BGIOSGA005457

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Revision as of 02:23, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005457| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005457, complete gene.| tag = OJ1249_...")
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Gene Name

BGIOSGA005457

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005457, complete gene.

LocusTag

OJ1249_F12.5

Ensembl Transcript ID

BGIOSGA005457-TA

Ensembl Protein ID

BGIOSGA005457-PA

Length

2781

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35730571..35733351

Sequence Coding Region

35733284..35733351,35733070..35733143,35732637..35732710,35732405..35732514,35732131..35732222
,35731892..35732004,35731381..35731500,35731155..35731300,35730969..35731079
,35730833..35730892,35730571..35730727

Genome Context

<gbrowseImage1> name=IndicaChromosome02:35730571..35733351 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:35730571..35733351 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGCAGCTCGTCGCCGCCGCCGCCCCCGCAGATTCGTTGCGCCTCCTTCAATCAGGACAACAGCTTGTTTTATGTCGGGACGAAGGATGGATTCAGAATTTTCGATGCCCATACAGGGAAGCTCCACTACCAGAAGAATATTGGTGGAATCGGCAATATGGAAATGTACTTTCGGACAAACATTCTTGCTATAGTCGGAACCGGTGAACAGCCTGTACTATCTCCTCGCTGCCTTCGCCTTATCGACACCGTAGCAGCTGTCACAAAGAAAGATCTGAACTTTAAGACTTCAGTTTTGGCTGTTCGATTAAGTAGAACGAGGCTTGTTGTTGTATTGCAGGACAGGACCTTTATTTATGATGTAAACAGCACTACTATATTGGAAGAAATTGAAACAGTTCCCAATACAAAAGGTCTTTGTGCATTCGCTCCTAATTCAGAAGCATGTTATTTGGCCATCCCAGCAAGCACATCCAAAGGATCTGCTTTAGTTTATAAGGCATCAGAACCTGAATTAATATGCCAGATAGATGCTCACGAGTCTCCCTTAGCTGCAATGGCATTTTCTTCTAATGGCACGTACCTGGCAACAGCTTCTGGGAAGGGTACTATTATTAGAGTATTTCTCGTTGCACAAGCAACCAAGTCACACAGTTTTCGGCGGGGAACATACCCATCAACAATATATTCACTCTCATTCGGACCATCGGATGATCTGCCCGATGTTCTTGTTGCCACAAGTTCATCAGGCTCGTTGCACATGTTTTTCCTCGATGCTGCCAGAAATCGAAGGAACCAAACGAGCAAATTGCTTGGTTCAATGATTCCTGGAGTAATAACTCGTGCTTTGGATCCAGCAAACCATCACATTATTCACAACGTCATCCCCGCAGGAATCAAGAGCTGTGTAGCCGTACATAAGGTCGAAAATTCACAAAATTCTTCTAAACTTCCTGCTTTAAGGACTGTTGTTTATATCATAACTCATGATGGATACTTCCGCGAGTACTCGATCAACACCACAAAGTCAAATGAATCTTCCTGGGTTTTGCAACGCGAGCTCAATCTACTGGATACCGGTTGTAGCACTCCCCAGCGGGAGGAACAACACAAGGACTGA</cdnaseq>

Protein Sequence

<aaseq>MASSSSPPPPPQIRCASFNQDNSLFYVGTKDGFRIFDAHTGKLHYQKNIGGIGNMEMYFRTNILAIVGTGEQPVLSPRCLRLIDTVAAVTKKDLNFKTSVLAVRLSRTRLVVVLQDRTFIYDVNSTTILEEIETVPNTKGLCAFAPNSEACYLAIPASTSKGSALVYKASEPELICQIDAHESPLAAMAFSSNGTYLATASGKGTIIRVFLVAQATKSHSFRRGTYPSTIYSLSFGPSDDLPDVLVATSSSGSLHMFFLDAARNRRNQTSKLLGSMIPGVITRALDPANHHIIHNVIPAGIKSCVAVHKVENSQNSSKLPALRTVVYIITHDGYFREYSINTTKSNESSWVLQRELNLLDTGCSTPQREEQHKD</aaseq>

