BGIOSGA005445

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Revision as of 02:22, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005445| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005445, complete gene.| tag = OsI_092...")
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Gene Name

BGIOSGA005445

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005445, complete gene.

LocusTag

OsI_09268

Ensembl Transcript ID

BGIOSGA005445-TA

Ensembl Protein ID

BGIOSGA005445-PA

Length

4983

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35890239..35895221

Sequence Coding Region

35894938..35895221,35894731..35894851,35894567..35894638,35894229..35894327,35894058..35894099
,35893631..35893711,35893473..35893523,35893302..35893383,35892804..35892898
,35892132..35892203,35891937..35892071,35891031..35891099,35890875..35890941
,35890239..35890393

Genome Context

<gbrowseImage1> name=IndicaChromosome02:35890239..35895221 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:35890239..35895221 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATAACCTGGCCACCACCACCTCCACCAGGCCCACCTCCTAAGAATTCCTCGAACTCTTTGCCAAGTAAGGGTAATGTTGTCAGTTCATCTCCTCCCCCACCTCCTACATTCTCATTTGGCGCAAAGGACCGTAGCACAGCCCGGTCCAGAAGTCCTAGAAGTTTGCGGCCCAACCAGTCATCTAAGAGGACACCATTGAAGCCGTTGCACTGGGTGAAAGTGTCAAGAGCTACACAGGGAAGCTTATGGGCTGAAACACAGAAGTCTGATGAAGCATCAAGAACCCCAGAGATAGATATTTCGGAACTTGAAAGTCTTTTCTCGGTAGCCATGCCAAACATGGAGGAGAAACGGGCACGCCAACGTCCTTCTGTTGCAGCGAAACAAGAAAAAGTTCTTTTGATTGACCTTCAGCGCTCAAAGAATTGTGAAATTATGCTGAGAAACATTAAGATGCCATTACCAGATCTGATGAACTCAGTGCTTGCACTTGACGATTCCATTGTTGATGGTGATCAAGTAGATTATCTAATAAAGTTCTGTCCAACTAAGGAAGAAATGGAACTACTCAAAGGGTTTACAGGCAACAAAGAGAACCTAGGGAAATGTGAACAGTTCTTCTTGGAAATGATGAAAGTCCCAAGAGTGGAGTCAAAACTGAGAATCTTATCCTTTAAGATTAAGTTTCTTACACAGGTTGCAGATCTGAAAAACAGCTTGAATACTATCAATTCTGTTGCTGAAGAGGTTAGGAACTCTGTTAAGCTTAAGCGAGTGATGCAAACAATTCTTTCGTTGGGAAATGCATTAAACCAAGGAACTGCAAGGGGGTCGGCTGTTGGATTTAGATTGGATAGCCTTCTTAAACTCATTGATATTCGGGCACGTAATAATAGGATGACTCTCATGCATTATTTATGCAAGGTTCTTTCTGACAAGCTTCCTGAAGTTCTTGATTTTAACAAGGACCTCACATATTTAGAACCTGCATCAAAGTGTGGTGGTGAATCACAGATTCAATTGAAAGAGTTGGCGGAAGAAATGCAAGCGATAACAAAGGGACTGGAAAAGGTTGAGCAGGAATTGACAACATCTGAAAAGGATGGTCCAGGGTCTGAGATATTTTACAAGAAATTGAAGGAATTTCTTGCTGATGCTCAAGCTGAAGGAAGATCGTTAGCTTTTCTTTACAGTACTGCGGGGAAAAGTGCAGATTCTCTAGCACATTATTTTGGTGAAGATCCAGTGCGGTGTCCATTTGAACAAGTTGTCTCTACTTTGCTAAGCTTCGTGAAAACGTTCGAGCGTGCCCATGCCGAGAACCTCAGACAGATGGAGCTGGAGAAGAAAAGGGCCCAGATGGAAGCAGAAAAGGAGAAAGTGAAAGCAGCAGCTCACAAGGAGGATTTGCTGGAGCCATGA</cdnaseq>

