BGIOSGA005479

From RiceWiki
Revision as of 02:23, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005479| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005479, complete gene.| tag = OsI_091...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA005479

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005479, complete gene.

LocusTag

OsI_09190

Ensembl Transcript ID

BGIOSGA005479-TA

Ensembl Protein ID

BGIOSGA005479-PA

Length

1859

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35345009..35346867

Sequence Coding Region

35345946..35346867,35345435..35345520,35345009..35345383

Genome Context

<gbrowseImage1> name=IndicaChromosome02:35345009..35346867 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:35345009..35346867 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAAACGCTTGGGAGGAGGAGAGTGGCGGCCGTTGCATGGTGCAATGCCATTGCAATGGCGCTAGCTCTAGCGACACCGGTGGCTGTCGCTGCCAACCACGGCGACACGGCGGCGAAGGACAATGTGGCCGTCGTCCCGAGGATTGCCGCACCGGCAGCGGCGGCGCCGTCGGGTGTGAACGTCACGGCCATCTGCATGGCGACGCCGTACCCGAGCGCGTGCGAGACGGCGCTCTCGTCGGCGGCGGCGCGGGGCGCGGGCAGTGACCCGTTCGCGGCGTCGGTGCAGTTCGCGATGACCCGCGCCGAGTCGGCGCGCGCGCTGGCGCGCAACCTGTCGGCGTCGTCGAGGCCACGCGTGGCGCCGAACGGCATGGACGACTGCGCCGCGCTGACGAACCAGGGCACGTGCGGCGACAGCCTCGCCGCCGTTCCCGACCCCGCGGCGCGCTCCGCCGTGCGCGCCCGAGTCGCCGCGCTCGAGCAGTTCATCGGCACGGCGCTGGCTCTCCACGCCAAGCTCAATGGCGGCAGCGGGAGCTCCTCGCCGGCGCCGCCGAACCGTGCCGCGTTCCCATCCTGGGTCACCATGCACGACAGGCACCTCATCTCATCCCCGGCGAGCACCATCGCGCCGGACGCCGTGGTGGCCCTCGACGGCAGCGGGATGCACACGAGCATCAGCGACGCGATCGCCGCCGTGACCGCGCCGCCGCCGGCGCACCACCCCACGTCGAGCGGCGGCGGCGCAGGGAGCCGAAAGGTGATCTACGTGAAGGCCGGGAGGTACGAGGAGAGCGTGAGCATCACGAGCAAGCAGAAGAACGTGATGCTGCTCGGCGACGGCAAGGGGAAGACGGTCATCTCCGGCCACCAGAGCGTCGCCGGCGGCTACACCACCTACGCCTCCGCCACCGTCGCTGCAATGGGGTCGGGGTTTATAGCCAAGGGCCTGAGGATCGTGAACAGTGCCGGGCCAGGGAAGGGCCAGGCGGTGGCGCTGCGCGACACGCTCTACGTGCACTCCAACCGGCAGTTCTACGCCGCCGACGACATCTCCGGCACGGTGGACTTCATCTTCGGCAACGCCGCGGCGGTCATCCAGGGCTGCGAGATCCGGGCCCGGCGGCCCGGCCCAGGCCAGGAGGACACCGTCACGGCCCAGGGCCGTACTTACCATCTTGGCAGGTGCTGCAGGTTGGGAGAGGTGAGCATTGCTGCAGCTGCAGCTGTGCACTGGAGCTCTGATGAACTTGGCCATGGTTGCCTTCCTTGTGCCAAATCTTGGGGTGGCCATGGAGGAAGAAGGGTGATGGCAAGAGCTCATTGCCGCCATTTGGCTCATGGCCTTGCTAGTTTGGGAAGAAGGGTGGTGAACTAG</cdnaseq>

Protein Sequence

<aaseq>METLGRRRVAAVAWCNAIAMALALATPVAVAANHGDTAAKDNVAVVPRIAAPAAAAPSGVNVTAICMATPYPSACETALSSAAARGAGSDPFAASVQFAMTRAESARALARNLSASSRPRVAPNGMDDCAALTNQGTCGDSLAAVPDPAARSAVRARVAALEQFIGTALALHAKLNGGSGSSSPAPPNRAAFPSWVTMHDRHLISSPASTIAPDAVVALDGSGMHTSISDAIAAVTAPPPAHHPTSSGGGAGSRKVIYVKAGRYEESVSITSKQKNVMLLGDGKGKTVISGHQSVAGGYTTYASATVAAMGSGFIAKGLRIVNSAGPGKGQAVALRDTLYVHSNRQFYAADDISGTVDFIFGNAAAVIQGCEIRARRPGPGQEDTVTAQGRTYHLGRCCRLGEVSIAAAAAVHWSSDELGHGCLPCAKSWGGHGGRRVMARAHCRHLAHGLASLGRRVVN</aaseq>