Gene Sequence

<dnaseqindica>1..68#209..282#642..715#838..947#1130..1221#1348..1460#1852..1971#2052..2197#2273..2383#2460..2519#2625..2781#ATGGCGAGCAGCTCGTCGCCGCCGCCGCCCCCGCAGATTCGTTGCGCCTCCTTCAATCAGGACAACAGGTACGACCGAGCGAACGACAAGTAACTGTATTCGGGGGGAGTCGGCGATTCTGAATTTTGGGGGTGGGAAGGGATTTCTTGGGTCGGATCCGGCGACGAAGAACCCTAATTGTGATTGCGTGCCGGTTGATTTGTTTCAGCTTGTTTTATGTCGGGACGAAGGATGGATTCAGAATTTTCGATGCCCATACAGGGAAGCTCCACTACCAGAAGAGTGAGACTTCCTTCAATGCATCTTCCTTTTCTTTACCCATCCCTCTGTTCTTGTTGCTCTCCATTGCCTAGCGCGAATATCCAACAGTACAGCATGTAAAATTTGGCACAGATTGCTCGTAGATTGTGAAGTAGAAACAGTTAATTCCCAGTAGGATGTTAAGCTGAACAAGGTTACATTGTGCTGCCTGCGTTAGTCAGCTAGGTTAATAGTCATTAGTGTGCATTGATGTATGGTAGAACCAAATGAATTTTATTGCCGTTAGCATGGAAACTGGCTATTCTATCATGGAGGAGAGAGTTGTTCTGTAGTGCTTTTATAAGAAGCTATGGTGTTATAGCTATCTGCTCAATTTGCAGATATTGGTGGAATCGGCAATATGGAAATGTACTTTCGGACAAACATTCTTGCTATAGTCGGAACCGGTGAACAGGTACCTCGGCCATATTTTCCCTGTTTGCTTGAGTCGTTCCTGCTGTGTGATTGTCTGTCATACTATTGAATTTAATATAGACGAATTTGCTAGTTAACTACCGTTCAAATTTATCTCTGCAGCCTGTACTATCTCCTCGCTGCCTTCGCCTTATCGACACCGTAGCAGCTGTCACAAAGAAAGATCTGAACTTTAAGACTTCAGTTTTGGCTGTTCGATTAAGTAGAACGAGGTATGTCACCAGTATTTTATATCCTAGAAGGGACTACATTAGAAACATGTTAGTTTTTTTATGATATAAAGATATTTCTTGGTTAACATATTTGTGCAAAAATCATGCAATATATAATGATGGATCCCATATTATACTTGCTCGTTTTTTTTTCTGTAAAATAGTTGTCACATCATGTGCAGGCTTGTTGTTGTATTGCAGGACAGGACCTTTATTTATGATGTAAACAGCACTACTATATTGGAAGAAATTGAAACAGTTCCCAATACAAAAGGTGAGGATCCTACTGCTGTTTGTTCCTGGCATCAAGTTGAAGGAGCTAGAGAAAAAGATCATTAAGCATTCTTGAGAAGCTCTCTCACCATATTTGCTGTTAATATTGTTATTCTTTGTATATCAGGTCTTTGTGCATTCGCTCCTAATTCAGAAGCATGTTATTTGGCCATCCCAGCAAGCACATCCAAAGGATCTGCTTTAGTTTATAAGGCATCAGAACCTGAATTAATATGCCAGGTAATTTGAATTTGTTGTTTATTGGTTAATCTTATTGGCTGTTGTAGGCTATTATCCTTCCATGAGATTTTCTCACACATCCCCACGCATTAATGTTCTTCTGGTCCTGGATCTTTCTTGAAATTATTGCTTTACATGCCATTGCATTTCATTGATAATTTAGGATCTCTTACTGCCTTTTCAAATCAGAGGGAAGAAAAAAGAACAGTTATGCAAAATTAGCCGTGTAAGATATTTATGTTGGTATAATAAGCTGAAAATAACAAAATAAACCATTTTCCGAACTGCTTTCTTTCACTTTGTATTATTAATTATTAGCTTTGATAGCTTGTTTTGTTCTTTCTTTACTTATGTTATGTCTTTTCACTGTTTTTGTGTAATTGACCAACAGATAGATGCTCACGAGTCTCCCTTAGCTGCAATGGCATTTTCTTCTAATGGCACGTACCTGGCAACAGCTTCTGGGAAGGGTACTATTATTAGAGTATTTCTCGTTGCACAAGCAACCAAGGTGAATTCAACGTTATTTATTGTCTGCTCTTGCAACCAACTAGATTTTCCTAAACTCTTTTTACATACATACTTCAACAGTCACACAGTTTTCGGCGGGGAACATACCCATCAACAATATATTCACTCTCATTCGGACCATCGGATGATCTGCCCGATGTTCTTGTTGCCACAAGTTCATCAGGCTCGTTGCACATGTTTTTCCTCGATGCTGCCAGAAATCGAAGGTACATAGCCAGCTCAAATATTGATAATTCGTGGACGGTGTATGTAGGCATGATCTGATTTACTCCACTTTTCAGGAACCAAACGAGCAAATTGCTTGGTTCAATGATTCCTGGAGTAATAACTCGTGCTTTGGATCCAGCAAACCATCACATTATTCACAACGTCATCCCCGCAGGAATCAAGAGGTGTTGAGTTCATCTGATTTCCACTACTTTCTACCTTCCATTATTGTCATTCTAATCTAATCCTTTGGAATTTCAGCTGTGTAGCCGTACATAAGGTCGAAAATTCACAAAATTCTTCTAAACTTCCTGCTTTAAGGTAAGAAATGAAAACACCTTTTTTCTGCCCCTCATCTTTATTTAGCATATAGCTACTGTGGGTTAGTAAAATCTTACCCATTATTGTCTTTGCAAAAACTTGCAGGACTGTTGTTTATATCATAACTCATGATGGATACTTCCGCGAGTACTCGATCAACACCACAAAGTCAAATGAATCTTCCTGGGTTTTGCAACGCGAGCTCAATCTACTGGATACCGGTTGTAGCACTCCCCAGCGGGAGGAACAACACAAGGACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005457