BGIOSGA005462

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Revision as of 02:23, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005462| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005462, complete gene.| tag = OsI_092...")
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Gene Name

BGIOSGA005462

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005462, complete gene.

LocusTag

OsI_09228

Ensembl Transcript ID

BGIOSGA005462-TA

Ensembl Protein ID

BGIOSGA005462-PA

Length

4618

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35635423..35640040

Sequence Coding Region

35639982..35640040,35638929..35639427,35637849..35638061,35637413..35637699,35637052..35637163
,35636731..35636967,35635423..35636094

Genome Context

<gbrowseImage1> name=IndicaChromosome02:35635423..35640040 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:35635423..35640040 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTTGGGGCGGGGAAGGTGGACGATGAGATGGCGCTCAAGAGGCAGAGAACCGTGAGGTTCTATGATGAGAAGGCAAAACCAACTATACCAACTCACCAGAAACAGGCAGGGTTCGCTGCTAGTAAACTTGGTGTGGCAAGCTCAGGAAAGAACAAAATTTTTGTGCCAGGAGAAGAGCTGTGGTACAAAAGGATTTTGGACCCATCAAGTGACTTCATCTTGACATGGAACCACATTTTCCTTTTTTCGTGCTTCGTTGCTCTATTTATAGACCCTCTGTACTTCTACGTGCCAAAAATCTCCTATGGCACCCCAAATTCGTGTATTGGGACAGACAGGCATTTAGCCATCACTGTTACATTCTTCCGATCAATCTCTGATTTACTATATTTCACTCACATTATAATAAAGTTTAGAACGGCATATATTAATCCGAGCTCAACCATGAGGGTATTTGGAAGAGGAGACCTTATCACGGATCCAAAGGAAATTGCGTGGCAATATTTGAGATCTGACTTCGTAGTCGATGCAGTGGCTGCATTGCCTTTACCACAGATCTTAATCTGGTTTGTGATACCAGCTATTAAGTATTCCACTGATGAGCATAACAACAATATTCTGGTGCTGATAGTTCTTGCTCAGTATTTTCCAAGACTATACCTCATATTCCCCTTGACTTATGAAATTGTCAAAACTACTGGAGTTGTCGCAAAGACTGCTTGGCAAGGGGCTGCATACAATATGTTGCTTTACATGATAGCCAGTCATGTACTAGGTGCTCTATGGTATTTGCTATCTGTCGATCGCCAAACTGCCTGCTGGAAGAGCAATTGCAAGAATGAAACTGGCTGTGATATTAAATTTCTAGATTGTGATGTGATACCAAATCAAAACTGGGCAAGCAAAACTGCTATCTTCAATACCTGTGACGCAACTAACACTTCAATCAGTTTTGATTATGGCATGTTTCAGCCTGCATTGTTTAATCAAGCCCCAGGGCAACGTTTCTTGATGAAGTATTTCTATTCCCTTTGGTGGGGTTTGCAGAATCTGAGTTGCTATGGCCAGACTATTACTGTGAGTACCTATATTGGTGAGACTCTATACTGTATATTCTTGGCAGTACTTGGTCTCGTCTTGTTTGCACATTTGATTGGAAATGTACAGACCTACTTGCAATCTATCACTGTGAGGGTTGAGGAATGGAGATTAAAACAAAGAGATACAGAGGAGTGGATGAGGCATCGTCAACTCCCACATGAACTACGAGAAAGGGTGAGACGGTTTATCCAGTACAAGTGGCTCGCAACTCGAGGAGTGAATGAAGAATCAATATTACAGGCTCTTCCTGCAGATCTTCGTCGTGACATTAAACGTCACCTTTGCTTGGGTCTTGTTCGCCGGGTTCCTTTCTTCTCCCAGATGGACAATCAACTTTTGGACGCCATCTGTGAGCGTCTTGTATCATCGTTGTGCACACAGGGCACATACATTGTCCGTGAGGGTGATCCAGTGACCGAGATGCTCTTCATCATTCGTGGGAAACTCGAAAGCTCGACAACAAATGGTGGCCGCACTGGCTTCTTCAATTCAACTACCCTGAAATCCGGTGATTTCTGCGGCGAGGAACTGCTTGGGTGGGCTCTTGTCCCCAAACCTACTGTTAATTTGCCGTCATCCACTCGGACAGTGAAGGCACTCATAGAAGTTGAGGCATTCGCACTCCAAGCTGAGGATCTCAAGTTTGTTGCAAACCAATTCAGGCGTCTGCACAGCAAAAGATTGCAACACACTTTCCGGTACTACTCGCACCACTGGAGAACTTGGGCCTCATGCTTCATCCAAGCTGCTTGGCGGCGATACAAGAGGAGGAAGATGGCAAGGGACCTGAGCATGAGGGAGTCATTCTGCTCCATGAGATCAGATGACTCAAATGGTGAAGATGACTCGCCACCTAAGCAGAATCTCTCTATGAAGATCATGAGTGGGAGTAGGAAAGGACCTCAGAACATGAAAGAGTTGCCTAAGCTAAGAAAGCCGGATGAGCCAGATTTTTCAGCTGAACCCTGTGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MFGAGKVDDEMALKRQRTVRFYDEKAKPTIPTHQKQAGFAASKLGVASSGKNKIFVPGEELWYKRILDPSSDFILTWNHIFLFSCFVALFIDPLYFYVPKISYGTPNSCIGTDRHLAITVTFFRSISDLLYFTHIIIKFRTAYINPSSTMRVFGRGDLITDPKEIAWQYLRSDFVVDAVAALPLPQILIWFVIPAIKYSTDEHNNNILVLIVLAQYFPRLYLIFPLTYEIVKTTGVVAKTAWQGAAYNMLLYMIASHVLGALWYLLSVDRQTACWKSNCKNETGCDIKFLDCDVIPNQNWASKTAIFNTCDATNTSISFDYGMFQPALFNQAPGQRFLMKYFYSLWWGLQNLSCYGQTITVSTYIGETLYCIFLAVLGLVLFAHLIGNVQTYLQSITVRVEEWRLKQRDTEEWMRHRQLPHELRERVRRFIQYKWLATRGVNEESILQALPADLRRDIKRHLCLGLVRRVPFFSQMDNQLLDAICERLVSSLCTQGTYIVREGDPVTEMLFIIRGKLESSTTNGGRTGFFNSTTLKSGDFCGEELLGWALVPKPTVNLPSSTRTVKALIEVEAFALQAEDLKFVANQFRRLHSKRLQHTFRYYSHHWRTWASCFIQAAWRRYKRRKMARDLSMRESFCSMRSDDSNGEDDSPPKQNLSMKIMSGSRKGPQNMKELPKLRKPDEPDFSAEPCE</aaseq>

