Os12g0512100

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Revision as of 10:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0512100| Description = Sugar transporter family protein| Version = NM_001073404.1 GI:115488769 GeneID:4352329| Length = 3117 bp| Definitio...")
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Gene Name

Os12g0512100

Description

Sugar transporter family protein

Version

NM_001073404.1 GI:115488769 GeneID:4352329

Length

3117 bp

Definition

Oryza sativa Japonica Group Os12g0512100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19933132..19936248

Sequence Coding Region

19933345..19934385,19935460..19935806,19935905..19936058

Expression

GEO Profiles:Os12g0512100

Genome Context

<gbrowseImage1> name=NC_008405:19933132..19936248 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:19933132..19936248 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagaatgacgacgacgtcgagtcgccgctcctcgccgccgccgccgacgccgaccaccacgacgtcgacaacagccaccccgccgccggctcctccttcgccctcgcctgcgccgtcgccgcctccctcacctccatcatctacggctacaatcggggcgtgatgagcggggcgcagaagttcgtgcagctggacctgggcgtgagcgacgcggagatcgaggtgctcatcggggcgacgagcatctactccctcgtcggctcgctggcggcggggtgggcgtgcgaccgcgcggggcgccgccgcaccatcgcgctgtcggcggccatgttcctcgccggctccgccgccaccgccgcggcgagcggctacgccgcgctcatggccggccagctcgtcgccggcgtcgcctgcgggttcggcctcgtcgtggcgcccgtctacatcgccgagatcgcgccgccgtcgtcgcgcggcttcctcgcctccatccccgagatcgccggcaactccggcatcctgctgagctacatcgccgacttcgcgctcgccggcctccccatgtcgctcaactggcgcctcatgatcggcatcggcgccgtcccgccgctcttcctcgccgccgccgcgctgctcgccatgccggagacgccgcgctggctcgtcctgcacggccaccacgacgacgcgcgccaggtgctcgtccgcaccaccggcggcgacgccgccctcgccgagcgccgcctccaggagatcgtgtcgtccgtcaaggagagcgcgacgaagcagcagctgtcctccgccgccgccgccggcggcggcggtgcgtcaacgggcgtgtggcgcgacatcctggtccggccgacgccggcggtgcggcgcgtgctgttcgccatcctcggcctgcagttcttccagcaggcgtcgggcgtggcggcgatggtgctgtacgcgccgcgggtgttcaaccacgtcggcgtgacgtcggagcgcgcggtgctcggcgccaccgtcctcctcggcgccaccaagaccgcctccatcgtcgtgccgctcttcctcgccgaccgcctcggccgccgcccgatgctgctctccagcgcgggcggcatggccgtgtcgctcctcgtcctcggcttctccctgcgcgtgtcgtcgtcttccggctccggctccgagtggtgggcggcggcgacgagcgtggcggcggcggcggcgttcatggcgacgttctcgctggggttcgggccggtgatatggatgtacgggtcggagatcctgccgctgcggctgcgggcgcagggcacgggaatcgggacggcggcgaaccgggtgatgagcgcggcggtggggatgagcttcatctcgctgtacgaggcggcgggcatggccggcacgttctacctcttcgcggcgtgctccgcggcggcgtgggtgttcgtctacgcctgcctcccggagaccaaggggaggagcctcgaggagatggaggcgctcttcgacgccgcccacccatcctcgccgccgccggcgtcgtga</cdnaseq>

Protein Sequence

<aaseq>MKNDDDVESPLLAAAADADHHDVDNSHPAAGSSFALACAVAASL TSIIYGYNRGVMSGAQKFVQLDLGVSDAEIEVLIGATSIYSLVGSLAAGWACDRAGRR RTIALSAAMFLAGSAATAAASGYAALMAGQLVAGVACGFGLVVAPVYIAEIAPPSSRG FLASIPEIAGNSGILLSYIADFALAGLPMSLNWRLMIGIGAVPPLFLAAAALLAMPET PRWLVLHGHHDDARQVLVRTTGGDAALAERRLQEIVSSVKESATKQQLSSAAAAGGGG ASTGVWRDILVRPTPAVRRVLFAILGLQFFQQASGVAAMVLYAPRVFNHVGVTSERAV LGATVLLGATKTASIVVPLFLADRLGRRPMLLSSAGGMAVSLLVLGFSLRVSSSSGSG SEWWAAATSVAAAAAFMATFSLGFGPVIWMYGSEILPLRLRAQGTGIGTAANRVMSAA VGMSFISLYEAAGMAGTFYLFAACSAAAWVFVYACLPETKGRSLEEMEALFDAAHPSS PPPAS</aaseq>

Gene Sequence

<dnaseqindica>1864..2904#443..789#191..344#agaggtccacgtttcctcgccgcgccgcgccacgccacgccacgccgcgcgctctcctcgcctcgccctcgcgtgtcgcgcgctctcctcgcctcgccctcgcgtgtcgcgcgctcgcttcataagcaccaccaccccccagccgcgctcgccggcgcgcgcccacctagcttcaccaacccacccagccatgaagaatgacgacgacgtcgagtcgccgctcctcgccgccgccgccgacgccgaccaccacgacgtcgacaacagccaccccgccgccggctcctccttcgccctcgcctgcgccgtcgccgcctccctcacctccatcatctacggctacagtaatctacccaaatcccaaatcgatccgctcgccgccgccgcgccgccatggccgcttattgctaaggttttcctcttctttttggtacgcgcacagatcggggcgtgatgagcggggcgcagaagttcgtgcagctggacctgggcgtgagcgacgcggagatcgaggtgctcatcggggcgacgagcatctactccctcgtcggctcgctggcggcggggtgggcgtgcgaccgcgcggggcgccgccgcaccatcgcgctgtcggcggccatgttcctcgccggctccgccgccaccgccgcggcgagcggctacgccgcgctcatggccggccagctcgtcgccggcgtcgcctgcgggttcggcctcgtcgtggcgcccgtctacatcgccgagatcgcgccgccgtcgtcgcgcggcttcctcgcctccatccccgaggtgcgttgtggcacgtgtgttttttttttttttttgcatgttgctaactaattacttctttctccgcatgcctaatccctaattagggagtactaatcaatcttctaaaattaagttcaattaaacttcttctccacatgactaattgctcattaggaagtaaatatacttagtaatctctaattatcagatcaagttcagttgatacactaactattgtggtttcgatcgagagatcaagaaatacgtagggttaattacccgagaaagagaaagaggttaggtttagtgttattaatatgtgattagatagatacttagctgagccacgtcaagctgaggcatcctaatctaaaatggattaattaaaacgaaatcaaatcgatcttctctgcttaacaatatattctagtacgagatttgttgggacctgaggggcacatgcatgaacacgccggaaatttaatgctttttaatgagattttaccgtggcaattatgcatggttcaaaattaaattagattgtactggcataaagtgtaatttatctggctgtgaatgagtccactaaactgaatttaactttaattaagcatagaaatacgagttcaattcctctacgtattttgtcacgcatttgatacattatcctttccttattataatgtcaataaaatttggttggaaatttataaatgttgatttatacgtatcattttagacaatagtagtactcttctgtttcatattataactcatttcatctttatctttttcctagttaaattttattaagtttaatcaagtttataaaaaatttagcaacatctaaaatatcaacttatttttgttaaaatctaacattgaatatattaatatgtttgttttgtgttaaatatacaactatattcttttataaatttgatctaagttaacaaaatttaactaagaaaaagttcaaaacagttcaaatgacttataatataaaacgaatggagtaaaattttgcgaaatgggttgttttgagtgaaattgatgctgagctgagctttgtgttgatggctgccacgtcagatcgccggcaactccggcatcctgctgagctacatcgccgacttcgcgctcgccggcctccccatgtcgctcaactggcgcctcatgatcggcatcggcgccgtcccgccgctcttcctcgccgccgccgcgctgctcgccatgccggagacgccgcgctggctcgtcctgcacggccaccacgacgacgcgcgccaggtgctcgtccgcaccaccggcggcgacgccgccctcgccgagcgccgcctccaggagatcgtgtcgtccgtcaaggagagcgcgacgaagcagcagctgtcctccgccgccgccgccggcggcggcggtgcgtcaacgggcgtgtggcgcgacatcctggtccggccgacgccggcggtgcggcgcgtgctgttcgccatcctcggcctgcagttcttccagcaggcgtcgggcgtggcggcgatggtgctgtacgcgccgcgggtgttcaaccacgtcggcgtgacgtcggagcgcgcggtgctcggcgccaccgtcctcctcggcgccaccaagaccgcctccatcgtcgtgccgctcttcctcgccgaccgcctcggccgccgcccgatgctgctctccagcgcgggcggcatggccgtgtcgctcctcgtcctcggcttctccctgcgcgtgtcgtcgtcttccggctccggctccgagtggtgggcggcggcgacgagcgtggcggcggcggcggcgttcatggcgacgttctcgctggggttcgggccggtgatatggatgtacgggtcggagatcctgccgctgcggctgcgggcgcagggcacgggaatcgggacggcggcgaaccgggtgatgagcgcggcggtggggatgagcttcatctcgctgtacgaggcggcgggcatggccggcacgttctacctcttcgcggcgtgctccgcggcggcgtgggtgttcgtctacgcctgcctcccggagaccaaggggaggagcctcgaggagatggaggcgctcttcgacgccgcccacccatcctcgccgccgccggcgtcgtgatcgatcacgcgcgcgcgggaagacgaggttttgtgtggtcgtcgccctcctcgccggcgacggcgccgccggcgtcgtcgtgatcgggaaaaaggttgtaaaatgtgggatagggtgtggtaaattggtaattaattaaggaatgcagtaagcaggatgggtaaatgttaatttgttggtgtgtaatataatttttatggcaaggtcaccacc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0512100, RefSeq:Os12g0512100