BGIOSGA005481

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Revision as of 02:23, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA005481| Description = DnaJ protein| Definition = Oryza sativa Indica Group BGIOSGA005481, complete gene.| tag = OJ1311_D08.2| tid = BGIOSG...")
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Gene Name

BGIOSGA005481

Description

DnaJ protein

Definition

Oryza sativa Indica Group BGIOSGA005481, complete gene.

LocusTag

OJ1311_D08.2

Ensembl Transcript ID

BGIOSGA005481-TA

Ensembl Protein ID

BGIOSGA005481-PA

Length

5088

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35296470..35301557

Sequence Coding Region

35301420..35301557,35299547..35299640,35299304..35299377,35299167..35299229,35298073..35298372
,35296470..35296619

Genome Context

<gbrowseImage1> name=IndicaChromosome02:35296470..35301557 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:35296470..35301557 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGACGGGGGAGAGAAGTGCCGGGACGCGGCCGGCGAGGGCGGCGGCGGCGGCGGCGACCTGTACGCCGTGCTCGGGCTCAAGAAGGAGTGCTCCGACGCCGACCTCAAGCTCGCGTACCGGAAGCTCGCCATGAGATGGCATCCGGACAAATGCTCATCCTCCAGCAGTGCAAAGCACATGGAGGAAGCCAAGGAGAAGTTCCAGGAGATCCAGGGCGCCTATTCCGTCCTCTCAGACTCAAACAAGCGGTTCCTCTACGACGTGGGGGTATATGATGATGACAACAATGACGATGACAACCTGCAGGGGATGGGGGACTTCATTGGTGAGATGGCCCAGATGATGAGCCAGGCACGGCCAACGAGGCAGGAGAGCTTTGAAGAACTGCAGCAGCTATTCGTAGACATGTTCCAAGCTGATCTTGATTCGGGTTTCTGCAATGGACCCTCAAAGTGCTACCATACCCAGGCCCAAAGCCAGACTCGAACATCCTCAACCTCCCCTTCGACGTCACCGTCTCCACCGCCTCCAGTAGCTACTGAGGCAGAATCGCCATCATGTAATGGTATTAATAAGCGTGGTTCATCAGCAATGGACTCTGGGAAGCCTCCAAGAGCCAGCGAAGTCAGTGCTGGACAGAGTCAATCAGGGTTTTGTTTCGGGCAGAAGAGTGATGCTAAACAAGCGGCGAAGACGCGAAGCGGGAACACGGCCAGCCGGAGGAGGAACGGCCGGAAGCAGAAGGTGTCGTCGAAGCACGACGTCTCGTCTGAGGACGAGATGCCAGGTTCGCAGTGGCACGGCGTGGCCTGA</cdnaseq>

Protein Sequence

<aaseq>MADGGEKCRDAAGEGGGGGGDLYAVLGLKKECSDADLKLAYRKLAMRWHPDKCSSSSSAKHMEEAKEKFQEIQGAYSVLSDSNKRFLYDVGVYDDDNNDDDNLQGMGDFIGEMAQMMSQARPTRQESFEELQQLFVDMFQADLDSGFCNGPSKCYHTQAQSQTRTSSTSPSTSPSPPPPVATEAESPSCNGINKRGSSAMDSGKPPRASEVSAGQSQSGFCFGQKSDAKQAAKTRSGNTASRRRNGRKQKVSSKHDVSSEDEMPGSQWHGVA</aaseq>