Gene Sequence

<dnaseqindica>1..59#614..1112#1980..2192#2342..2628#2878..2989#3074..3310#3947..4618#ATGTTTGGGGCGGGGAAGGTGGACGATGAGATGGCGCTCAAGAGGCAGAGAACCGTGAGGTGAGCCTGCACGAGCAAAGCAAAAGCTCTTCTTTGGTCTAGTTTTAGCTTTTCAACTCTTAGAGATCCAACAGGCTCTGCGACCTGCGAGTGATTTGGCATTTGCTGTGAGCTTTTTCTTGTTGTTCTAGGAGGAAGGACGCTTTAGCCTGGATTGTGCCAGCTTTCTAATTTCCTGTTACTCTGCAAACAATTTATGTATTTGACCTGTTTTTTAGAGCATAGACTCCTTTTAAGAACCCAAATTAATCCATTCGATTTATTCTATAGCATGGTATGATGAAGGTTTTCATCCCTTTTAGTTGATCTGGCCAGGAAAGATTAACCTTTCGTGGATAAGAAATATAGGGCTTCAACCAAAATTGATATTAGAATTAAATTGTGTTAATGTACAAAAACTGTTCTAACTGTCAGTTCTTTATGTGATTTAGTTTACAATGGGAGGTTCTATTTCATTCCCAGCATTATTTTTCTTATTTTCACTGTTTTGGATGGACATACGAAAATATTCATGATGTAGAGTTCAAACATTTATGTGAGGCTGTAATTCACAGGTTCTATGATGAGAAGGCAAAACCAACTATACCAACTCACCAGAAACAGGCAGGGTTCGCTGCTAGTAAACTTGGTGTGGCAAGCTCAGGAAAGAACAAAATTTTTGTGCCAGGAGAAGAGCTGTGGTACAAAAGGATTTTGGACCCATCAAGTGACTTCATCTTGACATGGAACCACATTTTCCTTTTTTCGTGCTTCGTTGCTCTATTTATAGACCCTCTGTACTTCTACGTGCCAAAAATCTCCTATGGCACCCCAAATTCGTGTATTGGGACAGACAGGCATTTAGCCATCACTGTTACATTCTTCCGATCAATCTCTGATTTACTATATTTCACTCACATTATAATAAAGTTTAGAACGGCATATATTAATCCGAGCTCAACCATGAGGGTATTTGGAAGAGGAGACCTTATCACGGATCCAAAGGAAATTGCGTGGCAATATTTGAGATCTGACTTCGTAGTCGATGCAGTGGCTGCATTGCCTTTACCACAGGTAACTTGGCGCTCTTCCTTTTATTCTTGTCAACTGGAGTATAACCAGTATTAATGATCATTATTGTTAGGTCGTTTTCATAACTGAGTATATTTGTTAGCTCTGATGTTGTCTTATGTTCATTTATCTGCATGCGGACATAAATATGCTACTGTGCTAATATCAATCGTGAAGTTCTATTGTGGATCACCTCAATTAAGTTTCTTTACAGCAGATGCTACTATAGTATCTTGTGGATAAATAATGATTTGTAACTGTGTTAGTGCTGCCCAGACCACACTAAGGACAAAATAATTTTCCCCTCGCTTAATACAAAAGATACGCATGTTCTGCGTATTCTCAAAAAAAAAAAATGTGTCACTTGCTCAATCATCCTGTCTCTAAGTCAGCATGAAAATCCTAGGGAATCATCATGTTCAATCTTGGCAAATATTCTTCATAGTTTAAGAGCCAATCACTAAACTGAAACATTTTCATATGATGCATTATGAATTTAATAACTATTATTTTACCATCAGTGCCGACCACATGTATTGTCTCTTGATTTTTCTTGTGAATTCCTGTAAGCTAAAATTGAACCTCATATTAATGTTCCACTGGATAAGTTTACTACAATGGGCTCCAAAATGCAGCAACCTGCCATAGCATCTCCAGTTTGTTTGAGCTGATTTTCAATGGTTATAATCTTACTCATCGGGATTTCTAGGTTCTCTATGCTTCATAGGGCAATTTTGTACATCGTCAAACCTAAAAGCACTAAATAACTGAATTTTATTTGTGCAGCTGTTTATATTGCTCTTTCCTTCAAATGGAGGAATCTTCGATTTTGACTTTGCCTGCTGCTTATGTATCTTTACATTTATGCAGATCTTAATCTGGTTTGTGATACCAGCTATTAAGTATTCCACTGATGAGCATAACAACAATATTCTGGTGCTGATAGTTCTTGCTCAGTATTTTCCAAGACTATACCTCATATTCCCCTTGACTTATGAAATTGTCAAAACTACTGGAGTTGTCGCAAAGACTGCTTGGCAAGGGGCTGCATACAATATGTTGCTTTACATGATAGCCAGTCATGTATGGTATTCGTAAGCGTTTACATGAAATGTTTTCTACATCTCAAATATTGGTGTTCAGCAAATGTCGAATTAGATGTATTTGCAAGTCTTTAACTCCATAGCTATAATGTCTCCAAATTTTCACGATCTCCATTCATCTTCTTTCAGGTACTAGGTGCTCTATGGTATTTGCTATCTGTCGATCGCCAAACTGCCTGCTGGAAGAGCAATTGCAAGAATGAAACTGGCTGTGATATTAAATTTCTAGATTGTGATGTGATACCAAATCAAAACTGGGCAAGCAAAACTGCTATCTTCAATACCTGTGACGCAACTAACACTTCAATCAGTTTTGATTATGGCATGTTTCAGCCTGCATTGTTTAATCAAGCCCCAGGGCAACGTTTCTTGATGAAGTATTTCTATTCCCTTTGGTGGGGTTTGCAGAATCTGAGGTATTTCCTTGTCAAAACATCTTCGTGTCAAACTACAGCGCTATAAGAAGGAACTTAGTTTACAGTTTCCTTGTGAAATGTGTGTGTTCAGAAATTTCATGGGAATCACGGAGATTTTTGTGTCAAGCAAAGCAGTAAATTAAATATGGAAGTTTAGCCTAGTTCTTTTAATGGGATCATTACTTTACCAATTTTCAAGATCTATATTCATTTTCTAACGAGCTATATCCTCCTCTTCCTTTGCAACAGTTGCTATGGCCAGACTATTACTGTGAGTACCTATATTGGTGAGACTCTATACTGTATATTCTTGGCAGTACTTGGTCTCGTCTTGTTTGCACATTTGATTGGAAATGTACAGGTAATTTTTAAATGTTTAGTGATCATGTCTACACTACGATTGATTCTTTTGGCACTTTTTTATACACTGCTACTATTTTTCCAGACCTACTTGCAATCTATCACTGTGAGGGTTGAGGAATGGAGATTAAAACAAAGAGATACAGAGGAGTGGATGAGGCATCGTCAACTCCCACATGAACTACGAGAAAGGGTGAGACGGTTTATCCAGTACAAGTGGCTCGCAACTCGAGGAGTGAATGAAGAATCAATATTACAGGCTCTTCCTGCAGATCTTCGTCGTGACATTAAACGTCACCTTTGCTTGGGTCTTGTTCGCCGGGTAAATACTTTTGCATGCTTTTATAAAATACACCCAAGTAAATATTTGAAACTGTTGTGCGATCTTTTGATGTTTTTATTTTAAGCAATGAATGGTACTAGAAAGTTATTGTATATACTGGTCCTCTTCTCTTTTAAAAGATTATTAGAGTATATAGTTAGTTTTAGTGCTGTTTTGGTCTCAGTATATACCTGGAGTTTCTCATGTACTCACTAAATTTGCCCCTTGACCTACCTCATCAATGGAATATTTACTGGTTGCAATTACTTGATTCCTTCATTTATATTAGAATTGATCTTAGCATCATATTTGGCAATGTCACAATGAACTAGAAGTGATTGGATTCTTATATAGCAGCAGTAACTATTTGATCCTAGTTAAGCTAGTGGTGCCGGGTTTTGACAATAGATGGCCTTGATCCTAATTAAGTGTAGAAATAGGCAGTCTGAGATTGTTAGTTTGCATAGTTACCGCAGGGTCCAAATATTCTGGAGATTCCAAACAACTATTTTGAAACTGTCCAAATATACACTTCTTTTTAAAAAAAAAATGCATTTCTTGGGCAATTTACACTACAGGTTTGCCTTATACTTGACCGGTGTGCTAATTTTGTCTTTACCTACCACAATATTTCAGGTTCCTTTCTTCTCCCAGATGGACAATCAACTTTTGGACGCCATCTGTGAGCGTCTTGTATCATCGTTGTGCACACAGGGCACATACATTGTCCGTGAGGGTGATCCAGTGACCGAGATGCTCTTCATCATTCGTGGGAAACTCGAAAGCTCGACAACAAATGGTGGCCGCACTGGCTTCTTCAATTCAACTACCCTGAAATCCGGTGATTTCTGCGGCGAGGAACTGCTTGGGTGGGCTCTTGTCCCCAAACCTACTGTTAATTTGCCGTCATCCACTCGGACAGTGAAGGCACTCATAGAAGTTGAGGCATTCGCACTCCAAGCTGAGGATCTCAAGTTTGTTGCAAACCAATTCAGGCGTCTGCACAGCAAAAGATTGCAACACACTTTCCGGTACTACTCGCACCACTGGAGAACTTGGGCCTCATGCTTCATCCAAGCTGCTTGGCGGCGATACAAGAGGAGGAAGATGGCAAGGGACCTGAGCATGAGGGAGTCATTCTGCTCCATGAGATCAGATGACTCAAATGGTGAAGATGACTCGCCACCTAAGCAGAATCTCTCTATGAAGATCATGAGTGGGAGTAGGAAAGGACCTCAGAACATGAAAGAGTTGCCTAAGCTAAGAAAGCCGGATGAGCCAGATTTTTCAGCTGAACCCTGTGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005462