Protein Sequence

<aaseq>MITWPPPPPPGPPPKNSSNSLPSKGNVVSSSPPPPPTFSFGAKDRSTARSRSPRSLRPNQSSKRTPLKPLHWVKVSRATQGSLWAETQKSDEASRTPEIDISELESLFSVAMPNMEEKRARQRPSVAAKQEKVLLIDLQRSKNCEIMLRNIKMPLPDLMNSVLALDDSIVDGDQVDYLIKFCPTKEEMELLKGFTGNKENLGKCEQFFLEMMKVPRVESKLRILSFKIKFLTQVADLKNSLNTINSVAEEVRNSVKLKRVMQTILSLGNALNQGTARGSAVGFRLDSLLKLIDIRARNNRMTLMHYLCKVLSDKLPEVLDFNKDLTYLEPASKCGGESQIQLKELAEEMQAITKGLEKVEQELTTSEKDGPGSEIFYKKLKEFLADAQAEGRSLAFLYSTAGKSADSLAHYFGEDPVRCPFEQVVSTLLSFVKTFERAHAENLRQMELEKKRAQMEAEKEKVKAAAHKEDLLEP</aaseq>

Gene Sequence

<dnaseqindica>1..284#371..491#584..655#895..993#1123..1164#1511..1591#1699..1749#1839..1920#2324..2418#3019..3090#3151..3285#4123..4191#4281..4347#4829..4983#ATGATAACCTGGCCACCACCACCTCCACCAGGCCCACCTCCTAAGAATTCCTCGAACTCTTTGCCAAGTAAGGGTAATGTTGTCAGTTCATCTCCTCCCCCACCTCCTACATTCTCATTTGGCGCAAAGGACCGTAGCACAGCCCGGTCCAGAAGTCCTAGAAGTTTGCGGCCCAACCAGTCATCTAAGAGGACACCATTGAAGCCGTTGCACTGGGTGAAAGTGTCAAGAGCTACACAGGGAAGCTTATGGGCTGAAACACAGAAGTCTGATGAAGCATCAAGGTATTCCAAACATTTTATGCCATTATTTTCCAGGTAAATGCTAATGGTAGCACTATAACATGTTAGTCCATTTATGTCTTCACCAGAACCCCAGAGATAGATATTTCGGAACTTGAAAGTCTTTTCTCGGTAGCCATGCCAAACATGGAGGAGAAACGGGCACGCCAACGTCCTTCTGTTGCAGCGAAACAAGAAAAAGTTCTTTTGGTACTTATACTTCACATTCCTTACTGCAAATATTCACAAGCAGTGAGAAAATTCAAGTGAAAAGTAAATAAGATTAACCTTTTCTTCTGCAGATTGACCTTCAGCGCTCAAAGAATTGTGAAATTATGCTGAGAAACATTAAGATGCCATTACCAGATCTGATGGTAACGAACTAAACAATTTTGTTGAAGGGATATGGCTCTTGAAAAGTAAAAGTAATCTGGCGTATTTGATGCATACCCTTGCTGATAGACTATAATAGCTAATCTTACTAATGCCACTTCCTAAACCTGGTTGGGTTATATTAGTTACCTATTGTTGCAACTGTTACTGAGCATAAAGTATTTGGCAGCTGTACTGAACTAGTGGTTTCTGTTGATAATAGTGGTTCCTTTTTTTTCAGAACTCAGTGCTTGCACTTGACGATTCCATTGTTGATGGTGATCAAGTAGATTATCTAATAAAGTTCTGTCCAACTAAGGAAGAAATGGAACTACTCAAAGTATATATCTACTCAGCAGATTGCTCTTTGAAATATCATTGGACTCTTGAAATTCTTACTGCGTCTGTTCCAGTGGAATTTTTTCTGTATTCTGCTAATTGATTCAGGTTTTTCCTCCTACTTTTTCAGGGGTTTACAGGCAACAAAGAGAACCTAGGGAAATGTGAACAGGTCACTAATAATCTTTTCTACTTGATCTTTTGTTGGTGATGAGCTTTGTTTTTTTGGTAACTATGTAAATAATAATGAATTTCATAGTTCATCCCAAGATATACACAATCTTAGTGGGAGATCATACAGCCAACTATCTCACCCAGTCATGTTTGGATGTTTCTTGGAAGTTATGTAGTGGAGTAGCTAATAAGATGATCATTTTTTTCAGCATTTTCCCGGTGCCATGTTATGTATATATAGCTTGTTTATTGCTTAGCCTGTACCAGCAGTTATACTATTAATTTTTTGCTTAATCTCATGCATGAACACAAAGGCTTGATCTGACTTGCTTCTGTAATTGTAGTTCTTCTTGGAAATGATGAAAGTCCCAAGAGTGGAGTCAAAACTGAGAATCTTATCCTTTAAGATTAAGTTTCTTACACAGGTCAGCAGAATATTTGCATCATTTTTTCCCCAGTGAACTTGTGTAACTGTTCTGATAGATAAGTAGAGTTTAATTTTTTTGCCGAGTAATTCTGTGCATTCTTTCAGGTTGCAGATCTGAAAAACAGCTTGAATACTATCAATTCTGTTGCTGAAGAGGTACACTGTTATATAATATGACCTCAAGTCCTCAACCTTTTCCCGTTTGACTAGTTTAAACATGCTGTTATATAATGTTATTTGGACAGGTTAGGAACTCTGTTAAGCTTAAGCGAGTGATGCAAACAATTCTTTCGTTGGGAAATGCATTAAACCAAGGAACTGCAAGGGGTGAGTAATTAAGTATGGTCTAAGATTGATATGTTTACGATATGATTTTTGCAAATTGATCTTCCAACATGAAGAAATACAGTGCACATGGTTTCTCTTTTTTTAAAAAAAAAAAAATCTTGTTCTATTTTTTCCAATAAATCATTTTTTTCATATCATAGAAAATGTTGGTTAAAACAAAATTCGAGCATTTAACAATTGTCACGGGTGAAGATGTAGCTAGGATTTATGGACAGGAAGAAGACCTTACAACTGCAATTCCTGCGCTCTTATTTCAAAACAGCATGTTCAATTTCACCATAGCTATTATGTCCTGAACCATCATCTCTCTTAACCACATGAAATTGATGGCGAACTGTTGATTATATCCTTCATATTTTTCTCACAAACACCTGTTTTTCAGGGTCGGCTGTTGGATTTAGATTGGATAGCCTTCTTAAACTCATTGATATTCGGGCACGTAATAATAGGATGACTCTCATGCATTATTTATGCAAGGTATGGCATTTAATTTCAGTAATCCCATCGTTTTTTGTGTTTTGAAGTGTCACTGAACCACATAGTTATGAAAGCATTGCTCGTTTTGCGGGAATTTACTGGTGCATAGCAATAGAAGTTCCACATACTAAATTTCTTATGAGTTAGACCTAGAGAAGGGATCTATCAAGGGTATGTCTAAATAGTATCATTGTGATTGTATTATTGATGGTTGTTCATTACAGTAGGAAGAGAAAGATTATCTAAAACTAAAAGCTCCCTTTTTCCATTTAGAAACAGTACATTGACCAACTGCATACAGTGGTTTCTCATTAAAAATTTGCATTCAGCTGTGAGCAGGACAGCAGTGACTGTATTGCCCTTTTTTTTCATCTTCCCTTTATTCCCATGTTTCAAATATCATATCAGTCTTTCTCAAAAAAAGGGAACAAGAGCATATGACGAAAGTAGATATGAATCTGCGTCTGTAAGTTTGGACTGGTTGCTTTTATAACCAGTATATTTGCATTGATATTTTGTCATGAAGTTGATACTTTTGTGGCAAGCTCAGATAAGTATGCACTTTCATGAACTCTTTCTCAAAGTTTATTGCGCTCGCAGGTTCTTTCTGACAAGCTTCCTGAAGTTCTTGATTTTAACAAGGACCTCACATATTTAGAACCTGCATCAAAGGTAACTTACATATATTAATTAACGCTAGATCCACGTTGGCTTTGTTTTGCTTGCTTATAGTGTGGTGGTGAATCACAGATTCAATTGAAAGAGTTGGCGGAAGAAATGCAAGCGATAACAAAGGGACTGGAAAAGGTTGAGCAGGAATTGACAACATCTGAAAAGGATGGTCCAGGGTCTGAGATATTTTACAAGGTCGGTTGCCTGAGATTTTATTGTTAGTCATATGAGCAGAAATTTCTCATTTATTTTCGCTGATTACAATCGAGAAAATGGTGCATGGTATTTGGTTCTCCAACTTCCCCCATTGATTCTCTGTTGCCTCCTTGTGGATGTAGTTGTTGGAACTGGAAATTATAAATATAATTTCATGTTTCTCAAAGTATTCTTCTTATGTAAAACTCATCATCAAAGATTCCGAGTTACACTACAATAGGGATAGTGACAAAATGTGAAAAGTAAAAGGTGATCAGAGACCTTTGCCATACTAAAGGGAATGAACATGAATCAACAATTTAGTCCTTACTGCTCCATTTGTATTATTAGATTATGGAAACCATAACACTTGATTGCAGTTTTGCAGTTTTGTACTTCATCAGTACATAGGCTTTATAGATACTCCCTCCGTTCCAAAATATAAGTATTTCTAGGGTTCAAAATGTGTGCCTCAATATAAGCATTTTATGGGACACTGATTCCATGGAAATCCATACATTTTTAGCCAATCAGGTGCTTAGGAGACGAATCTAAGCGATTCAAAAATCAAAATTTGACCACTGAGGTGACTGAAAGGGAATCTTTTCCCTTAACCTTGGTATTTGCTAAAAAAACCTAGAAATGCTTATATTTTGGAATTGAGGGAGTATATTCTATTAATAGTTTGCAAATTGTCATAAAAGGATGGATAAGAACAAACATGACGACACCCATAACTGAAACAGTTAGTCATTTAGTTGACTATCATTGCACAATGTTTTGCTGTTAGTATATTATTAACTGTAATACTAATACTCAAAAGAGCTTTCGTTTCAGAAATTGAAGGAATTTCTTGCTGATGCTCAAGCTGAAGGAAGATCGTTAGCTTTTCTTTACAGTACTGCGGTATGCAAAGACTATAAATAGTTTCATTACCTTGCTGTATACGTCTTCTAACATGTATTTGTACTAAGTTTTAGTTATTTTATTTTCAGGGGAAAAGTGCAGATTCTCTAGCACATTATTTTGGTGAAGATCCAGTGCGGTGTCCATTTGAACAAGGTATTTTATTTTTATATATAAGGCTTAATTAATATTCCTAACTACTCTACAAAAATGTACAAAGCAAAGATAAGTGGGTCTGATACAAAAGGGAATGGGAAACGTGTATTTATATGCAAGGCATGTGACGAAAGGTGCTATGATAATTGAGTTAGTCATCATGTTTCAGACAGAGGGCACTGCATTCCTCTTTCCATGGTATGACCTGTCACAATTGGATAACTTAGGAGTAATTGAGTATTGCCATTTTTGGGGTTGTACAATCAAACTAAGAAGGGGCATACAATTCTGGGGGTCCCTGGTGGTTTTACCAGAATCATCCAAATTGCTGCTGTTCTTTGTGTGCTTTGTTCCTTAGTGAACTTGTATTGCCATGATAGATACTAGAATTGTTGCATCCACCAAATCTTCAGATTAATACCAGTTAGCTTTTGGATATCTGCAGCAGCTATATGATTTCCTGACCTTTTTATGTGGACAGTTGTCTCTACTTTGCTAAGCTTCGTGAAAACGTTCGAGCGTGCCCATGCCGAGAACCTCAGACAGATGGAGCTGGAGAAGAAAAGGGCCCAGATGGAAGCAGAAAAGGAGAAAGTGAAAGCAGCAGCTCACAAGGAGGATTTGCTGGAGCCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005445