Gene Sequence

<dnaseqindica>1..138#1918..2011#2181..2254#2329..2391#3186..3485#4939..5088#ATGGCCGACGGGGGAGAGAAGTGCCGGGACGCGGCCGGCGAGGGCGGCGGCGGCGGCGGCGACCTGTACGCCGTGCTCGGGCTCAAGAAGGAGTGCTCCGACGCCGACCTCAAGCTCGCGTACCGGAAGCTCGCCATGGTGAGCAATTGAGCTCGACGGCTTCATGCAAATGTTCTTTGTTTTTGTTCTTGTTCATGTTGTTGTCGTCGCTCCGCCGCGTTCTTGATTGGTAACTGGATTACGGCCATGGATTCGCCTTGTTGCTGTAACTGCTTCATAGGTAGGGAAAGAGCGTGCCGTGGTAGGCGATTTCGAGTTTGGAGAGGTGTAGATGATGGCGCCAAGTTCTTTTTTTTTTTCGCCGGGACGGCGAAGAATGCCGAAAAGGGGAAAACTGTACAAATGCAGTGCGTCAGAGCACCGCCTTTACAACAAAAAGCAAATTACAAAGTCTGTGATCTCTCTAAAGCTGGCACTGCAGCAACATTCAACGAGGTAACTAGCCCTGCTGATTTCCAAGTTTCCCATTCCTCACACATGGTCGCACACAGCTGCGTGACCGATGAGGCCGTTCCCTCGAAAACCCGTGCGTTGCGCTCTTTCCAAATCAATCATGTAACGAGGATGACCCCGGCATCGAACGTCTTGCGATCGATCTTCGCAACAGTTTGCCGGGCAGCGAGCCACCAACCGGCAAAGTCTGAGGACGGCGGCGAGCAGGAGAGGCTCAAACGAGCCTGAACCTTCACCCAAACTTGCTGCGAGAAGGTGCAGGCTTGGAAGATGTGTTGGCAGGACTCTCCATCCTTAGAACAAAGGTGACAAATTGGTGCGTGCTTCCAACCTCGGCGCTGCAGGTTATCAGCTGTTAAACAGGCATTGCGGACCGCAAGGAACATGAAGAACTTGCATCTCACTGGCGCGCGGGATTTCCAGATAATCTTGCCGAGCGGGCAGGATGTTCTACCGGCCGAAAGGATAGAGTAGGCAGACTGCACCGAGAAGTCGCCATTAGGTGCCGCCTTCCAGATCATAGAGTCAGTACTTCCGGGGTCGAGAGAAATCCCGGCGATCACGTCCCAGAGCGCAAGGTATTCCCCCATCGCTTGGACAGACAGGCCGCCCCTAATATCTGCAATCCAGGAGTTGTCGCAGAGAGCGGCAGCCACCGTGATGTCACTCAGCTTGACGAAGGAGAAAAGAATTGGGAATCTGTACTGCACTGATCCTCCGTCTGGCAACCAGCTGTCGCACCAAAACGAGGTAGAGGCTCCGTTCCCCAGCAGTACTTTGCTACCAGCGGCAAAGCAGTGCAGTGACTTTCTGTCAGCTAGAGGCGCAACGCGCATCCAAGGACGCTCTGGCTCAGCGCGGCGCAGCCAAATCCACCGAGTGCGAAGCGCAATTCCCATTAGGCATAGGTTTCTGATCCCTAGTCCCCCCTGCTCGATAGAGAGGCAAAGCTTCTCCCAAGCCACCAAGCTGCAAGAGCCCGCAGCATCTTCATCACCCTTCCAAAGGAAACCCCGGCATTTCTTCTCAATTTCGTTGATCGCCCAAGCTGGTAGTTCCAAGACGGACATGAAGTAGAGTGGGAGCAATGGCGCCAAGTTCATGTTTTTGCATATCAGAACTTGCTCGTTAGCTGCGCGTGATTAGGCTTCTGTTCTGTACTTCGTAATCTAGTATTAGCCAATGATTAAAAGCTCCAATCCAGCCTGTTCATACTTTATTATTAGTCATTTTTTTGTGCTTGTGTGTGTAATTTTCGTAGCCGTCTAGGATTGTTGGAATATTTATTTATGAAGACCTAAGTGTTCAAATCTTTTGCTCTGCTCGAATGGTCCAATTCTGATTGTACTGCACTTTGTGAAAAGTTCCAAAATTTAACATTACCTGATCTGCAACTTGATGTAGAGATGGCATCCGGACAAATGCTCATCCTCCAGCAGTGCAAAGCACATGGAGGAAGCCAAGGAGAAGTTCCAGGAGATCCAGGGCGCCTATTCCGGTCTTAATCTTCCTTATCTCAAACTCCACCCTGTTCTGTAATCACTTCACTTGTTACAACGATTATGCTACAGATAATGAACTGATCACAACCAAAGAAAACGGATTTAGCTAGTTGGCAAACTTATTGCATGGAGCCCTCGTGCTCCCATCCCATTGTTCTTGTGCAGTCCTCTCAGACTCAAACAAGCGGTTCCTCTACGACGTGGGGGTATATGATGATGACAACAATGACGATGACAACGTAAGGATTCTAGCCATAATTATGATTTATTGTCATTGTTGGTTCAACTTTAACTCCTACTGCCTCTGCTGCAGCTGCAGGGGATGGGGGACTTCATTGGTGAGATGGCCCAGATGATGAGCCAGGCACGGCCAACGGTAAGAACAGTTAGCACCTTGGTCCTAGTACTAGATGCTTCTCGTAGGCTCTAGCTGAGAGGTGGTACTGGTACATCAGGACCACAAATTTAGCTGCAACCGTGGTTGGCTAATTAGATCCCCTTTTGTGTTGTCATAATGCGTGATAGGTCCCAGCTAGCATTTATTACTTTCTATGTTCTTTTGACTAATCGTATTATCATATTTCGTTTCGAAAATTCTATCGCTGTATTTTGTAAGCACCATCATACCTGTTCTGTTCTGTCCTTTGCAAAAGTACGCTAAAATGGTTGAAAATTAACTTACTGCTTTTGGTCTGAGAAAACAAGTATACACATGGTAAATTATTGTGGTTTGTGGTTCTAGAACTCTCGTCATGATACCTCTGGTTCTCAGCGATGATTTTGCTACAGTTTATTGGGAATTCTATGCTATTTGGGGTTGCATGTCATTTGTCATGCATACAATCATTTCTTGTTCATTGGAATAACAAAAGAAAATGCTCATATATGAATGCTAAGTTATCAGAACTTCTCCAGGCTGTTTATCTGAAAAAACTTGTAAACTTTGGAAATTTTTGTATAGTTTATACTGGATATTGTTTGTTCTATGTTCATATGTCACAGGCTTAAAAAAGGAACTGTTATGAAAAGCTCCATGCCCCTCAACTGAAACTTTTAGGTGATTTTTTCTAGAACCAAGCTGGAAACCGGCCTCTTTTTCTCCTGGACCTGATGCATCCAAGATAAATATAACAATAGCAATAAAATAACAATGAATCATTGGATTTGCAGAGGCAGGAGAGCTTTGAAGAACTGCAGCAGCTATTCGTAGACATGTTCCAAGCTGATCTTGATTCGGGTTTCTGCAATGGACCCTCAAAGTGCTACCATACCCAGGCCCAAAGCCAGACTCGAACATCCTCAACCTCCCCTTCGACGTCACCGTCTCCACCGCCTCCAGTAGCTACTGAGGCAGAATCGCCATCATGTAATGGTATTAATAAGCGTGGTTCATCAGCAATGGACTCTGGGAAGCCTCCAAGAGCCAGCGAAGTCAGTGCTGGACAGAGTCAATCAGGGTTTTGTTTCGGGGTAAGTACGCATATGTCAATTTCTGTTTACTTGTTTGGTTTGGCAATAATGCATCTAGGTAGGCGCTGCTGTGATTACTTAATTACTGTGGTCTGATTAAGCAGACACTGTTGCTTATTGTTGATGGTGATCACCAAACAATTTGTGACTGGATCATGTGATACCTTTTTTGGGGTGCAAGTAACAGTTTATGCTATTTGGTGGAGGTGTGCTTTCTTCATCAAAGAATACAAGTTGCAGCTAGATTAGCTTGAGAAGCACGATTTCTCTTGAAAGGAATGTGCTGATAATGTGAAATCAACTTGACCTGCCGTTGATCACTGAACATGTTTTTTTTTTTTTAAAAAAAAGTGCTTAACGGCCAGGTGGTTTATTATTATTATTTTCTGAGGGAAGGGGTTTATGAATTTTGCTTAATAAGTTTAGGCATCAGATACCATACTTGTACTCTGGAATAGATTCCTTTGGCTAGCTTTGCTCTTTTTCACCGTATTGGGCAATACACTGTTTACATTTATTCAACATATTTATTCATTATTCCAATAAAGATTTGCTTTTTGGTAGAGCATTGTGGGGTCCTGGTTGTCTGGACCCACTAGATGTTTGGGCATATGCCATATGGGGCCATTCACTGGGATGTTGCACATAAGCCTTTTGCGGCCTTTTCATTTGTAATAATCATGAAATAATCCAGAAAGTTGTGGAGGATCCACCAAGTGAGTACGGATCCTAGCTCCACCACCAGATGTGCCATTCACATGAGGACTTGCTGATCAACTATGAGATTTCTGGATAGGGTCATTTGAATTTCCATCACTGTTACATCGTTGTTGTGTGGTCCGTATATGGAACAGTCTAGTGTGCTACCTTCTTCTGGTATATATTAAAATTGATTGCGATAGGATTTTTGTATATGCCTGGTACGGCATTTCTTGGTGGTGTTCTATGTCATTTAAGGATATCACAAGGTTTGGACGAGATTATGGCTTGTCTAGCATCTTAAATAGAGCCCATGCGTCATTTTCTGCTTTTCTGTATGTCCTTTCTTGGATTGCTACGTTGCCTTGTGCCTTTGCTGACTTGTTCAATTTGCTATTTTATTTTTGTAACACGCCTTTTTTGTGCAGCACTCCTGGTCCAACCTTAAATCTCCAACCAGATAAATGCTTATGATAAGGCCGTGTATTTGCTATTTCCTTTTAAGATTATCTGAAAATTCAGACTGGTGGTGCCAGTTGCGTGTGCTCGCACCAAACTTGCTGTGGTTCTGGTTACTTGGATGTCTTTGATAATTTAGTGCCCACGAGGAACAAAAAGTTCCGTTGTCGGATTCTTCCACTTGGATTCTTCCACTTTATGCTCTTTCTATAGTTCGCCTGGTTCTTCTGTAGCGATCCAATTGAGCCACACTTTTGATACGGTACTGATCATTTTGGCTGGTGCCTTTCTGCAGCAGAAGAGTGATGCTAAACAAGCGGCGAAGACGCGAAGCGGGAACACGGCCAGCCGGAGGAGGAACGGCCGGAAGCAGAAGGTGTCGTCGAAGCACGACGTCTCGTCTGAGGACGAGATGCCAGGTTCGCAGTGGCACGGCGTGGCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005481