BGIOSGA005432

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Revision as of 02:22, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005432| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005432, complete gene.| tag = OJ1004_...")
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Gene Name

BGIOSGA005432

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005432, complete gene.

LocusTag

OJ1004_E04.32

Ensembl Transcript ID

BGIOSGA005432-TA

Ensembl Protein ID

BGIOSGA005432-PA

Length

3873

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36032036..36035908

Sequence Coding Region

36035742..36035908,36035535..36035649,36035305..36035448,36035051..36035230,36034862..36034960
,36034623..36034750,36034423..36034528,36034203..36034337,36034021..36034098
,36033846..36033950,36033670..36033761,36033421..36033553,36033207..36033302
,36033044..36033138,36032862..36032952,36032676..36032785,36032383..36032512
,36032201..36032302,36032036..36032119

Genome Context

<gbrowseImage1> name=IndicaChromosome02:36032036..36035908 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:36032036..36035908 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGGTTGGGACGAGGGCGCCGTCTTCTACAGCGACCAGGCGCAGTTCCCGCGCGGCGGCCCCGGCGGCGACCCCTCCGCCGACCTCACCCGCCACTCCGCCCTCCGCAAGTTCAAGGAGTTCCTCCGCGGCTTCACCGGCCCAACCGGCGACTTCCCCTACCGCGAGAGCCTGGTGCACAACCGCGACCATGTCACCGTCGCCATCGAGGACCTCGACGCCTTCGACGCCGAGCTGTCCGACAAGATCCGGAAGTCTCCCGCTGATTACCTACCGCTGTTTGAGACGGCTGCGTCCGAGGTCCTCGCGAGCCTTCGGTCCAAGGTCGCTGGAGAGACCGGCGAGATGGAGGAGCCCGCCTCCGGCGACGTGCAGATCTTCTTGTCCTCAAAGGAGAACTGCCTGTCCATGAGGTCTATTGGGGCGGATTACATGTCCAAGCTGGTGAAGATTGCCGGGATCACAATCGCCGCGTCGAGGGTGAAAGCTAAGGCCACTCATGTCACGCTGCTCTGCAAGAACTGCAGGAGTGTGAAAACGGTGCCGTGTAGGCCTGGCCTTGGTGGGGCTATTGTCCCACGATCGTGCGACCATGTTCCTCAGCCTGGAGAAGAGCCTTGCCCCTTGGACCCCTGGATTGCAGTTCCAGATAAGAGCAAGTATGTGGATCTCCAGACCCTCAAATTGCAGGAAAATCCTGAGGATGTTCCAACTGGTGAGCTCCCGAGGAATATGCTGCTGTCCGTAGACAGGCATCTTGTTCAGACCATTGTTCCTGGAACTAGATTAACTGTAATTGGTATCTACAGTGTCTACCAAGCATCTGCAAATCAAAAGGGTGCTGTTGGAGTCAAACAGCCTTACATTAGAGTTGTGGGGTTGGAGCAGTCCCGAGATGCCAACTCGAATGGTCCCTCAAATTTTACACTTGATGAGGAAATGGAATTCAAAGAATTTGCACAGAGGCCAGATGCATATGTCAAGATTTGCTCAATGATTGGCCCTTCAATTTATGGCCATTCTGATGTCAAGAAAGCTATCGCATGCTTGCTGTTTGGTGGCTCAAAGAAGAGGCTACCGGATGGTGTCCGTTTGAGAGGGGACATTCATGTCTTGCTGCTGGGTGATCCATCAACAGCAAAATCACAGTTCCTCAAGTTTGTGGAGAAGACAGCGCCGATTGCTGTCTATACATCTGGGAAAGGTTCATCAGCAGCTGGTCTCACAGCGTCAGTAATTCGGGACGGTAGCTCTCGAGAGTTTTATTTGGAAGGAGGGGCCATGGTTTTGGCTGATGGTGGAGTTGTTTGTATTGATGAGTTTGACAAAATGAGGCCTGAGGACCGAGTTGCAATTCACGAAGCAATGGAACAGCAGACCATCTCGATTGCCAAAGCTGGCATTACAACAGTACTCAATTCAAGGACCTCGGTACTAGCAGCTGCCAATCCAATTGCAGGGCGCTACGATGATCTTAAGACTGCACAAGATAACATTGATCTGCAGACAACCATCCTTTCTAGATTTGATCTAATCTTTATTGTTAAAGATGTCAGAATGTATGATCAAGACAAGCGAATTGCAAGCCACATCATTAAGGTGCATGCCAGTGGTGCTGCTGCTTCATCCAAGAATACAGATGCTAGTGAAGGAGAGAATTGGCTAAAAAGGTACATTGAGTATTGCCGTGTTACTTGTAAACCACGACTCTCAGAAAAGGCAGCAGAGATGCTTCAGAACAAATATGTGGAGATTAGACAGAAAATGAGACAACAAGCTCATGAAACAGGGAGGGCTGCAGCTATACCCATCACTGTGCGGCAGCTTGAAGCCATTATACGTTTGAGTGAATCTCTTGCAAAGATGAGATTGACAAGTGTGGCTACACCAGAGCATGTTGAAGAGGCATTTAGGCTGTTCAATGTCTCCACTGTTGATGCCGCAAGATCTGGAATCAATGAGCATTTGAACCTATCACCAGATATTGCAAATGAGATCAAGCAAGCTGAGGCACAAATAAAGAGAAGGATGGGAATTGGAAGCCACATATCCGAGCGACGCCTGATCGATGAACTAAATAGGATGGGGATGAATGAATCCATTGTGCGAAGAGCCCTTCTGATCATGCACCAAAGGGATGAAGTGGAGTACAAGAGAGAGCGCCATGTCATTGTCCGGAAGGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MSGWDEGAVFYSDQAQFPRGGPGGDPSADLTRHSALRKFKEFLRGFTGPTGDFPYRESLVHNRDHVTVAIEDLDAFDAELSDKIRKSPADYLPLFETAASEVLASLRSKVAGETGEMEEPASGDVQIFLSSKENCLSMRSIGADYMSKLVKIAGITIAASRVKAKATHVTLLCKNCRSVKTVPCRPGLGGAIVPRSCDHVPQPGEEPCPLDPWIAVPDKSKYVDLQTLKLQENPEDVPTGELPRNMLLSVDRHLVQTIVPGTRLTVIGIYSVYQASANQKGAVGVKQPYIRVVGLEQSRDANSNGPSNFTLDEEMEFKEFAQRPDAYVKICSMIGPSIYGHSDVKKAIACLLFGGSKKRLPDGVRLRGDIHVLLLGDPSTAKSQFLKFVEKTAPIAVYTSGKGSSAAGLTASVIRDGSSREFYLEGGAMVLADGGVVCIDEFDKMRPEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPIAGRYDDLKTAQDNIDLQTTILSRFDLIFIVKDVRMYDQDKRIASHIIKVHASGAAASSKNTDASEGENWLKRYIEYCRVTCKPRLSEKAAEMLQNKYVEIRQKMRQQAHETGRAAAIPITVRQLEAIIRLSESLAKMRLTSVATPEHVEEAFRLFNVSTVDAARSGINEHLNLSPDIANEIKQAEAQIKRRMGIGSHISERRLIDELNRMGMNESIVRRALLIMHQRDEVEYKRERHVIVRKA</aaseq>