Gene Sequence

<dnaseqindica>1..922#1348..1433#1485..1859#ATGGAAACGCTTGGGAGGAGGAGAGTGGCGGCCGTTGCATGGTGCAATGCCATTGCAATGGCGCTAGCTCTAGCGACACCGGTGGCTGTCGCTGCCAACCACGGCGACACGGCGGCGAAGGACAATGTGGCCGTCGTCCCGAGGATTGCCGCACCGGCAGCGGCGGCGCCGTCGGGTGTGAACGTCACGGCCATCTGCATGGCGACGCCGTACCCGAGCGCGTGCGAGACGGCGCTCTCGTCGGCGGCGGCGCGGGGCGCGGGCAGTGACCCGTTCGCGGCGTCGGTGCAGTTCGCGATGACCCGCGCCGAGTCGGCGCGCGCGCTGGCGCGCAACCTGTCGGCGTCGTCGAGGCCACGCGTGGCGCCGAACGGCATGGACGACTGCGCCGCGCTGACGAACCAGGGCACGTGCGGCGACAGCCTCGCCGCCGTTCCCGACCCCGCGGCGCGCTCCGCCGTGCGCGCCCGAGTCGCCGCGCTCGAGCAGTTCATCGGCACGGCGCTGGCTCTCCACGCCAAGCTCAATGGCGGCAGCGGGAGCTCCTCGCCGGCGCCGCCGAACCGTGCCGCGTTCCCATCCTGGGTCACCATGCACGACAGGCACCTCATCTCATCCCCGGCGAGCACCATCGCGCCGGACGCCGTGGTGGCCCTCGACGGCAGCGGGATGCACACGAGCATCAGCGACGCGATCGCCGCCGTGACCGCGCCGCCGCCGGCGCACCACCCCACGTCGAGCGGCGGCGGCGCAGGGAGCCGAAAGGTGATCTACGTGAAGGCCGGGAGGTACGAGGAGAGCGTGAGCATCACGAGCAAGCAGAAGAACGTGATGCTGCTCGGCGACGGCAAGGGGAAGACGGTCATCTCCGGCCACCAGAGCGTCGCCGGCGGCTACACCACCTACGCCTCCGCCACCGTCGGTGCGTACCCTTCCCACTACTCACGTCGACACGACGCGCCACCATGGACGACATGGATCGTCGTACGTACGTGCGTGGTGTGTCCAGATATCTTCCATTCCATGCAGAGATGCCCATGCATGACAGTTAATAGTTCGATCGATCTAGTCGTTAGATGCGCACACTTTTTATAGCCTTTAATTATCACCAATCTCGTCGAAATTAATCCTCAGCCGTCCAAATGCTAACGATAGCGATGTTGCACTTGCCAATTGCCATCACCCTTTTTCTTTCTAGCTTTCTGTTTTTTTTTTTTGCCGGTTTGTGCTGTACACTGCACTCCCATGATCAATTGCACAAGCAGAAAATTCTCATTTTCTACTAGTAGTAGTAGAAATGGATATAATCAATAATAAATAATGGCGAATTGATGATTATTCGTGCAGCTGCAATGGGGTCGGGGTTTATAGCCAAGGGCCTGAGGATCGTGAACAGTGCCGGGCCAGGGAAGGGCCAGGCGGTGGCGCTGCGCGTCGGCGGCGACCTCTCCGTCGTGTACAATTGCGGCATCGACGCGTACTAGGACACGCTCTACGTGCACTCCAACCGGCAGTTCTACGCCGCCGACGACATCTCCGGCACGGTGGACTTCATCTTCGGCAACGCCGCGGCGGTCATCCAGGGCTGCGAGATCCGGGCCCGGCGGCCCGGCCCAGGCCAGGAGGACACCGTCACGGCCCAGGGCCGTACTTACCATCTTGGCAGGTGCTGCAGGTTGGGAGAGGTGAGCATTGCTGCAGCTGCAGCTGTGCACTGGAGCTCTGATGAACTTGGCCATGGTTGCCTTCCTTGTGCCAAATCTTGGGGTGGCCATGGAGGAAGAAGGGTGATGGCAAGAGCTCATTGCCGCCATTTGGCTCATGGCCTTGCTAGTTTGGGAAGAAGGGTGGTGAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005479