAGGAGGCACGGTTCTTTCATCGGAGACGCCATGGTTCAATCAGAGTAAGCCAGTATTCAAGATCTCGGATTAGGGAGCATCGGCGTGCTGTTTTTGATAGCGGTACTGACCAAAGTACCGTTGCTTGTCCTTTGGGGATCCACCAAATTGGCAGATGCACCTGTGATTCCTTCTTGATTGCTGAAGAATCTAGTGCCCGTGCAAGTATATCAAGAATTGTCATGTTAACCGAGGCATTATTTGAGGTATTGGATGAAATTCACCGGCAACCTGCATCACTTTCGCTTTCCATGGTCTCTGCCCAGGCTCCAGAATCTGTGGTTAATTCATTACCATGTAAGAGCTACAAAAAGCAGACAGCCCAATGCAGTGATGACATGGAACAGTGTCACATCTGCTTAACTGAATATGAGGATGGAGATCAGATAAGAAGCCTCCCGTGCAAACACGAGTTTCACTTGCTGTGTGTTGACAAGTGGCTCAAAGAAGTACACAGGGTCTGCCCGTTGTGCCGTGGGGACGTGTGCGAAGGTGCCGCCTGA</cdnaseq>

Protein Sequence

<aaseq>MGAGSSRADAPPRRRAAARGLGLGLAGCFGGGSSGAATGGGGATAASSSRAHEVESWQAARAVAEMDFRASVAAKDIRISSESDPRVHPSSSTISHHLRFNHLNSHENKEDALGTEIAETSVRQSSSGKEVMPRGNFSNEVAYAEITSREGISHIGRDILEPAANNAETDTVCIPEVGGPVSESGFSSSQRASERIMADLEAGEIAHGTSSTTIMSSERSDTSQSSLTSVLPATSTAPSTIGESLPDTVPSREDVPIFSGTQGEIGGNTLHDDMMSIFSNDGPARVRDSSSNETRRSHRRVLWDTFSRRSSRGYLDSDTDDLGFYSRWLDLGDELFADEIEEARFFHRRRHGSIRVSQYSRSRIREHRRAVFDSGTDQSTVACPLGIHQIGRCTCDSFLIAEESSARASISRIVMLTEALFEVLDEIHRQPASLSLSMVSAQAPESVVNSLPCKSYKKQTAQCSDDMEQCHICLTEYEDGDQIRSLPCKHEFHLLCVDKWLKEVHRVCPLCRGDVCEGAA</aaseq>

Gene Sequence

<dnaseqindica>1..159#775..1704#2091..2267#3021..3160#4276..4386#5280..5325#ATGGGCGCCGGGAGCAGCCGCGCCGATGCGCCGCCGCGGCGGCGGGCGGCGGCGCGCGGCCTCGGGCTCGGGCTCGCGGGGTGCTTCGGCGGCGGATCCTCTGGGGCGGCCACCGGAGGCGGCGGCGCGACCGCCGCGTCCTCCTCGCGAGCTCACGAGGTATCGGCTGAGTTGGGATACCGGAGGGTGTCGCCGTTCGGGCACGCGTGGATTAGCCTCTGCGGAGGGGGGGGGGGGGAGTGGATGGATTTGTGGTTCCGGAACCTATAGGGTGTGGGATTCGGGGGTGGTGGTGATTTCATGGCATATATTTTGGTTTGGAAAAATCACGGTGACTGTGAATCGGAAAGTAGATAAGCTTTTAGAGGTTTTAGTTCCCATTTTTTTTGAACTGCTTGCTTGTTCAATGATGATAGGTATGGGTTTGACTGAAAATAATTGTGGTCCTTGCTTTGCATATATGGGGCATGCAAACATGAATATTTGAGTCTGAACTTGATAGTCTACTTGCCTAGTGAATGCTTTGCAATTTTGCAGCAAATGCAAATGAATGGAGGTTCAACGGGTCACTCACTGAATTTATCGTTCTGCACTTAAAAGGGCTGCTTCTGAGTGGCAAGTTGAAAAAAAAAACTTTACTAATTTTACAAACGTTGAACACTCTCTATGCTTAATTGCCAGTGGATTCATAATTTCAGTCAATTAGATAGTTGCATTCTTGTCCTTCTTTTGTTTGCTGGTTGTTTTCTGATTCCAAAAAGGTACTACCTACAGGTGGAATCTTGGCAAGCAGCTCGAGCGGTTGCTGAGATGGACTTTCGGGCTTCTGTCGCTGCTAAGGATATCCGCATATCAAGTGAGTCAGATCCAAGAGTGCATCCATCTTCAAGCACAATAAGTCATCATCTCAGGTTCAATCACTTAAACAGTCACGAAAACAAGGAAGATGCCCTGGGAACAGAAATCGCTGAAACAAGTGTTCGTCAGAGTTCATCAGGAAAGGAAGTCATGCCTAGGGGAAATTTCAGTAATGAAGTTGCTTATGCTGAGATAACGTCTAGAGAAGGAATCAGTCATATTGGACGAGATATTTTAGAACCTGCAGCAAACAATGCTGAGACTGACACAGTTTGCATTCCAGAAGTTGGTGGCCCCGTTTCTGAATCTGGTTTCTCCTCCTCACAGAGGGCATCTGAAAGGATCATGGCTGACTTGGAGGCTGGAGAGATTGCTCATGGGACTTCATCCACAACTATTATGTCAAGTGAAAGATCAGATACTTCTCAATCTAGCTTAACATCTGTGTTGCCTGCTACTTCAACTGCACCATCTACAATTGGAGAATCACTTCCAGATACAGTCCCTAGCAGAGAAGATGTCCCCATATTTAGTGGGACACAAGGTGAGATTGGTGGAAATACATTACATGATGACATGATGAGCATTTTCTCAAACGATGGTCCAGCGCGTGTTAGAGATTCAAGCAGCAATGAAACGAGGAGGAGCCATAGAAGGGTTCTGTGGGACACATTTTCCAGACGTAGTTCAAGAGGATATTTAGATTCTGATACTGATGATCTGGGATTTTACAGCAGATGGCTAGACCTTGGTGATGAACTTTTTGCGGATGAGATTGAGGAGGCACGGTTCTTTCATCGGAGACGCCATGGTTCAATCAGAGTAAGCCAGTATTCAAGATCTCGGGTAATTGTCATGCCTATTGTGTTTGTGCCACAATTACACATTTGGAATAATGTTGTTGGTGCTATCATAACCAAAAGGTGGTCATGAAATGTAAACGTAGGGTTACACTGGTTTGAATTGTCACCTAATATAATATTAGTAGTACACAAATCTGCAACAATAATAACTTCCTCTCTTATCTGATCAGTATATTTATAATTATGTGAAGTAAAATACTTTTTCTCTGTCTGCATATCCCGTCTCATGCAATTTCACACTGTCCGATGTGGTCTTACTCCTGGTTCATTGATGTGCTGAAATTGCTGTTACGGTCTAGTGTCAGCATTATCTGCCGCTTGATCTCTCATGCAAACATATCATTAACTTGGTAATGTTTTCTGTTACAGATTAGGGAGCATCGGCGTGCTGTTTTTGATAGCGGTACTGACCAAAGTACCGTTGCTTGTCCTTTGGGGATCCACCAAATTGGCAGATGCACCTGTGATTCCTTCTTGATTGCTGAAGAATCTAGTGCCCGTGCAAGTATATCAAGAATTGTCATGTTAACCGAGGCATTATTTGAGGTTTGTTCGTTCCCTATCTTTCTAAAATGTAGCTCCTTTTGTATCAGTATTCTGATGATACTGTTTCTTCTGCATGGCTTACCTATTGTTTGCGTGTGTGTTCTTTTTTATGTTTCTTTCTTTTTTTTTTGTGTGTGTATAGGCTTGGCCAGCCCAAATCATTGAAGTATTGAGAAGTTTTTTTTGTTCTGTATATTCAGGTCTTATTCGTTAAATAATAATTCCCAGCATTCGAACTATGCACACTTAATAAGATAGTGATACAACTGAAACTATCTATGTGACGAAGTCCCTTAGCTGCCATTATACTTTTGCGGATGATTGACCTCCAGTTCCATCCTTCAAGTTCAACCTAGCAATGCTGTAGTCACTTATACTCAAATTTGAAAGCATTAAGTTAGGCTGCATGAACTCCAAGTATGTTCATGATTTAAATTTGATGTTGAATACATTGGTCATATCAACATGTTTAAATTTGTATCACCTGGCAACAACACAATACAGTTTGTCATAGATGTAGTATCAGGACAACAATATTTTGAAGGCAGTGTTTCATGGCTATATTGTGAAGCCAAGACTGAGCGAGAAAAGCAAGAATCAAACTCTGGATTTCCAGGCTTGTTATGGAACATATGGGGAAATTAGTTAAACTAGGAAAGGCTTACTAGGGAGAGATCAACTTTACTGCTTGTTGTTGCATTTACATATCCTTCTGTCTACCTATTTATTATTTGACTTTGTAATTCTTCACAGGTATTGGATGAAATTCACCGGCAACCTGCATCACTTTCGCTTTCCATGGTCTCTGCCCAGGCTCCAGAATCTGTGGTTAATTCATTACCATGTAAGAGCTACAAAAAGCAGACAGCCCAATGCAGTGATGACATGGAACAGTGAGATTCTTACCATTCAAATTTTATCATTTACCTATTGTCACCTAGGGCCAAAAATAGTTCTGAGTGTCATTGAAGAAAGTCAAGTTCGCCGCTACAAATGCATCACAGTATCTTACGCGTTTGAAATAACTATGCTGTTCATGTCCATTATCCATCAGAAAATAAATTGAGACCCTGACAAAATCCCTATTATTTTATTTGCCTTACATCAGCCTTTTAATATGGTTGTTGTAGTAATTTTAGAGATCTTATCAAATAAGCATTTTGTCATGGGCATTGGGCCAAGGGCCAAGGTGTTTAGCGTTTTGGACCATGACTCATTTGGGGGCTAATTCTGCCTTCACGATATTATATCTATCATAGCGAGCTATCCTAAAAGTTGAAAATCACAGTGAGATTCTATTACTATATAACAAGTTATTTGTTATTCTTACTGAAACTTGACACTATTTTTTGGACTGCATATCATGATGGCACCTGAATATGCGGACAAGTTAACAACATTGGTGATAAACTATTAGAAGTTGAGGGTGCCTTGTGTTGCTCAGCAGGAGCTTTGAGGCTCTGAGTTACTTAGTAGGTCGCTAACCCTTAATGGTTTAGGTGGTCGTTTTTTTCTCCGTTGATGTTCGTTTATAATTTAATTTATGGGTCTTTTTAAGGGGTGGTGGGTTTCTTCTGCCCTCCCCCTTGTACTCTGTTCTCTTGCTTAATGAAATGATATAAACAACTCACCTACCTGGCCGAGGAAAAAATATTGGCAGTTTAAATGGTTCAGTGACCGTCAATTTTGTGGTTGATCCATTTCTAGTTTTACTTCCATGCTTGACAAGATGTTCGTTGCCTTCCATCTTCATTTCAGTCCAATATATCGGTTCTGCTTAGCACCCAGAAATTGAAAAATGTGATTCTTGTATTTCATTTTAACCAATCAAGCAGTGGTTCTGTATTCTATGCCCTAGGATCATCTTAGAGCTACAAATGCGGAGTTATATTTTGGTATAACTGTAGGTCTACCTTGGGAAGGGAATTCTGCCAAGTAGTAGTTATTTTCTTTGGCCTCTTTTCCTTATTTAAGATTCTGAAACTTCCATTGCTGAAATGTTTTTCAGGTGTCACATCTGCTTAACTGAATATGAGGATGGAGATCAGATAAGAAGCCTCCCGTGCAAACACGAGTTTCACTTGCTGTGTGTTGACAAGTGGCTCAAAGAAGTACACAGGTGGGTAGCAAACATGCCATCCTAGCTTAAAAAAAGAGAGTATTTCATACAATCCCGAGTATTATGGTTCCAGTTGCTCAAAACCACAGTAGTGGTATTATGGTATTAATCATTCACAAAACCAGACTGTTAACTAAACTTAATATTTTATCACAGTAAAAAAACAATTAACTTAGACGATGGATTAAATGAACTCATGAATTTTGAATATAAATTTAGAATTTATATGTTAGTACATGAAAGAAAAAGGGAGTAGCTATATTTATGGCATCATATTTTTCACCAAAAAATAGTCAGCATGTATTTACATGGTAAGTTCTTAAATTACATATGTAATTTTAGTGTATTTACGGTGTAAGTTCTAAAATTGCACACGTAAGTTCCAAAATTACATATGTAAGTAGAGTGTAAGTATGATGTAATTTCATTTTAAATCAATGAATATAAACATAAACATACTATAAGTCTATGAGACGTAAATTAATTCATTATATTAACTAAATTAAGTAGGTGGTCCCACAGCTAATGACCGTACATATTGATCAGATGAGGTGTACGTGCACAAACACGAATCTCACTGAACATCTAGTGGCCAAAAATATTCGACTGTGATGAGCAACAAAATGTGACGCCATAAATTTAGGAAATCCGAAGAAAAAAAATAAATATATGTATATAGCAGTATAGTTTTGTGAAACAATATGACCATAATAACTGTGGTTAAGTGTAACACGTAGAAACTCCTATTGTTTTGTGCAACTTGAACAAAAATATGTGTTTTTCTTAAAAAAATACTAAAAAAAAGGGAAAAGCAAATTCATTTTTTGCTTGGTTATGCTACTACTATATATCCCAGGCAGAGCTGCTTAATAATCACTGAATAATTGTTTCAGGGTCTGCCCGTTGTGCCGTGGGGACGTGTGCGAAGGTGCCGCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005428