Gene Sequence

<dnaseqindica>1..167#260..374#461..604#679..858#949..1047#1159..1286#1381..1486#1572..1706#1811..1888#1959..2063#2148..2239#2356..2488#2607..2702#2771..2865#2957..3047#3124..3233#3397..3526#3607..3708#3790..3873#ATGTCGGGTTGGGACGAGGGCGCCGTCTTCTACAGCGACCAGGCGCAGTTCCCGCGCGGCGGCCCCGGCGGCGACCCCTCCGCCGACCTCACCCGCCACTCCGCCCTCCGCAAGTTCAAGGAGTTCCTCCGCGGCTTCACCGGCCCAACCGGCGACTTCCCCTACCGGTGCGCCCCCCCCTCCCTCCCAGATCTGGTGCCTCGTCGGATGGTCGAATTCGCTCTGACCAATCCAGTGTGTTTTTGTTTGATGGTTGCAGCGAGAGCCTGGTGCACAACCGCGACCATGTCACCGTCGCCATCGAGGACCTCGACGCCTTCGACGCCGAGCTGTCCGACAAGATCCGGAAGTCTCCCGCTGATTACCTACCGCTGGTGTGTGCTGGTTCTTTCTGAATTTTTGTTGGCTCTGGGTTCTGTTGATGTCAATTTTTTGTGTTAAGATTTAGGGTTTTGTGTAGTTTGAGACGGCTGCGTCCGAGGTCCTCGCGAGCCTTCGGTCCAAGGTCGCTGGAGAGACCGGCGAGATGGAGGAGCCCGCCTCCGGCGACGTGCAGATCTTCTTGTCCTCAAAGGAGAACTGCCTGTCCATGAGGTCTATTGGGGTCAGTTCTGAAACGATTTTGTTAGTAGCCTTGTGAAGAATTTCAATTTGACACAACTGTATTCCAAATTCCAGGCGGATTACATGTCCAAGCTGGTGAAGATTGCCGGGATCACAATCGCCGCGTCGAGGGTGAAAGCTAAGGCCACTCATGTCACGCTGCTCTGCAAGAACTGCAGGAGTGTGAAAACGGTGCCGTGTAGGCCTGGCCTTGGTGGGGCTATTGTCCCACGATCGTGCGACCATGTTCCTCAGGTCTAACTCCGGCTAAACATAATTGGGTTATTGTCTTGTTTGTGTTTTAATTCTGATGTATATGAGTGAGTTTTCTTTACCATTTTTCAGCCTGGAGAAGAGCCTTGCCCCTTGGACCCCTGGATTGCAGTTCCAGATAAGAGCAAGTATGTGGATCTCCAGACCCTCAAATTGCAGGAAAATCCTGAGGTTTGTTACTGCATTATATGTCCTCGCTGCGATGCTATGGTTTTCTAGGTTTATTGGTTATATGTCCTTAGGATTTAGCAATCACCAAGCTGTATATTACTTGGTTAACAGGATGTTCCAACTGGTGAGCTCCCGAGGAATATGCTGCTGTCCGTAGACAGGCATCTTGTTCAGACCATTGTTCCTGGAACTAGATTAACTGTAATTGGTATCTACAGTGTCTACCAAGCATCTGCAAAGTATGTTGGATCTAAAACATCTGCTCAGTTTGTTTCCATTTTGTTGAGCTGGACTACTTGCATAGCTGATGACGCTCAAATATTCATTTTGCAGTCAAAAGGGTGCTGTTGGAGTCAAACAGCCTTACATTAGAGTTGTGGGGTTGGAGCAGTCCCGAGATGCCAACTCGAATGGTCCCTCAAATTTTACACTTGATGAGGTAGATTGCTTTGCCAAAATTCCAAGTTTCTTTTTTAAGAGTGTTACAGCATATTTACAATGTTAATTTTCTTGTTGGTTTGTAGGAAATGGAATTCAAAGAATTTGCACAGAGGCCAGATGCATATGTCAAGATTTGCTCAATGATTGGCCCTTCAATTTATGGCCATTCTGATGTCAAGAAAGCTATCGCATGCTTGCTGTTTGGTGGCTCAAAGAAGGTATATTTTTGATCTTATCAGTGGCTAATATGTGAAAATACGAAGTTGTGTTGGATCCAGTGGCTAGTTGGAATGAGCTGTAACTAAACTTTCTTCTATGGCAGAGGCTACCGGATGGTGTCCGTTTGAGAGGGGACATTCATGTCTTGCTGCTGGGTGATCCATCAACAGCAAAATCACAGGCAAGTGTTTTTTCGCTATTAGAAATGAATTATCTCTAGTCCAGTGACATGAAACTGTACATTCCAACAGTTCCTCAAGTTTGTGGAGAAGACAGCGCCGATTGCTGTCTATACATCTGGGAAAGGTTCATCAGCAGCTGGTCTCACAGCGTCAGTAATTCGGGACGGTAGCTCTGTAAGCTTGTCTTCCCTGCAAGGATTATTGTGTTTACTCAAAGTTCTGTTTCCTAGAACTAAAAGACTTATTTTCCCTGTACAGCGAGAGTTTTATTTGGAAGGAGGGGCCATGGTTTTGGCTGATGGTGGAGTTGTTTGTATTGATGAGTTTGACAAAATGAGGCCTGAGGACCGGTAAGCATTGATCTATAGTCTTCTTTCTAGAAACTAAAATAAGCATTGCACATGTAATTTTTCCTTACTCTTCAAAGTTGAAACCATATTGAGTTACCTTTATGCTGTGATTCCAGAGTTGCAATTCACGAAGCAATGGAACAGCAGACCATCTCGATTGCCAAAGCTGGCATTACAACAGTACTCAATTCAAGGACCTCGGTACTAGCAGCTGCCAATCCAATTGCAGGGCGCTACGATGATCTTAAGGTCAGTCAAAGTTTTTATTATTGACTTGTATTATTTTCATATTTTGAAAATGTATTAACAGTTCTAGCCTTATATGCAAGGCAATCAGTTTGACACATTTTCTATTGCTACTCCTCAGACTGCACAAGATAACATTGATCTGCAGACAACCATCCTTTCTAGATTTGATCTAATCTTTATTGTTAAAGATGTCAGAATGTATGATCAAGACAAGGTATGACGCATTATTCTTTGTCCAGCTCATTGATGTGCTTCAGAGACTAAATAAACTTCCAATTGCAGCGAATTGCAAGCCACATCATTAAGGTGCATGCCAGTGGTGCTGCTGCTTCATCCAAGAATACAGATGCTAGTGAAGGAGAGAATTGGCTAAAAAGGTGTGGTTGGCCTTCTATGTTCTGATATACATACTACACAGTTTTGATATGATGTTCTTGGATTGTAAATGCATAATCCTCACATGTGTAGGTACATTGAGTATTGCCGTGTTACTTGTAAACCACGACTCTCAGAAAAGGCAGCAGAGATGCTTCAGAACAAATATGTGGAGATTAGACAGGCACGTGCTAAAGATTTTTCACTTAGTCTAACTGTTATTAAGACTGTTCTACTTATTTATTTTTTTCATTGTGCAGAAAATGAGACAACAAGCTCATGAAACAGGGAGGGCTGCAGCTATACCCATCACTGTGCGGCAGCTTGAAGCCATTATACGTTTGAGTGAATCTCTTGCAAAGATGAGATTGTGAGAATATAGCATTACTATACATTTGACATTTCTTTTTGCGAGTAGCTCAACTAGCAGTATATTTATATCTTACATTTTTCACATATTGGCTTTTATTTCCAGTGGGTCATAACTTACATGTTTTATAATGTTCCTAATTGGCACTTTGAATAATTATCAGGACAAGTGTGGCTACACCAGAGCATGTTGAAGAGGCATTTAGGCTGTTCAATGTCTCCACTGTTGATGCCGCAAGATCTGGAATCAATGAGCATTTGAACCTATCACCAGATATTGCAAATGAGATCAAGGTTAATCTTCCCATCCAAAAGTGAACTGCCAACTTGTCAACTTTGTTTTCTGAATTTTGTTGCCCATTTTGTTCCAACAGCAAGCTGAGGCACAAATAAAGAGAAGGATGGGAATTGGAAGCCACATATCCGAGCGACGCCTGATCGATGAACTAAATAGGATGGGGATGAATGAATCCATTGTGAGGAACCTGTCATACTATTTGCTATTTAATTAATTGATTTAGTATCATTTTTCTTATGCTACCATTCGGCTGCTTCAGGTGCGAAGAGCCCTTCTGATCATGCACCAAAGGGATGAAGTGGAGTACAAGAGAGAGCGCCATGTCATTGTCCGGAAGGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005432